RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 LOC105371242A0A075B767 164 aa11.92□□□□□ -0.5
CNN3-207ENST00000545882 TMEM189A5PLL7 270 aa11.92□□□□□ -0.5
CNN3-207ENST00000545882 HSBP1L1C9JCN9 74 aa11.92□□□□□ -0.5
CNN3-207ENST00000545882 D6R8Y8 96 aa11.92□□□□□ -0.5
CNN3-207ENST00000545882 IGHG4P01861 327 aa11.92□□□□□ -0.5
CNN3-207ENST00000545882 CT45A10P0DMU9 189 aa11.92□□□□□ -0.5
CNN3-207ENST00000545882 FAM104BQ5XKR9 115 aa11.92□□□□□ -0.5
CNN3-207ENST00000545882 FA2HQ7L5A8 372 aa11.92□□□□□ -0.5
CNN3-207ENST00000545882 Q8N6K4 173 aa11.92□□□□□ -0.5
CNN3-207ENST00000545882 PSMG3-AS1Q96PY0 264 aa11.92□□□□□ -0.5
CNN3-207ENST00000545882 SIGLEC8Q9NYZ4 499 aa11.92□□□□□ -0.5
CNN3-207ENST00000545882 RELNP78509 3460 aa11.91□□□□□ -0.5
CNN3-207ENST00000545882 IGHV2-70DA0A0C4DH43 119 aa11.91□□□□□ -0.5
CNN3-207ENST00000545882 CCL21O00585 134 aa11.91□□□□□ -0.5
CNN3-207ENST00000545882 ADORA2A-AS1P86434 159 aa11.91□□□□□ -0.5
CNN3-207ENST00000545882 AMN1Q8IY45 258 aa11.91□□□□□ -0.5
CNN3-207ENST00000545882 OR10AG1Q8NH19 301 aa11.91□□□□□ -0.5
CNN3-207ENST00000545882 C21orf62Q9NYP8 219 aa11.91□□□□□ -0.5
CNN3-207ENST00000545882 ANKHD1Q8IWZ3 2542 aaKnown RBP11.91□□□□□ -0.5
CNN3-207ENST00000545882 SERTM2A0A1B0GWG4 89 aa11.9□□□□□ -0.5
CNN3-207ENST00000545882 EGR2P11161 476 aaPredicted RBP11.9□□□□□ -0.5
CNN3-207ENST00000545882 ZNF80P51504 273 aaPredicted RBP11.9□□□□□ -0.5
CNN3-207ENST00000545882 PSG9Q00887 426 aa11.9□□□□□ -0.5
CNN3-207ENST00000545882 KLRB1Q12918 225 aa11.9□□□□□ -0.5
CNN3-207ENST00000545882 PRR25Q96S07 402 aa11.9□□□□□ -0.5
CNN3-207ENST00000545882 MUC21A0A0G2JKD1 596 aa11.9□□□□□ -0.51
CNN3-207ENST00000545882 MUC21A0A140T8X8 626 aa11.9□□□□□ -0.51
CNN3-207ENST00000545882 LOC389332A0A1B0GUA5 103 aa11.9□□□□□ -0.51
CNN3-207ENST00000545882 CTSGP08311 255 aa11.9□□□□□ -0.51
CNN3-207ENST00000545882 PAX8Q06710 450 aa11.9□□□□□ -0.51
CNN3-207ENST00000545882 MRPL51Q4U2R6 128 aaKnown RBP11.9□□□□□ -0.51
CNN3-207ENST00000545882 MUC21Q5SSG8 566 aa11.9□□□□□ -0.51
CNN3-207ENST00000545882 C2orf91Q6ZV80 131 aa11.9□□□□□ -0.51
CNN3-207ENST00000545882 ERASQ7Z444 233 aa11.9□□□□□ -0.51
CNN3-207ENST00000545882 RNASE8Q8TDE3 154 aaKnown RBP11.9□□□□□ -0.51
CNN3-207ENST00000545882 HRNRQ86YZ3 2850 aaPredicted RBP11.89□□□□□ -0.51
CNN3-207ENST00000545882 OR2T8A6NH00 312 aa11.89□□□□□ -0.51
CNN3-207ENST00000545882 HLA-DMBP28068 263 aa11.89□□□□□ -0.51
CNN3-207ENST00000545882 CSN1S1P47710 185 aa11.89□□□□□ -0.51
CNN3-207ENST00000545882 IGFL4Q6B9Z1 124 aa11.89□□□□□ -0.51
CNN3-207ENST00000545882 C11orf71Q6IPW1 123 aa11.89□□□□□ -0.51
CNN3-207ENST00000545882 VMO1Q7Z5L0 202 aa11.89□□□□□ -0.51
CNN3-207ENST00000545882 S100A7AQ86SG5 101 aa11.89□□□□□ -0.51
CNN3-207ENST00000545882 DEFB125Q8N687 156 aa11.89□□□□□ -0.51
CNN3-207ENST00000545882 PRELID3AQ96N28 172 aa11.89□□□□□ -0.51
CNN3-207ENST00000545882 VGLL1Q99990 258 aa11.89□□□□□ -0.51
CNN3-207ENST00000545882 A0A087X0K7 114 aa11.88□□□□□ -0.51
CNN3-207ENST00000545882 NCBP2LA6PVI3 153 aaKnown RBP11.88□□□□□ -0.51
CNN3-207ENST00000545882 COX8AP10176 69 aa11.88□□□□□ -0.51
CNN3-207ENST00000545882 EBI3Q14213 229 aa11.88□□□□□ -0.51
CNN3-207ENST00000545882 ARL6IP6Q8N6S5 226 aa11.88□□□□□ -0.51
CNN3-207ENST00000545882 Q8TAT8 98 aa11.88□□□□□ -0.51
CNN3-207ENST00000545882 RPL7P18124 248 aaKnown RBP11.88□□□□□ -0.51
CNN3-207ENST00000545882 NHLH1Q02575 133 aa11.88□□□□□ -0.51
CNN3-207ENST00000545882 TIMD4Q96H15 378 aa11.88□□□□□ -0.51
CNN3-207ENST00000545882 CBY1Q9Y3M2 126 aa11.88□□□□□ -0.51
CNN3-207ENST00000545882 IGLC6P0CF74 106 aa11.87□□□□□ -0.51
CNN3-207ENST00000545882 FXYD7P58549 80 aa11.87□□□□□ -0.51
CNN3-207ENST00000545882 HIST1H1AQ02539 215 aaPredicted RBP11.87□□□□□ -0.51
CNN3-207ENST00000545882 SAPCD1Q5SSQ6 148 aa11.87□□□□□ -0.51
CNN3-207ENST00000545882 C12orf54Q6X4T0 127 aa11.87□□□□□ -0.51
CNN3-207ENST00000545882 ORMDL3Q8N138 153 aa11.87□□□□□ -0.51
CNN3-207ENST00000545882 CSMD1Q96PZ7 3565 aa11.87□□□□□ -0.51
CNN3-207ENST00000545882 IGHV7-81A0A0B4J1V7 117 aa11.86□□□□□ -0.51
CNN3-207ENST00000545882 K7EP13 123 aa11.86□□□□□ -0.51
CNN3-207ENST00000545882 FGF6P10767 208 aa11.86□□□□□ -0.51
CNN3-207ENST00000545882 RHOGP84095 191 aa11.86□□□□□ -0.51
CNN3-207ENST00000545882 ANKRD39Q53RE8 183 aa11.86□□□□□ -0.51
CNN3-207ENST00000545882 OR8A1Q8NGG7 326 aa11.86□□□□□ -0.51
CNN3-207ENST00000545882 SMKR1H3BMG3 65 aa11.86□□□□□ -0.51
CNN3-207ENST00000545882 NPYP01303 97 aa11.86□□□□□ -0.51
CNN3-207ENST00000545882 ZFP36P26651 326 aaKnown RBP11.86□□□□□ -0.51
CNN3-207ENST00000545882 GPR183P32249 361 aa11.86□□□□□ -0.51
CNN3-207ENST00000545882 RABAC1Q9UI14 185 aa11.86□□□□□ -0.51
CNN3-207ENST00000545882 IGHV3OR16-8A0A075B7F1 116 aa11.85□□□□□ -0.51
CNN3-207ENST00000545882 SNAI2O43623 268 aa11.85□□□□□ -0.51
CNN3-207ENST00000545882 C1orf122Q6ZSJ8 110 aa11.85□□□□□ -0.51
CNN3-207ENST00000545882 THYN1Q9P016 225 aa11.85□□□□□ -0.51
CNN3-207ENST00000545882 WNK2Q9Y3S1 2297 aa11.85□□□□□ -0.51
CNN3-207ENST00000545882 IGF2RP11717 2491 aa11.85□□□□□ -0.51
CNN3-207ENST00000545882 RBX1P62877 108 aa11.84□□□□□ -0.51
CNN3-207ENST00000545882 VAMP3Q15836 100 aa11.84□□□□□ -0.51
CNN3-207ENST00000545882 CCDC144NLQ6NUI1 221 aa11.84□□□□□ -0.51
CNN3-207ENST00000545882 Q8N9W7 124 aa11.84□□□□□ -0.51
CNN3-207ENST00000545882 FER1L6-AS1Q8NA97 138 aa11.84□□□□□ -0.51
CNN3-207ENST00000545882 IGHV3-35A0A0C4DH35 117 aa11.84□□□□□ -0.51
CNN3-207ENST00000545882 FBLL1A6NHQ2 334 aaKnown RBP11.84□□□□□ -0.51
CNN3-207ENST00000545882 CBY3A6NI87 242 aa11.84□□□□□ -0.51
CNN3-207ENST00000545882 OOSP1A8MZH6 123 aa11.84□□□□□ -0.51
CNN3-207ENST00000545882 CD5LO43866 347 aa11.84□□□□□ -0.51
CNN3-207ENST00000545882 TMEM11P17152 192 aa11.84□□□□□ -0.51
CNN3-207ENST00000545882 LGALS9BQ3B8N2 356 aa11.84□□□□□ -0.51
CNN3-207ENST00000545882 LGALS9CQ6DKI2 356 aa11.84□□□□□ -0.51
CNN3-207ENST00000545882 DPF1Q92782 380 aa11.84□□□□□ -0.51
CNN3-207ENST00000545882 RNF185Q96GF1 192 aa11.84□□□□□ -0.51
CNN3-207ENST00000545882 MSRB1Q9NZV6 116 aa11.84□□□□□ -0.51
CNN3-207ENST00000545882 PRAC2D3DTV9 90 aa11.83□□□□□ -0.52
CNN3-207ENST00000545882 RPS20P60866 119 aaKnown RBP11.83□□□□□ -0.52
CNN3-207ENST00000545882 SRSF2Q01130 221 aaKnown RBP11.83□□□□□ -0.52
CNN3-207ENST00000545882 TWIST1Q15672 202 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms