RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 TIMM8BQ9Y5J9 83 aaPredicted RBP9.35□□□□□ -0.91
CPSF6-204ENST00000547486 DYNC1H1Q14204 4646 aaKnown RBP9.35□□□□□ -0.91
CPSF6-204ENST00000547486 PKD1P98161 4303 aa9.34□□□□□ -0.91
CPSF6-204ENST00000547486 H7BYZ3 331 aa9.34□□□□□ -0.91
CPSF6-204ENST00000547486 NUDT3O95989 172 aa9.34□□□□□ -0.91
CPSF6-204ENST00000547486 ATP5G1P05496 136 aa9.34□□□□□ -0.91
CPSF6-204ENST00000547486 CT45A10P0DMU9 189 aa9.34□□□□□ -0.91
CPSF6-204ENST00000547486 RPL29P47914 159 aaKnown RBP9.34□□□□□ -0.91
CPSF6-204ENST00000547486 ATP5G3P48201 142 aa9.34□□□□□ -0.91
CPSF6-204ENST00000547486 SULT1A1P50225 295 aa9.34□□□□□ -0.91
CPSF6-204ENST00000547486 S100A10P60903 97 aa9.34□□□□□ -0.91
CPSF6-204ENST00000547486 RAB32Q13637 225 aa9.34□□□□□ -0.91
CPSF6-204ENST00000547486 GFI1BQ5VTD9 330 aa9.34□□□□□ -0.91
CPSF6-204ENST00000547486 OR10J6PQ8NGY7 276 aa9.34□□□□□ -0.91
CPSF6-204ENST00000547486 LYRM2Q9NU23 88 aaPredicted RBP9.34□□□□□ -0.91
CPSF6-204ENST00000547486 SLC39A9Q9NUM3 307 aa9.34□□□□□ -0.91
CPSF6-204ENST00000547486 PXMP4Q9Y6I8 212 aa9.34□□□□□ -0.91
CPSF6-204ENST00000547486 UBE2L5PA0A1B0GUS4 154 aa9.33□□□□□ -0.92
CPSF6-204ENST00000547486 FAM240BA0A1B0GVZ2 78 aa9.33□□□□□ -0.92
CPSF6-204ENST00000547486 J3KRW8 73 aa9.33□□□□□ -0.92
CPSF6-204ENST00000547486 S100A11P31949 105 aa9.33□□□□□ -0.92
CPSF6-204ENST00000547486 C1orf134Q5TEV5 83 aa9.33□□□□□ -0.92
CPSF6-204ENST00000547486 ZNF493Q6ZR52 646 aa9.33□□□□□ -0.92
CPSF6-204ENST00000547486 OR1L4Q8NGR5 311 aa9.33□□□□□ -0.92
CPSF6-204ENST00000547486 ZNRF2Q8NHG8 242 aa9.33□□□□□ -0.92
CPSF6-204ENST00000547486 TMEM263Q8WUH6 116 aaKnown RBP9.33□□□□□ -0.92
CPSF6-204ENST00000547486 CHAC2Q8WUX2 184 aa9.33□□□□□ -0.92
CPSF6-204ENST00000547486 CCDC32Q9BV29 185 aa9.33□□□□□ -0.92
CPSF6-204ENST00000547486 TRAV12-3A0A0B4J271 114 aa9.32□□□□□ -0.92
CPSF6-204ENST00000547486 NPIPB6E9PJ23 425 aa9.32□□□□□ -0.92
CPSF6-204ENST00000547486 NDUFB4O95168 129 aa9.32□□□□□ -0.92
CPSF6-204ENST00000547486 PVALBP20472 110 aaPredicted RBP9.32□□□□□ -0.92
CPSF6-204ENST00000547486 FAM3BP58499 235 aaPredicted RBP9.32□□□□□ -0.92
CPSF6-204ENST00000547486 BAXQ07812 192 aa9.32□□□□□ -0.92
CPSF6-204ENST00000547486 GUK1Q16774 197 aa9.32□□□□□ -0.92
CPSF6-204ENST00000547486 LINC00612Q8N6U2 182 aa9.32□□□□□ -0.92
CPSF6-204ENST00000547486 RNF141Q8WVD5 230 aa9.32□□□□□ -0.92
CPSF6-204ENST00000547486 C20orf144Q9BQM9 153 aa9.32□□□□□ -0.92
CPSF6-204ENST00000547486 ATG101Q9BSB4 218 aa9.32□□□□□ -0.92
CPSF6-204ENST00000547486 NACAE9PAV3 2078 aa9.32□□□□□ -0.92
CPSF6-204ENST00000547486 TRBV19A0A075B6N1 114 aa9.31□□□□□ -0.92
CPSF6-204ENST00000547486 M0R3E3 92 aa9.31□□□□□ -0.92
CPSF6-204ENST00000547486 MED14OSP0DP75 135 aa9.31□□□□□ -0.92
CPSF6-204ENST00000547486 FGF7P21781 194 aa9.31□□□□□ -0.92
CPSF6-204ENST00000547486 NHLH2Q02577 135 aa9.31□□□□□ -0.92
CPSF6-204ENST00000547486 ERCC8Q13216 396 aa9.31□□□□□ -0.92
CPSF6-204ENST00000547486 GCSAMLQ5JQS6 135 aa9.31□□□□□ -0.92
CPSF6-204ENST00000547486 PFDN5Q99471 154 aa9.31□□□□□ -0.92
CPSF6-204ENST00000547486 LINC00588Q9Y4M8 146 aa9.31□□□□□ -0.92
CPSF6-204ENST00000547486 DNAH11Q96DT5 4516 aa9.31□□□□□ -0.92
CPSF6-204ENST00000547486 GAGE12BA1L429 117 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 ZNF253O75346 499 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 GAGE7O76087 117 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 SIX6O95475 246 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 GAGE12FP0CL80 117 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 GAGE12GP0CL81 117 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 GAGE12IP0CL82 117 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 PYYP10082 97 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 HOXA5P20719 270 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 HBG1P69891 147 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 HBG2P69892 147 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 SOHLH1Q5JUK2 328 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 MZT2BQ6NZ67 158 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 STX12Q86Y82 276 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 CCDC28AQ8IWP9 274 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 ODF3Q96PU9 254 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 GPN1Q9HCN4 374 aaPredicted RBP9.3□□□□□ -0.92
CPSF6-204ENST00000547486 TMEM14CQ9P0S9 112 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 RYR1P21817 5038 aa9.3□□□□□ -0.92
CPSF6-204ENST00000547486 TRAV26-1A0A087WT03 109 aa9.29□□□□□ -0.92
CPSF6-204ENST00000547486 NBDYA0A0U1RRE5 68 aa9.29□□□□□ -0.92
CPSF6-204ENST00000547486 HIST1H1EP10412 219 aaKnown RBP9.29□□□□□ -0.92
CPSF6-204ENST00000547486 LEPP41159 167 aa9.29□□□□□ -0.92
CPSF6-204ENST00000547486 CCL18P55774 89 aa9.29□□□□□ -0.92
CPSF6-204ENST00000547486 ASAH1Q13510 395 aa9.29□□□□□ -0.92
CPSF6-204ENST00000547486 OR5I1Q13606 314 aa9.29□□□□□ -0.92
CPSF6-204ENST00000547486 ATP6V1FQ16864 119 aa9.29□□□□□ -0.92
CPSF6-204ENST00000547486 ZNF575Q86XF7 245 aa9.29□□□□□ -0.92
CPSF6-204ENST00000547486 EXOC3-AS1Q8N2X6 119 aa9.29□□□□□ -0.92
CPSF6-204ENST00000547486 THAP6Q8TBB0 222 aa9.29□□□□□ -0.92
CPSF6-204ENST00000547486 NPCDR1Q9BY65 106 aa9.29□□□□□ -0.92
CPSF6-204ENST00000547486 AGPAT4-IT1Q9H0P7 198 aa9.29□□□□□ -0.92
CPSF6-204ENST00000547486 A0A0J9YY99 117 aa9.28□□□□□ -0.92
CPSF6-204ENST00000547486 H0YIZ8 118 aa9.28□□□□□ -0.92
CPSF6-204ENST00000547486 ZNF324O75467 553 aaPredicted RBP9.28□□□□□ -0.92
CPSF6-204ENST00000547486 IFITM3Q01628 133 aa9.28□□□□□ -0.92
CPSF6-204ENST00000547486 TNP2Q05952 138 aa9.28□□□□□ -0.92
CPSF6-204ENST00000547486 CD300CQ08708 224 aa9.28□□□□□ -0.92
CPSF6-204ENST00000547486 LINC00299Q6ZSB3 139 aa9.28□□□□□ -0.92
CPSF6-204ENST00000547486 SSX7Q7RTT5 188 aa9.28□□□□□ -0.92
CPSF6-204ENST00000547486 BLNKQ8WV28 456 aa9.28□□□□□ -0.92
CPSF6-204ENST00000547486 MRPL53Q96EL3 112 aaKnown RBP9.28□□□□□ -0.92
CPSF6-204ENST00000547486 FAM167A-AS1Q96KT0 104 aa9.28□□□□□ -0.92
CPSF6-204ENST00000547486 FAM19A4Q96LR4 140 aa9.28□□□□□ -0.92
CPSF6-204ENST00000547486 SLC25A2Q9BXI2 301 aa9.28□□□□□ -0.92
CPSF6-204ENST00000547486 OR5AC2Q9NZP5 309 aa9.28□□□□□ -0.92
CPSF6-204ENST00000547486 MPDU1O75352 247 aa9.27□□□□□ -0.93
CPSF6-204ENST00000547486 RLN2P04090 185 aa9.27□□□□□ -0.93
CPSF6-204ENST00000547486 Q6ZQT7 251 aa9.27□□□□□ -0.93
CPSF6-204ENST00000547486 Q6ZTI0 123 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms