RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 LINC00299Q6ZSB3 139 aa14.88□□□□□ -0.03
SCARB1-210ENST00000545493 STX12Q86Y82 276 aa14.88□□□□□ -0.03
SCARB1-210ENST00000545493 C16orf74Q96GX8 76 aa14.88□□□□□ -0.03
SCARB1-210ENST00000545493 RPL29P47914 159 aaKnown RBP14.87□□□□□ -0.03
SCARB1-210ENST00000545493 GFI1BQ5VTD9 330 aa14.87□□□□□ -0.03
SCARB1-210ENST00000545493 Q6ZRG5 221 aa14.87□□□□□ -0.03
SCARB1-210ENST00000545493 OR1L4Q8NGR5 311 aa14.87□□□□□ -0.03
SCARB1-210ENST00000545493 RNASE8Q8TDE3 154 aaKnown RBP14.87□□□□□ -0.03
SCARB1-210ENST00000545493 DNAJC4Q9NNZ3 241 aa14.87□□□□□ -0.03
SCARB1-210ENST00000545493 SLC39A9Q9NUM3 307 aa14.87□□□□□ -0.03
SCARB1-210ENST00000545493 PXMP4Q9Y6I8 212 aa14.87□□□□□ -0.03
SCARB1-210ENST00000545493 S100A11P31949 105 aa14.86□□□□□ -0.03
SCARB1-210ENST00000545493 MZT2BQ6NZ67 158 aa14.86□□□□□ -0.03
SCARB1-210ENST00000545493 Q6ZR54 194 aa14.86□□□□□ -0.03
SCARB1-210ENST00000545493 PFDN5Q99471 154 aa14.86□□□□□ -0.03
SCARB1-210ENST00000545493 ZNF586Q9NXT0 402 aa14.86□□□□□ -0.03
SCARB1-210ENST00000545493 PCLOQ9Y6V0 5065 aa14.86□□□□□ -0.03
SCARB1-210ENST00000545493 HTN1P15515 57 aa14.85□□□□□ -0.03
SCARB1-210ENST00000545493 FGF7P21781 194 aa14.85□□□□□ -0.03
SCARB1-210ENST00000545493 RNF212Q495C1 297 aa14.85□□□□□ -0.03
SCARB1-210ENST00000545493 C15orf53Q8NAA6 179 aa14.85□□□□□ -0.03
SCARB1-210ENST00000545493 TMEM263Q8WUH6 116 aaKnown RBP14.85□□□□□ -0.03
SCARB1-210ENST00000545493 S100ZQ8WXG8 99 aa14.85□□□□□ -0.03
SCARB1-210ENST00000545493 DNAH5Q8TE73 4624 aa14.85□□□□□ -0.03
SCARB1-210ENST00000545493 H7BYZ3 331 aa14.84□□□□□ -0.03
SCARB1-210ENST00000545493 HBG1P69891 147 aa14.84□□□□□ -0.03
SCARB1-210ENST00000545493 HBG2P69892 147 aa14.84□□□□□ -0.03
SCARB1-210ENST00000545493 OR10J6PQ8NGY7 276 aa14.84□□□□□ -0.03
SCARB1-210ENST00000545493 CHAC2Q8WUX2 184 aa14.84□□□□□ -0.03
SCARB1-210ENST00000545493 C20orf144Q9BQM9 153 aa14.84□□□□□ -0.03
SCARB1-210ENST00000545493 GPN1Q9HCN4 374 aaPredicted RBP14.84□□□□□ -0.03
SCARB1-210ENST00000545493 PRSS29PA6NIE9 313 aa14.83□□□□□ -0.04
SCARB1-210ENST00000545493 NPIPB6E9PJ23 425 aa14.83□□□□□ -0.04
SCARB1-210ENST00000545493 ZNF253O75346 499 aa14.83□□□□□ -0.04
SCARB1-210ENST00000545493 GUK1Q16774 197 aa14.83□□□□□ -0.04
SCARB1-210ENST00000545493 GCSAMLQ5JQS6 135 aa14.83□□□□□ -0.04
SCARB1-210ENST00000545493 ENKURQ8TC29 256 aa14.83□□□□□ -0.04
SCARB1-210ENST00000545493 NPCDR1Q9BY65 106 aa14.83□□□□□ -0.04
SCARB1-210ENST00000545493 F5H768 121 aa14.82□□□□□ -0.04
SCARB1-210ENST00000545493 UPK1BO75841 260 aa14.82□□□□□ -0.04
SCARB1-210ENST00000545493 SIX6O95475 246 aa14.82□□□□□ -0.04
SCARB1-210ENST00000545493 ATP5G1P05496 136 aa14.82□□□□□ -0.04
SCARB1-210ENST00000545493 CT45A10P0DMU9 189 aa14.82□□□□□ -0.04
SCARB1-210ENST00000545493 ATP5G3P48201 142 aa14.82□□□□□ -0.04
SCARB1-210ENST00000545493 ODF3Q96PU9 254 aa14.82□□□□□ -0.04
SCARB1-210ENST00000545493 NOP10Q9NPE3 64 aaKnown RBP14.82□□□□□ -0.04
SCARB1-210ENST00000545493 TIMM8BQ9Y5J9 83 aaPredicted RBP14.82□□□□□ -0.04
SCARB1-210ENST00000545493 TRBV19A0A075B6N1 114 aa14.81□□□□□ -0.04
SCARB1-210ENST00000545493 J3KRW8 73 aa14.81□□□□□ -0.04
SCARB1-210ENST00000545493 M0R3E3 92 aa14.81□□□□□ -0.04
SCARB1-210ENST00000545493 PYYP10082 97 aa14.81□□□□□ -0.04
SCARB1-210ENST00000545493 IFITM3Q01628 133 aa14.81□□□□□ -0.04
SCARB1-210ENST00000545493 ATP6V1FQ16864 119 aa14.81□□□□□ -0.04
SCARB1-210ENST00000545493 ZNF493Q6ZR52 646 aa14.81□□□□□ -0.04
SCARB1-210ENST00000545493 OR5AC2Q9NZP5 309 aa14.81□□□□□ -0.04
SCARB1-210ENST00000545493 TMEM14CQ9P0S9 112 aa14.81□□□□□ -0.04
SCARB1-210ENST00000545493 NDUFB4O95168 129 aa14.8□□□□□ -0.04
SCARB1-210ENST00000545493 LINC00612Q8N6U2 182 aa14.8□□□□□ -0.04
SCARB1-210ENST00000545493 THAP6Q8TBB0 222 aa14.8□□□□□ -0.04
SCARB1-210ENST00000545493 MRPL53Q96EL3 112 aaKnown RBP14.8□□□□□ -0.04
SCARB1-210ENST00000545493 CBY3A6NI87 242 aa14.79□□□□□ -0.04
SCARB1-210ENST00000545493 H0YIZ8 118 aa14.79□□□□□ -0.04
SCARB1-210ENST00000545493 MPDU1O75352 247 aa14.79□□□□□ -0.04
SCARB1-210ENST00000545493 LEPP41159 167 aa14.79□□□□□ -0.04
SCARB1-210ENST00000545493 NHLH2Q02577 135 aa14.79□□□□□ -0.04
SCARB1-210ENST00000545493 OR5C1Q8NGR4 320 aa14.79□□□□□ -0.04
SCARB1-210ENST00000545493 RNF141Q8WVD5 230 aa14.79□□□□□ -0.04
SCARB1-210ENST00000545493 SLC25A2Q9BXI2 301 aa14.79□□□□□ -0.04
SCARB1-210ENST00000545493 NMES1Q9C002 83 aa14.79□□□□□ -0.04
SCARB1-210ENST00000545493 HSPG2P98160 4391 aa14.78□□□□□ -0.04
SCARB1-210ENST00000545493 LRRC37A5PQ49AS3 106 aa14.78□□□□□ -0.04
SCARB1-210ENST00000545493 KRTAP17-1Q9BYP8 105 aa14.78□□□□□ -0.04
SCARB1-210ENST00000545493 ABCA13Q86UQ4 5058 aa14.78□□□□□ -0.04
SCARB1-210ENST00000545493 APOBP04114 4563 aaKnown RBP14.77□□□□□ -0.04
SCARB1-210ENST00000545493 TRAV12-3A0A0B4J271 114 aa14.77□□□□□ -0.05
SCARB1-210ENST00000545493 E5RGE8 158 aa14.77□□□□□ -0.05
SCARB1-210ENST00000545493 NUDT3O95989 172 aa14.77□□□□□ -0.05
SCARB1-210ENST00000545493 HIST1H1EP10412 219 aaKnown RBP14.77□□□□□ -0.05
SCARB1-210ENST00000545493 FAM3BP58499 235 aaPredicted RBP14.77□□□□□ -0.05
SCARB1-210ENST00000545493 PDE6HQ13956 83 aa14.77□□□□□ -0.05
SCARB1-210ENST00000545493 A6NHS1 94 aa14.76□□□□□ -0.05
SCARB1-210ENST00000545493 ERCC8Q13216 396 aa14.76□□□□□ -0.05
SCARB1-210ENST00000545493 CLINT1Q14677 625 aa14.76□□□□□ -0.05
SCARB1-210ENST00000545493 MIR17HGQ75NE6 70 aa14.76□□□□□ -0.05
SCARB1-210ENST00000545493 EXOC3-AS1Q8N2X6 119 aa14.76□□□□□ -0.05
SCARB1-210ENST00000545493 FAM167A-AS1Q96KT0 104 aa14.76□□□□□ -0.05
SCARB1-210ENST00000545493 FAM19A4Q96LR4 140 aa14.76□□□□□ -0.05
SCARB1-210ENST00000545493 ATG101Q9BSB4 218 aa14.76□□□□□ -0.05
SCARB1-210ENST00000545493 PRAF2O60831 178 aa14.75□□□□□ -0.05
SCARB1-210ENST00000545493 ZNRF2Q8NHG8 242 aa14.75□□□□□ -0.05
SCARB1-210ENST00000545493 BLNKQ8WV28 456 aa14.75□□□□□ -0.05
SCARB1-210ENST00000545493 PTTG2Q9NZH5 202 aa14.75□□□□□ -0.05
SCARB1-210ENST00000545493 KLLNB2CW77 178 aa14.74□□□□□ -0.05
SCARB1-210ENST00000545493 INMT-MINDY4F8WBC2 141 aa14.74□□□□□ -0.05
SCARB1-210ENST00000545493 H2BFSP57053 126 aa14.74□□□□□ -0.05
SCARB1-210ENST00000545493 BTN1A1Q13410 526 aa14.74□□□□□ -0.05
SCARB1-210ENST00000545493 CCDC28AQ8IWP9 274 aa14.74□□□□□ -0.05
SCARB1-210ENST00000545493 PYGO2Q9BRQ0 406 aa14.74□□□□□ -0.05
SCARB1-210ENST00000545493 WDR61Q9GZS3 305 aaKnown RBP14.74□□□□□ -0.05
SCARB1-210ENST00000545493 SLC25A31Q9H0C2 315 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms