RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 OR51E2Q9H255 320 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 RIBC2Q9H4K1 309 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 REEP1Q9H902 201 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 C8orf17Q9NRJ1 99 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 TAS2R4Q9NYW5 299 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 TRAV8-7A0A075B6U6 113 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 TRBV6-7A0A0A0MS04 114 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 TRAV14DV4A0A0A6YYC5 116 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 OR2T8A6NH00 312 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 TMEM212A6NML5 194 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 LYRM9A8MSI8 78 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 I3L2K1 104 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 NUPL2O15504 423 aaKnown RBP1.55□□□□□ -2.16
SNHG1-224ENST00000545688 CREBL2O60519 120 aaPredicted RBP1.55□□□□□ -2.16
SNHG1-224ENST00000545688 CRYZL1O95825 349 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 DHFRP00374 187 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 OCM2P0CE71 109 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 OCMP0CE72 109 aaPredicted RBP1.55□□□□□ -2.16
SNHG1-224ENST00000545688 HLA-DRB4P13762 266 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 CRHBPP24387 322 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 HTR2CP28335 458 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 TSPOP30536 169 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 DAPP51397 102 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 RPL30P62888 115 aaKnown RBP1.55□□□□□ -2.16
SNHG1-224ENST00000545688 PAFAH1B2P68402 229 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 HLA-DRB3P79483 266 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 WT1-ASQ06250 92 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 TPBGQ13641 420 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 SSX1Q16384 188 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 RTL8BQ17RB0 113 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 ACTL10Q5JWF8 245 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 OGFRL1Q5TC84 451 aaPredicted RBP1.55□□□□□ -2.16
SNHG1-224ENST00000545688 XAF1Q6GPH4 301 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 ZNF773Q6PK81 442 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 GLIPR1L1Q6UWM5 242 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 TOMM20LQ6UXN7 152 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 Q6ZRU5 148 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 SCXQ7RTU7 201 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 C6orf201Q7Z4U5 140 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 VKORC1L1Q8N0U8 176 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 OR5AK2Q8NH90 309 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 RXFP4Q8TDU9 374 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 DNAJC9Q8WXX5 260 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 NRBF2Q96F24 287 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 ADTRPQ96IZ2 230 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 GPER1Q99527 375 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 C20orf24Q9BUV8 137 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 NXF2Q9GZY0 626 aaKnown RBP1.55□□□□□ -2.16
SNHG1-224ENST00000545688 BANF2Q9H503 90 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 BET1LQ9NYM9 111 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 C21orf62Q9NYP8 219 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 ABRACLQ9P1F3 81 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 GNG8Q9UK08 70 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 HLA-DRB4X5D2U9 266 aa1.55□□□□□ -2.16
SNHG1-224ENST00000545688 IGKV3-7A0A075B6H7 116 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 IGHV3-49A0A0A0MS15 119 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 TRAV3A0A0B4J244 114 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 TMEM14DPA8MWL7 114 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 K7EP13 123 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 GOSR2O14653 212 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 CST1P01037 141 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 SERPINE2P07093 398 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 CD3GP09693 182 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 HTN3P15516 51 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 HLA-GP17693 338 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 SRMP19623 302 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 CRYBB3P26998 211 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 POLR2IP36954 125 aaKnown RBP1.54□□□□□ -2.16
SNHG1-224ENST00000545688 SERPINB10P48595 397 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 PSMD7P51665 324 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 GTF2A1P52655 376 aaPredicted RBP1.54□□□□□ -2.16
SNHG1-224ENST00000545688 EMP1P54849 157 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 DAD1P61803 113 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 MXD1Q05195 221 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 RBM48Q5RL73 367 aaKnown RBP1.54□□□□□ -2.16
SNHG1-224ENST00000545688 GDF5OSQ5U4N7 250 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 KDM4DQ6B0I6 523 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 AMTNQ6UX39 209 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 Q6ZS49 121 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 ACBD7Q8N6N7 88 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 GDPD1Q8N9F7 314 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 OR10W1Q8NGF6 305 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 OR4A4PQ8NGN8 299 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 OR8J1Q8NGP2 316 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 ATP6V1G3Q96LB4 118 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 THTPAQ9BU02 230 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 FAM192AQ9GZU8 254 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 OR2D2Q9H210 308 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 NDUFA4L2Q9NRX3 87 aa1.54□□□□□ -2.16
SNHG1-224ENST00000545688 V9GYY5 206 aaPredicted RBP1.54□□□□□ -2.16
SNHG1-224ENST00000545688 A0A096LPF7 62 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 J3QLW9 94 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 ZNF701M0R085 212 aaPredicted RBP1.53□□□□□ -2.16
SNHG1-224ENST00000545688 UPK2O00526 184 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 SIVA1O15304 175 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 FABP7O15540 132 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 CRXO43186 299 aaPredicted RBP1.53□□□□□ -2.16
SNHG1-224ENST00000545688 DCTN3O75935 186 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 IGLV2-8P01709 118 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 HBE1P02100 147 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms