RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 MAP1AP78559 2803 aaPredicted RBP12.3□□□□□ -0.44
SPDEF-202ENST00000544425 LINC00587B1AMM8 73 aa12.3□□□□□ -0.44
SPDEF-202ENST00000544425 P01737 135 aa12.3□□□□□ -0.44
SPDEF-202ENST00000544425 UNQ9165/PRO28630Q6UXU0 137 aa12.3□□□□□ -0.44
SPDEF-202ENST00000544425 OR4B1Q8NGF8 309 aa12.3□□□□□ -0.44
SPDEF-202ENST00000544425 RPP21Q9H633 154 aaKnown RBP12.3□□□□□ -0.44
SPDEF-202ENST00000544425 NAT8BQ9UHF3 227 aa12.3□□□□□ -0.44
SPDEF-202ENST00000544425 CHEK1O14757 476 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 ZNF207O43670 478 aaKnown RBP12.29□□□□□ -0.44
SPDEF-202ENST00000544425 CA1P00915 261 aaPredicted RBP12.29□□□□□ -0.44
SPDEF-202ENST00000544425 SLC35B1P78383 322 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 COA6Q5JTJ3 125 aaKnown RBP12.29□□□□□ -0.44
SPDEF-202ENST00000544425 LCN12Q6JVE5 192 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 WDR73Q6P4I2 378 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 RASL11AQ6T310 242 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 LCNL1Q6ZST4 164 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 Q8N2B8 174 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 GLMPQ8WWB7 406 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 GPR61Q9BZJ8 451 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 CLEC5AQ9NY25 188 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 FASNP49327 2511 aaKnown RBP12.29□□□□□ -0.44
SPDEF-202ENST00000544425 IGHV3-66A0A0C4DH42 116 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 A0A1W2PS18 150 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 FAM231BA6NCW3 169 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 A8MWL6 223 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 SMAD7O15105 426 aaKnown RBP12.29□□□□□ -0.44
SPDEF-202ENST00000544425 ELANEP08246 267 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 FOXE3Q13461 319 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 SAPCD1Q5SSQ6 148 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 CDPF1Q6NVV7 123 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 SIGLECL1Q8N7X8 197 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 MRPL53Q96EL3 112 aaKnown RBP12.29□□□□□ -0.44
SPDEF-202ENST00000544425 GFRA4Q9GZZ7 299 aa12.29□□□□□ -0.44
SPDEF-202ENST00000544425 ABCA12Q86UK0 2595 aa12.28□□□□□ -0.44
SPDEF-202ENST00000544425 MT-ND6P03923 174 aa12.28□□□□□ -0.44
SPDEF-202ENST00000544425 TCL1AP56279 114 aa12.28□□□□□ -0.44
SPDEF-202ENST00000544425 GPHB5Q86YW7 130 aa12.28□□□□□ -0.44
SPDEF-202ENST00000544425 GBGT1Q8N5D6 347 aa12.28□□□□□ -0.44
SPDEF-202ENST00000544425 NUP35Q8NFH5 326 aa12.28□□□□□ -0.44
SPDEF-202ENST00000544425 IGHV3OR16-13A0A075B7E8 117 aa12.27□□□□□ -0.44
SPDEF-202ENST00000544425 NBPF19A0A087WUL8 3843 aa12.27□□□□□ -0.44
SPDEF-202ENST00000544425 IGHV3-74A0A0B4J1X5 117 aa12.27□□□□□ -0.44
SPDEF-202ENST00000544425 RBAKDNA6NC62 111 aa12.27□□□□□ -0.44
SPDEF-202ENST00000544425 K7EMT4 169 aa12.27□□□□□ -0.44
SPDEF-202ENST00000544425 RNF152Q8N8N0 203 aa12.27□□□□□ -0.44
SPDEF-202ENST00000544425 MYOZ3Q8TDC0 251 aa12.27□□□□□ -0.44
SPDEF-202ENST00000544425 WIPF2Q8TF74 440 aaPredicted RBP12.27□□□□□ -0.44
SPDEF-202ENST00000544425 ZC2HC1AQ96GY0 325 aa12.27□□□□□ -0.44
SPDEF-202ENST00000544425 NEU1Q99519 415 aa12.27□□□□□ -0.44
SPDEF-202ENST00000544425 IGHV3-49A0A0A0MS15 119 aa12.27□□□□□ -0.45
SPDEF-202ENST00000544425 CBLN1P23435 193 aa12.27□□□□□ -0.45
SPDEF-202ENST00000544425 LINC00469Q8N7U9 141 aa12.27□□□□□ -0.45
SPDEF-202ENST00000544425 IGKV2-40A0A087WW87 121 aaPredicted RBP12.26□□□□□ -0.45
SPDEF-202ENST00000544425 CD5LO43866 347 aa12.26□□□□□ -0.45
SPDEF-202ENST00000544425 IGKV2D-40P01614 121 aaPredicted RBP12.26□□□□□ -0.45
SPDEF-202ENST00000544425 HLA-DMBP28068 263 aa12.26□□□□□ -0.45
SPDEF-202ENST00000544425 FAM106AQ4KMX7 169 aa12.26□□□□□ -0.45
SPDEF-202ENST00000544425 IGFL4Q6B9Z1 124 aa12.26□□□□□ -0.45
SPDEF-202ENST00000544425 C8orf86Q6ZUL3 223 aa12.26□□□□□ -0.45
SPDEF-202ENST00000544425 PRR25Q96S07 402 aa12.26□□□□□ -0.45
SPDEF-202ENST00000544425 MRPL18Q9H0U6 180 aaKnown RBP12.26□□□□□ -0.45
SPDEF-202ENST00000544425 TRAV8-2A0A0B4J237 113 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 HIGD1CA8MV81 97 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 SNURFLB1AK76 121 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 FRMD6-AS1P0C7T7 363 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 CRIP1P50238 77 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 FOXA3P55318 350 aaPredicted RBP12.25□□□□□ -0.45
SPDEF-202ENST00000544425 C10orf99Q6UWK7 81 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 TMEM136Q6ZRR5 245 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 ATP5L2Q7Z4Y8 100 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 OR10D4PQ8NGN7 298 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 IGHV7-4-1A0A0J9YVY3 117 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 XKRY2A2RUG3 117 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 ZNF705FA8MVS1 300 aaPredicted RBP12.25□□□□□ -0.45
SPDEF-202ENST00000544425 SPINK4O60575 86 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 CT45A10P0DMU9 189 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 S100A2P29034 98 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 KRTAP1-1Q07627 177 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 PDZD11Q5EBL8 140 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 DAZ1Q9NQZ3 744 aaKnown RBP12.25□□□□□ -0.45
SPDEF-202ENST00000544425 CSPG4Q6UVK1 2322 aa12.25□□□□□ -0.45
SPDEF-202ENST00000544425 HLA-DQA1P01909 254 aa12.24□□□□□ -0.45
SPDEF-202ENST00000544425 RPLP1P05386 114 aaKnown RBP12.24□□□□□ -0.45
SPDEF-202ENST00000544425 Q71RC1 249 aaPredicted RBP12.24□□□□□ -0.45
SPDEF-202ENST00000544425 UBE2E2Q96LR5 201 aa12.24□□□□□ -0.45
SPDEF-202ENST00000544425 HIST1H2BLQ99880 126 aa12.24□□□□□ -0.45
SPDEF-202ENST00000544425 VGLL1Q99990 258 aa12.24□□□□□ -0.45
SPDEF-202ENST00000544425 MRPL54Q6P161 138 aaKnown RBP12.23□□□□□ -0.45
SPDEF-202ENST00000544425 IL17RELQ6ZVW7 336 aa12.23□□□□□ -0.45
SPDEF-202ENST00000544425 OR2D3Q8NGH3 330 aa12.23□□□□□ -0.45
SPDEF-202ENST00000544425 GTSF1Q8WW33 167 aa12.23□□□□□ -0.45
SPDEF-202ENST00000544425 SMPXQ9UHP9 88 aa12.23□□□□□ -0.45
SPDEF-202ENST00000544425 C8orf49Q96NF6 230 aa12.23□□□□□ -0.45
SPDEF-202ENST00000544425 PPP1R14DQ9NXH3 145 aa12.23□□□□□ -0.45
SPDEF-202ENST00000544425 UFC1Q9Y3C8 167 aa12.23□□□□□ -0.45
SPDEF-202ENST00000544425 ZANQ9Y493 2812 aa12.22□□□□□ -0.45
SPDEF-202ENST00000544425 A0A1B0GXF2 115 aa12.22□□□□□ -0.45
SPDEF-202ENST00000544425 PRAC2D3DTV9 90 aa12.22□□□□□ -0.45
SPDEF-202ENST00000544425 LGALS1P09382 135 aaKnown RBP12.22□□□□□ -0.45
SPDEF-202ENST00000544425 TM4SF20Q53R12 229 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms