RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 IGFL4Q6B9Z1 124 aa10.02□□□□□ -0.81
COL4A6-209ENST00000545689 COX11Q9Y6N1 276 aa10.02□□□□□ -0.81
COL4A6-209ENST00000545689 LINC00158P58513 81 aa10.02□□□□□ -0.81
COL4A6-209ENST00000545689 PGPEP1Q9NXJ5 209 aa10.02□□□□□ -0.81
COL4A6-209ENST00000545689 SMKR1H3BMG3 65 aa10.02□□□□□ -0.81
COL4A6-209ENST00000545689 C8orf49Q96NF6 230 aa10.02□□□□□ -0.81
COL4A6-209ENST00000545689 TRGV1A0A0A0MS02 117 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 ZNF134P52741 427 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 FXYD5Q96DB9 178 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 TIMM21Q9BVV7 248 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 H3BUA1 57 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 OVOL3O00110 214 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 C1orf122Q6ZSJ8 110 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 PIP4P1Q86T03 277 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 WIPF2Q8TF74 440 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-209ENST00000545689 PRR25Q96S07 402 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 FAM215AQ9Y5M1 114 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 ESDP10768 282 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 SRSF2Q01130 221 aaKnown RBP10.01□□□□□ -0.81
COL4A6-209ENST00000545689 SVILO95425 2214 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 J3QLI3 93 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 LGALS9BQ3B8N2 356 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 TMEM95Q3KNT9 176 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 LGALS9CQ6DKI2 356 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 NSUN5P1Q3KNT7 163 aa10.01□□□□□ -0.81
COL4A6-209ENST00000545689 TMEM213A2RRL7 107 aa10□□□□□ -0.81
COL4A6-209ENST00000545689 CKS1BP61024 79 aa10□□□□□ -0.81
COL4A6-209ENST00000545689 DPH3Q96FX2 82 aa10□□□□□ -0.81
COL4A6-209ENST00000545689 IGHV3-64A0A075B6Q5 118 aa10□□□□□ -0.81
COL4A6-209ENST00000545689 LYPD6Q86Y78 171 aa10□□□□□ -0.81
COL4A6-209ENST00000545689 IGHV2-70P01814 119 aa10□□□□□ -0.81
COL4A6-209ENST00000545689 IGLC1P0CG04 106 aa10□□□□□ -0.81
COL4A6-209ENST00000545689 IGF2-ASQ6U949 168 aa10□□□□□ -0.81
COL4A6-209ENST00000545689 SFTA2Q6UW10 78 aa10□□□□□ -0.81
COL4A6-209ENST00000545689 LTAP01374 205 aa10□□□□□ -0.81
COL4A6-209ENST00000545689 FXYD7P58549 80 aa10□□□□□ -0.81
COL4A6-209ENST00000545689 ANAPC13Q9BS18 74 aa10□□□□□ -0.81
COL4A6-209ENST00000545689 DUX4L9Q6RFH8 374 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-209ENST00000545689 IGFL2Q6UWQ7 119 aa9.99□□□□□ -0.81
COL4A6-209ENST00000545689 C8orf86Q6ZUL3 223 aa9.99□□□□□ -0.81
COL4A6-209ENST00000545689 KLHL30-AS1Q8NEE0 82 aa9.99□□□□□ -0.81
COL4A6-209ENST00000545689 EREGO14944 169 aa9.99□□□□□ -0.81
COL4A6-209ENST00000545689 MRPL53Q96EL3 112 aaKnown RBP9.99□□□□□ -0.81
COL4A6-209ENST00000545689 PLXNB3Q9ULL4 1909 aa9.99□□□□□ -0.81
COL4A6-209ENST00000545689 MRPL51Q4U2R6 128 aaKnown RBP9.99□□□□□ -0.81
COL4A6-209ENST00000545689 LEPROTO15243 131 aa9.99□□□□□ -0.81
COL4A6-209ENST00000545689 Q6ZWC4 215 aa9.99□□□□□ -0.81
COL4A6-209ENST00000545689 C11orf53Q8IXP5 236 aa9.99□□□□□ -0.81
COL4A6-209ENST00000545689 SDK2Q58EX2 2172 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 IGLC2P0DOY2 106 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 IGLC3P0DOY3 106 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 ZNF114Q8NC26 417 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 PYGO2Q9BRQ0 406 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 SLAQ13239 276 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 IGHV1-24A0A0C4DH33 117 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 LY6HO94772 140 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 S100A7L2Q5SY68 101 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 LCNL1Q6ZST4 164 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 OR11H6Q8NGC7 330 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 IGHV3-73A0A0B4J1V6 119 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 LINC01619G3V211 115 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 LGALS1P09382 135 aaKnown RBP9.98□□□□□ -0.81
COL4A6-209ENST00000545689 PRB4P10163 310 aaPredicted RBP9.98□□□□□ -0.81
COL4A6-209ENST00000545689 RIPPLY3P57055 190 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 PRR31Q5SQ13 230 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 BOD1L2Q8IYS8 172 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 FAM186AA6NE01 2351 aa9.98□□□□□ -0.81
COL4A6-209ENST00000545689 KLF5Q13887 457 aaPredicted RBP9.98□□□□□ -0.81
COL4A6-209ENST00000545689 I3L3M4 83 aa9.97□□□□□ -0.81
COL4A6-209ENST00000545689 LRRK1Q38SD2 2015 aa9.97□□□□□ -0.81
COL4A6-209ENST00000545689 A0A087WX48 190 aa9.97□□□□□ -0.81
COL4A6-209ENST00000545689 RBAKDNA6NC62 111 aa9.97□□□□□ -0.81
COL4A6-209ENST00000545689 PMVKQ15126 192 aa9.97□□□□□ -0.81
COL4A6-209ENST00000545689 PRR30Q53SZ7 412 aaPredicted RBP9.97□□□□□ -0.81
COL4A6-209ENST00000545689 C2orf66Q6UXQ4 117 aa9.97□□□□□ -0.81
COL4A6-209ENST00000545689 RNF114Q9Y508 228 aa9.97□□□□□ -0.81
COL4A6-209ENST00000545689 A0A087WWL8 130 aa9.97□□□□□ -0.81
COL4A6-209ENST00000545689 PHLDA1Q8WV24 401 aaPredicted RBP9.97□□□□□ -0.81
COL4A6-209ENST00000545689 LHBP01229 141 aa9.97□□□□□ -0.81
COL4A6-209ENST00000545689 RUSC1-AS1Q66K80 236 aa9.97□□□□□ -0.81
COL4A6-209ENST00000545689 MPDZO75970 2070 aa9.97□□□□□ -0.81
COL4A6-209ENST00000545689 COX8AP10176 69 aa9.97□□□□□ -0.81
COL4A6-209ENST00000545689 SYNJ2BPP57105 145 aa9.97□□□□□ -0.81
COL4A6-209ENST00000545689 TAL2Q16559 108 aa9.97□□□□□ -0.81
COL4A6-209ENST00000545689 ZFAND6Q6FIF0 208 aa9.97□□□□□ -0.81
COL4A6-209ENST00000545689 TP53TG1Q9Y2A0 90 aa9.96□□□□□ -0.81
COL4A6-209ENST00000545689 VGLL1Q99990 258 aa9.96□□□□□ -0.81
COL4A6-209ENST00000545689 IGHV1OR15-1A0A075B7D0 117 aa9.96□□□□□ -0.82
COL4A6-209ENST00000545689 C2orf82Q6UX34 121 aa9.96□□□□□ -0.82
COL4A6-209ENST00000545689 TPSG1Q9NRR2 321 aa9.96□□□□□ -0.82
COL4A6-209ENST00000545689 SIVA1O15304 175 aa9.96□□□□□ -0.82
COL4A6-209ENST00000545689 GAGE2BQ13066 116 aa9.96□□□□□ -0.82
COL4A6-209ENST00000545689 GAGE2EQ4V326 116 aa9.96□□□□□ -0.82
COL4A6-209ENST00000545689 C20orf78Q9BR46 151 aa9.96□□□□□ -0.82
COL4A6-209ENST00000545689 GAGE2DQ9UEU5 116 aa9.96□□□□□ -0.82
COL4A6-209ENST00000545689 TRIOBPQ9H2D6 2365 aa9.96□□□□□ -0.82
COL4A6-209ENST00000545689 ZC2HC1AQ96GY0 325 aa9.96□□□□□ -0.82
COL4A6-209ENST00000545689 K7EMI3 77 aa9.95□□□□□ -0.82
COL4A6-209ENST00000545689 SSBP2P81877 361 aaPredicted RBP9.95□□□□□ -0.82
COL4A6-209ENST00000545689 GAGE12BA1L429 117 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms