RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 Q6ZTC4 211 aa11.3□□□□□ -0.6
CCDC78-216ENST00000544996 MIR17HGQ75NE6 70 aa11.3□□□□□ -0.6
CCDC78-216ENST00000544996 BAP18Q8IXM2 172 aa11.3□□□□□ -0.6
CCDC78-216ENST00000544996 MRPL53Q96EL3 112 aaKnown RBP11.3□□□□□ -0.6
CCDC78-216ENST00000544996 PARD6GQ9BYG4 376 aaPredicted RBP11.3□□□□□ -0.6
CCDC78-216ENST00000544996 OR51M1Q9H341 326 aa11.3□□□□□ -0.6
CCDC78-216ENST00000544996 AAMDCQ9H7C9 122 aa11.3□□□□□ -0.6
CCDC78-216ENST00000544996 FUT9Q9Y231 359 aa11.3□□□□□ -0.6
CCDC78-216ENST00000544996 PRELID1Q9Y255 219 aa11.3□□□□□ -0.6
CCDC78-216ENST00000544996 TRAV12-2A0A075B6T6 113 aa11.29□□□□□ -0.6
CCDC78-216ENST00000544996 PRAC2D3DTV9 90 aa11.29□□□□□ -0.6
CCDC78-216ENST00000544996 CDKN1BP46527 198 aa11.29□□□□□ -0.6
CCDC78-216ENST00000544996 TCTAP57738 103 aa11.29□□□□□ -0.6
CCDC78-216ENST00000544996 C12orf74Q32Q52 190 aa11.29□□□□□ -0.6
CCDC78-216ENST00000544996 TMEM256Q8N2U0 113 aa11.29□□□□□ -0.6
CCDC78-216ENST00000544996 LINC00476Q8WZB0 136 aa11.29□□□□□ -0.6
CCDC78-216ENST00000544996 FAM167A-AS1Q96KT0 104 aa11.29□□□□□ -0.6
CCDC78-216ENST00000544996 PAXXQ9BUH6 204 aa11.29□□□□□ -0.6
CCDC78-216ENST00000544996 CELA1Q9UNI1 258 aa11.29□□□□□ -0.6
CCDC78-216ENST00000544996 DYNC2H1Q8NCM8 4307 aaKnown RBP11.28□□□□□ -0.6
CCDC78-216ENST00000544996 NDUFB4O95168 129 aa11.28□□□□□ -0.6
CCDC78-216ENST00000544996 LY6G6CO95867 125 aa11.28□□□□□ -0.6
CCDC78-216ENST00000544996 NBEAP1P0C6P0 100 aa11.28□□□□□ -0.6
CCDC78-216ENST00000544996 ZNF266Q14584 549 aa11.28□□□□□ -0.6
CCDC78-216ENST00000544996 RPP25LQ8N5L8 163 aaKnown RBP11.28□□□□□ -0.6
CCDC78-216ENST00000544996 FAM210AQ96ND0 272 aa11.28□□□□□ -0.6
CCDC78-216ENST00000544996 AQP10Q96PS8 301 aa11.28□□□□□ -0.6
CCDC78-216ENST00000544996 LINC01587Q99440 93 aa11.28□□□□□ -0.6
CCDC78-216ENST00000544996 WFDC1Q9HC57 220 aa11.28□□□□□ -0.6
CCDC78-216ENST00000544996 IGLL5B9A064 214 aa11.27□□□□□ -0.61
CCDC78-216ENST00000544996 OR7C2O60412 319 aa11.27□□□□□ -0.61
CCDC78-216ENST00000544996 TAS2R45P59539 299 aa11.27□□□□□ -0.61
CCDC78-216ENST00000544996 OXA1LQ15070 435 aa11.27□□□□□ -0.61
CCDC78-216ENST00000544996 ZNF767PQ75MW2 155 aa11.27□□□□□ -0.61
CCDC78-216ENST00000544996 INO80EQ8NBZ0 244 aaPredicted RBP11.27□□□□□ -0.61
CCDC78-216ENST00000544996 RNF141Q8WVD5 230 aa11.27□□□□□ -0.61
CCDC78-216ENST00000544996 DKK2Q9UBU2 259 aa11.27□□□□□ -0.61
CCDC78-216ENST00000544996 YTHDF2Q9Y5A9 579 aaKnown RBP11.27□□□□□ -0.61
CCDC78-216ENST00000544996 DEFB131BA0A096LNP1 70 aa11.26□□□□□ -0.61
CCDC78-216ENST00000544996 ZNF705GA8MUZ8 300 aaPredicted RBP11.26□□□□□ -0.61
CCDC78-216ENST00000544996 NPIPB6E9PJ23 425 aa11.26□□□□□ -0.61
CCDC78-216ENST00000544996 M0R3E3 92 aa11.26□□□□□ -0.61
CCDC78-216ENST00000544996 OR10J4P0C629 311 aa11.26□□□□□ -0.61
CCDC78-216ENST00000544996 LEPP41159 167 aa11.26□□□□□ -0.61
CCDC78-216ENST00000544996 TAS2R60P59551 318 aa11.26□□□□□ -0.61
CCDC78-216ENST00000544996 ICAM4Q14773 271 aa11.26□□□□□ -0.61
CCDC78-216ENST00000544996 ACOT6Q3I5F7 207 aaPredicted RBP11.26□□□□□ -0.61
CCDC78-216ENST00000544996 KHDC3LQ587J8 217 aa11.26□□□□□ -0.61
CCDC78-216ENST00000544996 FAM222AQ5U5X8 452 aa11.26□□□□□ -0.61
CCDC78-216ENST00000544996 EXOC3-AS1Q8N2X6 119 aa11.26□□□□□ -0.61
CCDC78-216ENST00000544996 FXYD5Q96DB9 178 aa11.26□□□□□ -0.61
CCDC78-216ENST00000544996 ODF3Q96PU9 254 aa11.26□□□□□ -0.61
CCDC78-216ENST00000544996 C20orf144Q9BQM9 153 aa11.26□□□□□ -0.61
CCDC78-216ENST00000544996 RYR3Q15413 4870 aa11.25□□□□□ -0.61
CCDC78-216ENST00000544996 H7BYZ3 331 aa11.25□□□□□ -0.61
CCDC78-216ENST00000544996 HTN1P15515 57 aa11.25□□□□□ -0.61
CCDC78-216ENST00000544996 M6PRP20645 277 aa11.25□□□□□ -0.61
CCDC78-216ENST00000544996 NIPSNAP3BQ9BS92 247 aa11.25□□□□□ -0.61
CCDC78-216ENST00000544996 A0A1W2PPV4 95 aa11.24□□□□□ -0.61
CCDC78-216ENST00000544996 CT45A10P0DMU9 189 aa11.24□□□□□ -0.61
CCDC78-216ENST00000544996 UBE2L3P68036 154 aaKnown RBP11.24□□□□□ -0.61
CCDC78-216ENST00000544996 Q5BKY6 102 aa11.24□□□□□ -0.61
CCDC78-216ENST00000544996 FAM122CQ6P4D5 195 aa11.24□□□□□ -0.61
CCDC78-216ENST00000544996 OR2T35Q8NGX2 323 aa11.24□□□□□ -0.61
CCDC78-216ENST00000544996 LINC00477Q96M19 166 aa11.24□□□□□ -0.61
CCDC78-216ENST00000544996 FXYD6-FXYD2A0A087WZ82 144 aa11.23□□□□□ -0.61
CCDC78-216ENST00000544996 PRM2P04554 102 aa11.23□□□□□ -0.61
CCDC78-216ENST00000544996 CSN1S1P47710 185 aa11.23□□□□□ -0.61
CCDC78-216ENST00000544996 RANP62826 216 aaKnown RBP11.23□□□□□ -0.61
CCDC78-216ENST00000544996 GFI1BQ5VTD9 330 aa11.23□□□□□ -0.61
CCDC78-216ENST00000544996 LGALS9CQ6DKI2 356 aa11.23□□□□□ -0.61
CCDC78-216ENST00000544996 LYPD1Q8N2G4 141 aa11.23□□□□□ -0.61
CCDC78-216ENST00000544996 IGHV4-4A0A075B6R2 117 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 LYRM9A8MSI8 78 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 J3KRW8 73 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 DAD1P61803 113 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 ERCC8Q13216 396 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 KIR3DS1Q14943 382 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 TMEM78Q5T7P6 136 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 ZNF493Q6ZR52 646 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 HSD17B11Q8NBQ5 300 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 OR10G4Q8NGN3 311 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 OR10G9Q8NGN4 311 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 OR10G7Q8NGN6 311 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 ZNF503Q96F45 646 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 PHYHIPLQ96FC7 376 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 C16orf74Q96GX8 76 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 PSMG3Q9BT73 122 aaPredicted RBP11.22□□□□□ -0.61
CCDC78-216ENST00000544996 AGPAT4-IT1Q9H0P7 198 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 APLNQ9ULZ1 77 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 SACSQ9NZJ4 4579 aa11.22□□□□□ -0.61
CCDC78-216ENST00000544996 SLC25A5P05141 298 aaKnown RBP11.21□□□□□ -0.61
CCDC78-216ENST00000544996 AZU1P20160 251 aa11.21□□□□□ -0.61
CCDC78-216ENST00000544996 RAB2AP61019 212 aa11.21□□□□□ -0.61
CCDC78-216ENST00000544996 PQLC2Q6ZP29 291 aa11.21□□□□□ -0.61
CCDC78-216ENST00000544996 C9orf47Q6ZRZ4 202 aa11.21□□□□□ -0.61
CCDC78-216ENST00000544996 CCDC28AQ8IWP9 274 aa11.21□□□□□ -0.61
CCDC78-216ENST00000544996 OR2G3Q8NGZ4 309 aa11.21□□□□□ -0.61
CCDC78-216ENST00000544996 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
CCDC78-216ENST00000544996 TNFSF18Q9UNG2 199 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms