RNA–Protein interactions for RNA: ENST00000545153.5

PTPN6-223, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 3

Gene PTPN6, Length 959 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-223	ENST00000545153	OR10J6P	Q8NGY7	276 aa		10.36	□□□□□ -0.75
PTPN6-223	ENST00000545153	FXYD5	Q96DB9	178 aa		10.36	□□□□□ -0.75
PTPN6-223	ENST00000545153	GOLT1B	Q9Y3E0	138 aa		10.36	□□□□□ -0.75
PTPN6-223	ENST00000545153	CRX	O43186	299 aa	Predicted RBP	10.35	□□□□□ -0.75
PTPN6-223	ENST00000545153	OR7C2	O60412	319 aa		10.35	□□□□□ -0.75
PTPN6-223	ENST00000545153	AMBP	P02760	352 aa		10.35	□□□□□ -0.75
PTPN6-223	ENST00000545153	EXOC3-AS1	Q8N2X6	119 aa		10.35	□□□□□ -0.75
PTPN6-223	ENST00000545153	ZNF503	Q96F45	646 aa		10.35	□□□□□ -0.75
PTPN6-223	ENST00000545153	IGF2BP2-AS1	Q96M15	143 aa		10.35	□□□□□ -0.75
PTPN6-223	ENST00000545153	SACS	Q9NZJ4	4579 aa		10.35	□□□□□ -0.75
PTPN6-223	ENST00000545153	TRAV12-2	A0A075B6T6	113 aa		10.34	□□□□□ -0.75
PTPN6-223	ENST00000545153		A0A1W2PPV4	95 aa		10.34	□□□□□ -0.75
PTPN6-223	ENST00000545153	BOLA2-SMG1P6	H3BVE0	249 aa		10.34	□□□□□ -0.75
PTPN6-223	ENST00000545153		M0R3E3	92 aa		10.34	□□□□□ -0.75
PTPN6-223	ENST00000545153	M6PR	P20645	277 aa		10.34	□□□□□ -0.75
PTPN6-223	ENST00000545153	ATP6V0C	P27449	155 aa		10.34	□□□□□ -0.75
PTPN6-223	ENST00000545153	RAB2A	P61019	212 aa		10.34	□□□□□ -0.75
PTPN6-223	ENST00000545153	PDE6H	Q13956	83 aa		10.34	□□□□□ -0.75
PTPN6-223	ENST00000545153	RPL7L1	Q6DKI1	246 aa	Known RBP	10.34	□□□□□ -0.75
PTPN6-223	ENST00000545153	FAM122C	Q6P4D5	195 aa		10.34	□□□□□ -0.75
PTPN6-223	ENST00000545153	OR10G4	Q8NGN3	311 aa		10.34	□□□□□ -0.75
PTPN6-223	ENST00000545153	OR10G9	Q8NGN4	311 aa		10.34	□□□□□ -0.75
PTPN6-223	ENST00000545153	OR10G7	Q8NGN6	311 aa		10.34	□□□□□ -0.75
PTPN6-223	ENST00000545153	NEU1	Q99519	415 aa		10.34	□□□□□ -0.75
PTPN6-223	ENST00000545153	TMEM208	Q9BTX3	173 aa		10.34	□□□□□ -0.75
PTPN6-223	ENST00000545153	SMIM9	A6NGZ8	99 aa		10.33	□□□□□ -0.76
PTPN6-223	ENST00000545153	ARPC5	O15511	151 aa		10.33	□□□□□ -0.76
PTPN6-223	ENST00000545153	TAS2R45	P59539	299 aa		10.33	□□□□□ -0.76
PTPN6-223	ENST00000545153	ICAM4	Q14773	271 aa		10.33	□□□□□ -0.76
PTPN6-223	ENST00000545153	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.33	□□□□□ -0.76
PTPN6-223	ENST00000545153	BAP18	Q8IXM2	172 aa		10.33	□□□□□ -0.76
PTPN6-223	ENST00000545153	AAMDC	Q9H7C9	122 aa		10.33	□□□□□ -0.76
PTPN6-223	ENST00000545153	PRELID1	Q9Y255	219 aa		10.33	□□□□□ -0.76
PTPN6-223	ENST00000545153	TENM2	Q9NT68	2774 aa		10.33	□□□□□ -0.76
PTPN6-223	ENST00000545153	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.32	□□□□□ -0.76
PTPN6-223	ENST00000545153	HMGB3	O15347	200 aa	Known RBP	10.32	□□□□□ -0.76
PTPN6-223	ENST00000545153	INS	P01308	110 aa		10.32	□□□□□ -0.76
PTPN6-223	ENST00000545153	PRM2	P04554	102 aa		10.32	□□□□□ -0.76
PTPN6-223	ENST00000545153	CT45A10	P0DMU9	189 aa		10.32	□□□□□ -0.76
PTPN6-223	ENST00000545153	EMP1	P54849	157 aa		10.32	□□□□□ -0.76
PTPN6-223	ENST00000545153	RAN	P62826	216 aa	Known RBP	10.32	□□□□□ -0.76
PTPN6-223	ENST00000545153	ERCC8	Q13216	396 aa		10.32	□□□□□ -0.76
PTPN6-223	ENST00000545153	KHDC3L	Q587J8	217 aa		10.32	□□□□□ -0.76
PTPN6-223	ENST00000545153	RPP25L	Q8N5L8	163 aa	Known RBP	10.32	□□□□□ -0.76
PTPN6-223	ENST00000545153	OR2G3	Q8NGZ4	309 aa		10.32	□□□□□ -0.76
PTPN6-223	ENST00000545153	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.32	□□□□□ -0.76
PTPN6-223	ENST00000545153	MRPL53	Q96EL3	112 aa	Known RBP	10.32	□□□□□ -0.76
PTPN6-223	ENST00000545153	PSMG3	Q9BT73	122 aa	Predicted RBP	10.32	□□□□□ -0.76
PTPN6-223	ENST00000545153	SH3BGRL3	Q9H299	93 aa		10.32	□□□□□ -0.76
PTPN6-223	ENST00000545153	NPIPB6	E9PJ23	425 aa		10.31	□□□□□ -0.76
PTPN6-223	ENST00000545153	HBE1	P02100	147 aa		10.31	□□□□□ -0.76
PTPN6-223	ENST00000545153	CDKN1B	P46527	198 aa		10.31	□□□□□ -0.76
PTPN6-223	ENST00000545153	UBE2L3	P68036	154 aa	Known RBP	10.31	□□□□□ -0.76
PTPN6-223	ENST00000545153	KIR3DS1	Q14943	382 aa		10.31	□□□□□ -0.76
PTPN6-223	ENST00000545153	PHYHIPL	Q96FC7	376 aa		10.31	□□□□□ -0.76
PTPN6-223	ENST00000545153	LINC01587	Q99440	93 aa		10.31	□□□□□ -0.76
PTPN6-223	ENST00000545153	NUPR2	A6NF83	97 aa		10.3	□□□□□ -0.76
PTPN6-223	ENST00000545153	ZNF705G	A8MUZ8	300 aa	Predicted RBP	10.3	□□□□□ -0.76
PTPN6-223	ENST00000545153	TAAR5	O14804	337 aa		10.3	□□□□□ -0.76
PTPN6-223	ENST00000545153	MB	P02144	154 aa		10.3	□□□□□ -0.76
PTPN6-223	ENST00000545153	SERF2	P84101	59 aa		10.3	□□□□□ -0.76
PTPN6-223	ENST00000545153	RRN3P1	Q2M238	152 aa		10.3	□□□□□ -0.76
PTPN6-223	ENST00000545153	ZNF767P	Q75MW2	155 aa		10.3	□□□□□ -0.76
PTPN6-223	ENST00000545153	OR11H4	Q8NGC9	324 aa		10.3	□□□□□ -0.76
PTPN6-223	ENST00000545153	GNPNAT1	Q96EK6	184 aa	Predicted RBP	10.3	□□□□□ -0.76
PTPN6-223	ENST00000545153	AGPAT4-IT1	Q9H0P7	198 aa		10.3	□□□□□ -0.76
PTPN6-223	ENST00000545153	CYTL1	Q9NRR1	136 aa		10.3	□□□□□ -0.76
PTPN6-223	ENST00000545153	CELA1	Q9UNI1	258 aa		10.3	□□□□□ -0.76
PTPN6-223	ENST00000545153	LOC102723971	A0A1B0GUV8	181 aa		10.29	□□□□□ -0.76
PTPN6-223	ENST00000545153	TMEM189	A5PLL7	270 aa		10.29	□□□□□ -0.76
PTPN6-223	ENST00000545153		J3KRW8	73 aa		10.29	□□□□□ -0.76
PTPN6-223	ENST00000545153	TSPO	P30536	169 aa		10.29	□□□□□ -0.76
PTPN6-223	ENST00000545153	LYPD1	Q8N2G4	141 aa		10.29	□□□□□ -0.76
PTPN6-223	ENST00000545153	LINC00477	Q96M19	166 aa		10.29	□□□□□ -0.76
PTPN6-223	ENST00000545153		Q9H3A6	140 aa		10.29	□□□□□ -0.76
PTPN6-223	ENST00000545153	KLK5	Q9Y337	293 aa	Predicted RBP	10.29	□□□□□ -0.76
PTPN6-223	ENST00000545153	RYR2	Q92736	4967 aa		10.28	□□□□□ -0.76
PTPN6-223	ENST00000545153	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	10.28	□□□□□ -0.76
PTPN6-223	ENST00000545153	JTB	O76095	146 aa		10.28	□□□□□ -0.76
PTPN6-223	ENST00000545153	IGKV2D-40	P01614	121 aa	Predicted RBP	10.28	□□□□□ -0.76
PTPN6-223	ENST00000545153	SPART-AS1	P0CW21	52 aa		10.28	□□□□□ -0.76
PTPN6-223	ENST00000545153	HTN1	P15515	57 aa		10.28	□□□□□ -0.76
PTPN6-223	ENST00000545153	AZU1	P20160	251 aa		10.28	□□□□□ -0.76
PTPN6-223	ENST00000545153	LEP	P41159	167 aa		10.28	□□□□□ -0.76
PTPN6-223	ENST00000545153	CDC34	P49427	236 aa	Predicted RBP	10.28	□□□□□ -0.76
PTPN6-223	ENST00000545153	C12orf74	Q32Q52	190 aa		10.28	□□□□□ -0.76
PTPN6-223	ENST00000545153		Q6ZNX1	250 aa		10.28	□□□□□ -0.76
PTPN6-223	ENST00000545153	PQLC2	Q6ZP29	291 aa		10.28	□□□□□ -0.76
PTPN6-223	ENST00000545153	RAB24	Q969Q5	203 aa		10.28	□□□□□ -0.76
PTPN6-223	ENST00000545153	VGLL1	Q99990	258 aa		10.28	□□□□□ -0.76
PTPN6-223	ENST00000545153	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.28	□□□□□ -0.76
PTPN6-223	ENST00000545153	PLA2G2E	Q9NZK7	142 aa		10.28	□□□□□ -0.76
PTPN6-223	ENST00000545153	LCE6A	A0A183	80 aa		10.27	□□□□□ -0.77
PTPN6-223	ENST00000545153	PGP	A6NDG6	321 aa		10.27	□□□□□ -0.77
PTPN6-223	ENST00000545153	HMSD	A8MTL9	139 aa		10.27	□□□□□ -0.77
PTPN6-223	ENST00000545153	STAG3L2	P0CL84	134 aa		10.27	□□□□□ -0.77
PTPN6-223	ENST00000545153	STAG3L3	P0CL85	134 aa		10.27	□□□□□ -0.77
PTPN6-223	ENST00000545153	CSN1S1	P47710	185 aa		10.27	□□□□□ -0.77
PTPN6-223	ENST00000545153	GFI1B	Q5VTD9	330 aa		10.27	□□□□□ -0.77
PTPN6-223	ENST00000545153	C9orf47	Q6ZRZ4	202 aa		10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms