RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 C10orf113Q5VZT2 155 aa12.97□□□□□ -0.33
CHERP-204ENST00000546538 ZNF493Q6ZR52 646 aa12.97□□□□□ -0.33
CHERP-204ENST00000546538 SEC22CQ9BRL7 303 aa12.97□□□□□ -0.33
CHERP-204ENST00000546538 FAM24AA6NFZ4 105 aa12.96□□□□□ -0.33
CHERP-204ENST00000546538 CENPXA8MT69 81 aa12.96□□□□□ -0.33
CHERP-204ENST00000546538 CAMLGP49069 296 aa12.96□□□□□ -0.33
CHERP-204ENST00000546538 NRARPQ7Z6K4 114 aa12.96□□□□□ -0.33
CHERP-204ENST00000546538 S100A7AQ86SG5 101 aa12.96□□□□□ -0.33
CHERP-204ENST00000546538 ZNF586Q9NXT0 402 aa12.96□□□□□ -0.33
CHERP-204ENST00000546538 LSM5Q9Y4Y9 91 aaKnown RBP12.96□□□□□ -0.33
CHERP-204ENST00000546538 TRAV6A0A075B6T7 132 aa12.96□□□□□ -0.34
CHERP-204ENST00000546538 IL15RAQ13261 267 aa12.96□□□□□ -0.34
CHERP-204ENST00000546538 VWC2Q2TAL6 325 aa12.96□□□□□ -0.34
CHERP-204ENST00000546538 C6orf223Q8N319 242 aa12.96□□□□□ -0.34
CHERP-204ENST00000546538 C20orf144Q9BQM9 153 aa12.96□□□□□ -0.34
CHERP-204ENST00000546538 DNAJC4Q9NNZ3 241 aa12.96□□□□□ -0.34
CHERP-204ENST00000546538 WDR83OSQ9Y284 106 aa12.96□□□□□ -0.34
CHERP-204ENST00000546538 TRAV26-1A0A087WT03 109 aa12.95□□□□□ -0.34
CHERP-204ENST00000546538 NPIPB6E9PJ23 425 aa12.95□□□□□ -0.34
CHERP-204ENST00000546538 J3KRW8 73 aa12.95□□□□□ -0.34
CHERP-204ENST00000546538 LYRM1O43325 122 aa12.95□□□□□ -0.34
CHERP-204ENST00000546538 TCRBP04435 133 aa12.95□□□□□ -0.34
CHERP-204ENST00000546538 SSX7Q7RTT5 188 aa12.95□□□□□ -0.34
CHERP-204ENST00000546538 RNF24Q9Y225 148 aa12.95□□□□□ -0.34
CHERP-204ENST00000546538 IGSF23A1L1A6 192 aa12.94□□□□□ -0.34
CHERP-204ENST00000546538 FAM25EA8MYX2 175 aa12.94□□□□□ -0.34
CHERP-204ENST00000546538 CCL18P55774 89 aa12.94□□□□□ -0.34
CHERP-204ENST00000546538 OR10J6PQ8NGY7 276 aa12.94□□□□□ -0.34
CHERP-204ENST00000546538 ZNF431Q8TF32 576 aaPredicted RBP12.94□□□□□ -0.34
CHERP-204ENST00000546538 PXMP4Q9Y6I8 212 aa12.94□□□□□ -0.34
CHERP-204ENST00000546538 TRAV12-3A0A0B4J271 114 aa12.93□□□□□ -0.34
CHERP-204ENST00000546538 GAGE12BA1L429 117 aa12.93□□□□□ -0.34
CHERP-204ENST00000546538 L7N2F9 121 aa12.93□□□□□ -0.34
CHERP-204ENST00000546538 M0R3E3 92 aa12.93□□□□□ -0.34
CHERP-204ENST00000546538 GAGE7O76087 117 aa12.93□□□□□ -0.34
CHERP-204ENST00000546538 GAGE12FP0CL80 117 aa12.93□□□□□ -0.34
CHERP-204ENST00000546538 GAGE12GP0CL81 117 aa12.93□□□□□ -0.34
CHERP-204ENST00000546538 GAGE12IP0CL82 117 aa12.93□□□□□ -0.34
CHERP-204ENST00000546538 BCAP31P51572 246 aa12.93□□□□□ -0.34
CHERP-204ENST00000546538 CAV2P51636 162 aa12.93□□□□□ -0.34
CHERP-204ENST00000546538 VAMP2P63027 116 aa12.93□□□□□ -0.34
CHERP-204ENST00000546538 CNPY1Q3B7I2 92 aa12.93□□□□□ -0.34
CHERP-204ENST00000546538 NUDT15Q9NV35 164 aa12.93□□□□□ -0.34
CHERP-204ENST00000546538 A0A0J9YY99 117 aa12.92□□□□□ -0.34
CHERP-204ENST00000546538 NDUFB4O95168 129 aa12.92□□□□□ -0.34
CHERP-204ENST00000546538 OR5I1Q13606 314 aa12.92□□□□□ -0.34
CHERP-204ENST00000546538 ODF3Q96PU9 254 aa12.92□□□□□ -0.34
CHERP-204ENST00000546538 UQCC1Q9NVA1 299 aa12.92□□□□□ -0.34
CHERP-204ENST00000546538 UBE2L5PA0A1B0GUS4 154 aa12.91□□□□□ -0.34
CHERP-204ENST00000546538 M6PRP20645 277 aa12.91□□□□□ -0.34
CHERP-204ENST00000546538 ERCC8Q13216 396 aa12.91□□□□□ -0.34
CHERP-204ENST00000546538 ZNF846Q147U1 533 aa12.91□□□□□ -0.34
CHERP-204ENST00000546538 ESRGQ1W209 222 aa12.91□□□□□ -0.34
CHERP-204ENST00000546538 GCSAMLQ5JQS6 135 aa12.91□□□□□ -0.34
CHERP-204ENST00000546538 Q6ZTI0 123 aa12.91□□□□□ -0.34
CHERP-204ENST00000546538 RXFP4Q8TDU9 374 aa12.91□□□□□ -0.34
CHERP-204ENST00000546538 FAM19A4Q96LR4 140 aa12.91□□□□□ -0.34
CHERP-204ENST00000546538 C2orf50Q96LR7 162 aa12.91□□□□□ -0.34
CHERP-204ENST00000546538 TMPRSS5Q9H3S3 457 aa12.91□□□□□ -0.34
CHERP-204ENST00000546538 LYRM2Q9NU23 88 aaPredicted RBP12.91□□□□□ -0.34
CHERP-204ENST00000546538 SLC39A9Q9NUM3 307 aa12.91□□□□□ -0.34
CHERP-204ENST00000546538 TRBV19A0A075B6N1 114 aa12.9□□□□□ -0.34
CHERP-204ENST00000546538 C5orf51A6NDU8 294 aa12.9□□□□□ -0.34
CHERP-204ENST00000546538 C16orf90A8MZG2 172 aa12.9□□□□□ -0.34
CHERP-204ENST00000546538 RPL29P47914 159 aaKnown RBP12.9□□□□□ -0.34
CHERP-204ENST00000546538 Q6ZRG5 221 aa12.9□□□□□ -0.34
CHERP-204ENST00000546538 C12orf45Q8N5I9 185 aaPredicted RBP12.9□□□□□ -0.34
CHERP-204ENST00000546538 TMEM252Q8N6L7 170 aa12.9□□□□□ -0.34
CHERP-204ENST00000546538 C11orf72Q8NBR9 251 aa12.9□□□□□ -0.34
CHERP-204ENST00000546538 GNPNAT1Q96EK6 184 aaPredicted RBP12.9□□□□□ -0.34
CHERP-204ENST00000546538 Q9H8V8 135 aa12.9□□□□□ -0.34
CHERP-204ENST00000546538 PTTG2Q9NZH5 202 aa12.9□□□□□ -0.34
CHERP-204ENST00000546538 ZNF253O75346 499 aa12.89□□□□□ -0.35
CHERP-204ENST00000546538 SULT1A1P50225 295 aa12.89□□□□□ -0.35
CHERP-204ENST00000546538 CD300CQ08708 224 aa12.89□□□□□ -0.35
CHERP-204ENST00000546538 RAB32Q13637 225 aa12.89□□□□□ -0.35
CHERP-204ENST00000546538 CLINT1Q14677 625 aa12.89□□□□□ -0.35
CHERP-204ENST00000546538 GUK1Q16774 197 aa12.89□□□□□ -0.35
CHERP-204ENST00000546538 OR1L4Q8NGR5 311 aa12.89□□□□□ -0.35
CHERP-204ENST00000546538 CHAC2Q8WUX2 184 aa12.89□□□□□ -0.35
CHERP-204ENST00000546538 ZNF503Q96F45 646 aa12.89□□□□□ -0.35
CHERP-204ENST00000546538 VSIG2Q96IQ7 327 aa12.89□□□□□ -0.35
CHERP-204ENST00000546538 KLLNB2CW77 178 aa12.88□□□□□ -0.35
CHERP-204ENST00000546538 ZNF324O75467 553 aaPredicted RBP12.88□□□□□ -0.35
CHERP-204ENST00000546538 RLN2P04090 185 aa12.88□□□□□ -0.35
CHERP-204ENST00000546538 PYYP10082 97 aa12.88□□□□□ -0.35
CHERP-204ENST00000546538 LEPP41159 167 aa12.88□□□□□ -0.35
CHERP-204ENST00000546538 DAZ2Q13117 558 aaKnown RBP12.88□□□□□ -0.35
CHERP-204ENST00000546538 Q6ZQT7 251 aa12.88□□□□□ -0.35
CHERP-204ENST00000546538 CCDC28AQ8IWP9 274 aa12.88□□□□□ -0.35
CHERP-204ENST00000546538 S100A10P60903 97 aa12.88□□□□□ -0.35
CHERP-204ENST00000546538 BAXQ07812 192 aa12.88□□□□□ -0.35
CHERP-204ENST00000546538 BTN1A1Q13410 526 aa12.88□□□□□ -0.35
CHERP-204ENST00000546538 RAB31Q13636 194 aa12.88□□□□□ -0.35
CHERP-204ENST00000546538 PRR9Q5T870 116 aa12.88□□□□□ -0.35
CHERP-204ENST00000546538 PFDN5Q99471 154 aa12.88□□□□□ -0.35
CHERP-204ENST00000546538 PYGO2Q9BRQ0 406 aa12.88□□□□□ -0.35
CHERP-204ENST00000546538 UPK3BQ9BT76 320 aa12.88□□□□□ -0.35
CHERP-204ENST00000546538 AGPAT4-IT1Q9H0P7 198 aa12.88□□□□□ -0.35
CHERP-204ENST00000546538 GSN-AS1Q9NRJ2 163 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms