RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 FER1L6-AS1Q8NA97 138 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 PRR25Q96S07 402 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 CNFNQ9BYD5 112 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 BOD1L1Q8NFC6 3051 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 SNAI2O43623 268 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 SCGB2A1O75556 95 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 KIR3DS1Q14943 382 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 GFRALQ6UXV0 394 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 OR5A1Q8NGJ0 315 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 ASCL2Q99929 193 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 THYN1Q9P016 225 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 A0A0G2JLM5 398 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 NPYP01303 97 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 UQCRFS1P47985 274 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 DLX1P56177 255 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 CFHR4Q92496 578 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 JMJD8Q96S16 334 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 CSTL1Q9H114 145 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 MAP1LC3AQ9H492 121 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 HIGD1BQ9P298 99 aa6.85□□□□□ -1.31
TDP1-204ENST00000545686 KLK10O43240 276 aa6.84□□□□□ -1.31
TDP1-204ENST00000545686 NDUFS7O75251 213 aa6.84□□□□□ -1.31
TDP1-204ENST00000545686 EGR2P11161 476 aaPredicted RBP6.84□□□□□ -1.31
TDP1-204ENST00000545686 LY6G5BQ8NDX9 201 aa6.84□□□□□ -1.31
TDP1-204ENST00000545686 OR11H6Q8NGC7 330 aa6.84□□□□□ -1.31
TDP1-204ENST00000545686 FANCD2OSQ96PS1 177 aa6.84□□□□□ -1.31
TDP1-204ENST00000545686 DPM3Q9P2X0 92 aa6.84□□□□□ -1.31
TDP1-204ENST00000545686 POLEQ07864 2286 aa6.84□□□□□ -1.31
TDP1-204ENST00000545686 PCNX1Q96RV3 2341 aa6.84□□□□□ -1.31
TDP1-204ENST00000545686 ZZEF1O43149 2961 aa6.84□□□□□ -1.31
TDP1-204ENST00000545686 TMSB15BA0A087X1C1 80 aa6.84□□□□□ -1.32
TDP1-204ENST00000545686 HLA-DRB4P13762 266 aa6.84□□□□□ -1.32
TDP1-204ENST00000545686 TWIST1Q15672 202 aa6.84□□□□□ -1.32
TDP1-204ENST00000545686 OR2K2Q8NGT1 345 aa6.84□□□□□ -1.32
TDP1-204ENST00000545686 ABHD17AQ96GS6 310 aa6.84□□□□□ -1.32
TDP1-204ENST00000545686 ZMAT4Q9H898 229 aa6.84□□□□□ -1.32
TDP1-204ENST00000545686 NXT2Q9NPJ8 142 aaKnown RBP6.84□□□□□ -1.32
TDP1-204ENST00000545686 HLA-DRB4X5D2U9 266 aa6.84□□□□□ -1.32
TDP1-204ENST00000545686 CEP250Q9BV73 2442 aa6.83□□□□□ -1.32
TDP1-204ENST00000545686 IGKV2-40A0A087WW87 121 aaPredicted RBP6.83□□□□□ -1.32
TDP1-204ENST00000545686 A0A1W2PPM0 123 aa6.83□□□□□ -1.32
TDP1-204ENST00000545686 F8W735 103 aaPredicted RBP6.83□□□□□ -1.32
TDP1-204ENST00000545686 H3BUT2 72 aa6.83□□□□□ -1.32
TDP1-204ENST00000545686 IGKV2D-40P01614 121 aaPredicted RBP6.83□□□□□ -1.32
TDP1-204ENST00000545686 CD3EP07766 207 aa6.83□□□□□ -1.32
TDP1-204ENST00000545686 C5orf64Q2M2E5 130 aa6.83□□□□□ -1.32
TDP1-204ENST00000545686 TTC9CQ8N5M4 171 aa6.83□□□□□ -1.32
TDP1-204ENST00000545686 SMG1Q96Q15 3661 aaKnown RBP6.83□□□□□ -1.32
TDP1-204ENST00000545686 MEGF9Q9H1U4 602 aa6.83□□□□□ -1.32
TDP1-204ENST00000545686 C21orf62Q9NYP8 219 aa6.83□□□□□ -1.32
TDP1-204ENST00000545686 FCER1GP30273 86 aa6.83□□□□□ -1.32
TDP1-204ENST00000545686 PRB3Q04118 309 aaPredicted RBP6.83□□□□□ -1.32
TDP1-204ENST00000545686 NEGR1Q7Z3B1 354 aa6.83□□□□□ -1.32
TDP1-204ENST00000545686 ONECUT1Q9UBC0 465 aa6.83□□□□□ -1.32
TDP1-204ENST00000545686 SMPXQ9UHP9 88 aa6.83□□□□□ -1.32
TDP1-204ENST00000545686 CACNA1HO95180 2353 aa6.82□□□□□ -1.32
TDP1-204ENST00000545686 ZNF318Q5VUA4 2279 aa6.82□□□□□ -1.32
TDP1-204ENST00000545686 G3V4G9 280 aa6.82□□□□□ -1.32
TDP1-204ENST00000545686 NMUP48645 174 aa6.82□□□□□ -1.32
TDP1-204ENST00000545686 ZNF562Q6V9R5 426 aa6.82□□□□□ -1.32
TDP1-204ENST00000545686 ARPC1AQ92747 370 aa6.82□□□□□ -1.32
TDP1-204ENST00000545686 RNF185Q96GF1 192 aa6.82□□□□□ -1.32
TDP1-204ENST00000545686 PSMG3-AS1Q96PY0 264 aa6.82□□□□□ -1.32
TDP1-204ENST00000545686 CNOT1A5YKK6 2376 aaKnown RBP6.82□□□□□ -1.32
TDP1-204ENST00000545686 ODF3BA8MYP8 253 aa6.82□□□□□ -1.32
TDP1-204ENST00000545686 M0R1W7 72 aa6.82□□□□□ -1.32
TDP1-204ENST00000545686 SMIM17P0DL12 118 aa6.82□□□□□ -1.32
TDP1-204ENST00000545686 ODF1Q14990 250 aa6.82□□□□□ -1.32
TDP1-204ENST00000545686 PCP2Q8IVA1 136 aa6.82□□□□□ -1.32
TDP1-204ENST00000545686 BCL6BQ8N143 479 aaPredicted RBP6.82□□□□□ -1.32
TDP1-204ENST00000545686 DKK2Q9UBU2 259 aa6.82□□□□□ -1.32
TDP1-204ENST00000545686 HILPDAQ9Y5L2 63 aa6.82□□□□□ -1.32
TDP1-204ENST00000545686 RBAKDNA6NC62 111 aa6.81□□□□□ -1.32
TDP1-204ENST00000545686 FABP5P3A8MUU1 101 aa6.81□□□□□ -1.32
TDP1-204ENST00000545686 SMKR1H3BMG3 65 aa6.81□□□□□ -1.32
TDP1-204ENST00000545686 ATP5LO75964 103 aa6.81□□□□□ -1.32
TDP1-204ENST00000545686 FABP2P12104 132 aa6.81□□□□□ -1.32
TDP1-204ENST00000545686 EVI2AP22794 236 aa6.81□□□□□ -1.32
TDP1-204ENST00000545686 RAB9AP51151 201 aa6.81□□□□□ -1.32
TDP1-204ENST00000545686 ZNF80P51504 273 aaPredicted RBP6.81□□□□□ -1.32
TDP1-204ENST00000545686 KLF17Q5JT82 389 aaPredicted RBP6.81□□□□□ -1.32
TDP1-204ENST00000545686 SPCS1Q9Y6A9 102 aa6.81□□□□□ -1.32
TDP1-204ENST00000545686 ASPMQ8IZT6 3477 aa6.81□□□□□ -1.32
TDP1-204ENST00000545686 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.81□□□□□ -1.32
TDP1-204ENST00000545686 SAP30O75446 220 aa6.81□□□□□ -1.32
TDP1-204ENST00000545686 IGHG4P01861 327 aa6.81□□□□□ -1.32
TDP1-204ENST00000545686 SMIM13P0DJ93 91 aa6.81□□□□□ -1.32
TDP1-204ENST00000545686 ZNF575Q86XF7 245 aa6.81□□□□□ -1.32
TDP1-204ENST00000545686 VGLL1Q99990 258 aa6.81□□□□□ -1.32
TDP1-204ENST00000545686 KALRNO60229 2985 aa6.8□□□□□ -1.32
TDP1-204ENST00000545686 OOSP1A8MZH6 123 aa6.8□□□□□ -1.32
TDP1-204ENST00000545686 TNFRSF6BO95407 300 aa6.8□□□□□ -1.32
TDP1-204ENST00000545686 LEPP41159 167 aa6.8□□□□□ -1.32
TDP1-204ENST00000545686 FXYD7P58549 80 aa6.8□□□□□ -1.32
TDP1-204ENST00000545686 CCDC144NLQ6NUI1 221 aa6.8□□□□□ -1.32
TDP1-204ENST00000545686 PRSS57Q6UWY2 283 aa6.8□□□□□ -1.32
TDP1-204ENST00000545686 Q8TAT8 98 aa6.8□□□□□ -1.32
TDP1-204ENST00000545686 HHLA3Q9XRX5 114 aa6.8□□□□□ -1.32
TDP1-204ENST00000545686 SMAD5-AS1Q9Y6J3 95 aa6.8□□□□□ -1.32
TDP1-204ENST00000545686 S4R3C0 116 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms