RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 CPAMD8Q8IZJ3 1885 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 CENPEQ02224 2701 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 IGHV3-15A0A0B4J1V0 119 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 C7orf77A4D0Y5 90 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 SEC14L6B5MCN3 397 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 F6UZH7 168 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 TMEM250H0YL14 139 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 GATCO43716 136 aaKnown RBP3.42□□□□□ -1.86
NPAS3-204ENST00000546849 SSSCA1O60232 199 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 NAPSAO96009 420 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 MMP7P09237 267 aaPredicted RBP3.42□□□□□ -1.86
NPAS3-204ENST00000546849 METTL15P1P0C7V9 234 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 LOXP28300 417 aaPredicted RBP3.42□□□□□ -1.86
NPAS3-204ENST00000546849 OPRM1P35372 400 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 SAPCD1Q5SSQ6 148 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 C16orf47Q6ZP98 133 aaPredicted RBP3.42□□□□□ -1.86
NPAS3-204ENST00000546849 LYZL2Q7Z4W2 148 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 GAPTQ8N292 157 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 ZIC4Q8N9L1 334 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 ZFP62Q8NB50 900 aaPredicted RBP3.42□□□□□ -1.86
NPAS3-204ENST00000546849 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.42□□□□□ -1.86
NPAS3-204ENST00000546849 OR5T1Q8NG75 326 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 OR11L1Q8NGX0 322 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 OR51H1Q8NH63 302 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 SFT2D1Q8WV19 159 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 OR5P3Q8WZ94 311 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 ADAT1Q9BUB4 502 aaKnown RBP3.42□□□□□ -1.86
NPAS3-204ENST00000546849 CHCHD7Q9BUK0 85 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 TMEM147Q9BVK8 224 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 TTTY12Q9BZ98 90 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 TLNRD1Q9H1K6 362 aa3.42□□□□□ -1.86
NPAS3-204ENST00000546849 METTL1Q9UBP6 276 aaKnown RBP3.42□□□□□ -1.86
NPAS3-204ENST00000546849 UTP20O75691 2785 aaKnown RBP3.42□□□□□ -1.86
NPAS3-204ENST00000546849 TRAV9-1A0A075B6T8 112 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 CTXND1A0A1B0GTU2 59 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 IQCF6A8MYZ5 107 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 PPP5D1E7EU14 171 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 TSTD3H0UI37 97 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 ITGB1BP1O14713 200 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 PGLYRP1O75594 196 aaPredicted RBP3.41□□□□□ -1.86
NPAS3-204ENST00000546849 SCO1O75880 301 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 HRASP01112 189 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 CCL4P13236 92 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 CD99P14209 185 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 CBR1P16152 277 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 ATP6V0CP27449 155 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 LPAR6P43657 344 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 CLDN18P56856 261 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 TAS2R45P59539 299 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 PIGYQ3MUY2 71 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 AKIRIN2Q53H80 203 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 FAM162BQ5T6X4 162 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 Q6ZT83 130 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 SELENOHQ8IZQ5 122 aaKnown RBP3.41□□□□□ -1.86
NPAS3-204ENST00000546849 C22orf15Q8WYQ4 148 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 IMMP2LQ96T52 175 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 C12orf57Q99622 126 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 SFXN3Q9BWM7 321 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 SMIM3Q9BZL3 60 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 NAT8Q9UHE5 227 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 JPT1Q9UK76 154 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 SIGLEC9Q9Y336 463 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 PUS1Q9Y606 427 aaKnown RBP eCLIP3.41□□□□□ -1.86
NPAS3-204ENST00000546849 U3KQA8 63 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 ATMQ13315 3056 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 PCNX2A6NKB5 2137 aa3.41□□□□□ -1.86
NPAS3-204ENST00000546849 ICE1Q9Y2F5 2266 aa3.4□□□□□ -1.86
NPAS3-204ENST00000546849 IGHV3-72A0A0B4J1Y9 119 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 ZNF98A6NK75 572 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 CEBPZOSA8MTT3 80 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 ZNF727A8MUV8 499 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 FNDC10F2Z333 226 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 SIVA1O15304 175 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 ZNF737O75373 536 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 HAND1O96004 215 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 IFNA10P01566 189 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 STAG3L2P0CL84 134 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 BCL2P10415 239 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 SRP14P37108 136 aaKnown RBP3.4□□□□□ -1.87
NPAS3-204ENST00000546849 UBE2E1P51965 193 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 LCN2P80188 198 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 AKR1C1Q04828 323 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 SLC38A11Q08AI6 406 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 TMEM241Q24JQ0 296 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 RPEL1Q2QD12 228 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 TMEM249Q2WGJ8 235 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 SP6Q3SY56 376 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 NMSQ5H8A3 153 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 ZNF818PQ6ZRF7 136 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 TMEM251Q8N6I4 163 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 VSTM2AQ8TAG5 236 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 MBD3L1Q8WWY6 194 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 ISOC2Q96AB3 205 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 ACY3Q96HD9 319 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 AGMATQ9BSE5 352 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 SAMD10Q9BYL1 202 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 OR2J1Q9GZK6 312 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 OR51I2Q9H344 312 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 PROK2Q9HC23 129 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms