RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 IGLC3P0DOY3 106 aa13.74□□□□□ -0.21
SCARB1-208ENST00000544327 PRR31Q5SQ13 230 aa13.74□□□□□ -0.21
SCARB1-208ENST00000544327 CRIP2P52943 208 aaPredicted RBP13.74□□□□□ -0.21
SCARB1-208ENST00000544327 RPS20P60866 119 aaKnown RBP13.74□□□□□ -0.21
SCARB1-208ENST00000544327 RELQ04864 619 aaPredicted RBP13.74□□□□□ -0.21
SCARB1-208ENST00000544327 LCN12Q6JVE5 192 aa13.74□□□□□ -0.21
SCARB1-208ENST00000544327 EEF1AKMT3Q96AZ1 226 aa13.74□□□□□ -0.21
SCARB1-208ENST00000544327 CCDC140Q96MF4 163 aa13.74□□□□□ -0.21
SCARB1-208ENST00000544327 TMEM70Q9BUB7 260 aa13.74□□□□□ -0.21
SCARB1-208ENST00000544327 HIVEP3Q5T1R4 2406 aa13.73□□□□□ -0.21
SCARB1-208ENST00000544327 TRAV9-2A0A087WT02 112 aa13.73□□□□□ -0.21
SCARB1-208ENST00000544327 TRBV7-1A0A0A6YYK4 115 aa13.73□□□□□ -0.21
SCARB1-208ENST00000544327 BUB3O43684 328 aa13.73□□□□□ -0.21
SCARB1-208ENST00000544327 CLEC3BP05452 202 aa13.73□□□□□ -0.21
SCARB1-208ENST00000544327 M0QZ24 198 aa13.72□□□□□ -0.21
SCARB1-208ENST00000544327 BMI1P35226 326 aa13.72□□□□□ -0.21
SCARB1-208ENST00000544327 C19orf54Q5BKX5 351 aa13.72□□□□□ -0.21
SCARB1-208ENST00000544327 CLPSL1A2RUU4 121 aa13.71□□□□□ -0.21
SCARB1-208ENST00000544327 RBAKDNA6NC62 111 aa13.71□□□□□ -0.21
SCARB1-208ENST00000544327 SLC50A1Q9BRV3 221 aa13.71□□□□□ -0.21
SCARB1-208ENST00000544327 MOB4Q9Y3A3 225 aa13.71□□□□□ -0.21
SCARB1-208ENST00000544327 LINC01548A6NM66 108 aa13.71□□□□□ -0.22
SCARB1-208ENST00000544327 G3V318 75 aa13.71□□□□□ -0.22
SCARB1-208ENST00000544327 VGLL1Q99990 258 aa13.71□□□□□ -0.22
SCARB1-208ENST00000544327 CLEC5AQ9NY25 188 aa13.71□□□□□ -0.22
SCARB1-208ENST00000544327 U3KQK5 164 aa13.71□□□□□ -0.22
SCARB1-208ENST00000544327 COL6A6A6NMZ7 2263 aa13.7□□□□□ -0.22
SCARB1-208ENST00000544327 IGHV1-69DA0A0B4J2H0 117 aa13.7□□□□□ -0.22
SCARB1-208ENST00000544327 LEPROTL1O95214 131 aa13.7□□□□□ -0.22
SCARB1-208ENST00000544327 IGHV1-69P01742 117 aa13.7□□□□□ -0.22
SCARB1-208ENST00000544327 PRB4P10163 310 aaPredicted RBP13.7□□□□□ -0.22
SCARB1-208ENST00000544327 LYZL1Q6UWQ5 148 aa13.7□□□□□ -0.22
SCARB1-208ENST00000544327 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.7□□□□□ -0.22
SCARB1-208ENST00000544327 SPATA12Q7Z6I5 190 aa13.7□□□□□ -0.22
SCARB1-208ENST00000544327 RELNP78509 3460 aa13.7□□□□□ -0.22
SCARB1-208ENST00000544327 NBASA2RRP1 2371 aa13.69□□□□□ -0.22
SCARB1-208ENST00000544327 CLEC19AQ6UXS0 136 aa13.69□□□□□ -0.22
SCARB1-208ENST00000544327 PSMG3-AS1Q96PY0 264 aa13.69□□□□□ -0.22
SCARB1-208ENST00000544327 PIMREGQ9BSJ6 248 aa13.69□□□□□ -0.22
SCARB1-208ENST00000544327 U3KQE9 123 aa13.69□□□□□ -0.22
SCARB1-208ENST00000544327 SYS1-DBNDD2H3BUS1 97 aa13.69□□□□□ -0.22
SCARB1-208ENST00000544327 TCAPO15273 167 aa13.69□□□□□ -0.22
SCARB1-208ENST00000544327 RPLP1P05386 114 aaKnown RBP13.69□□□□□ -0.22
SCARB1-208ENST00000544327 HLA-DMBP28068 263 aa13.69□□□□□ -0.22
SCARB1-208ENST00000544327 MRPL53Q96EL3 112 aaKnown RBP13.69□□□□□ -0.22
SCARB1-208ENST00000544327 MEGF9Q9H1U4 602 aa13.69□□□□□ -0.22
SCARB1-208ENST00000544327 IGHV3-35A0A0C4DH35 117 aa13.68□□□□□ -0.22
SCARB1-208ENST00000544327 IGLC6P0CF74 106 aa13.68□□□□□ -0.22
SCARB1-208ENST00000544327 ZNF80P51504 273 aaPredicted RBP13.68□□□□□ -0.22
SCARB1-208ENST00000544327 FAM104BQ5XKR9 115 aa13.68□□□□□ -0.22
SCARB1-208ENST00000544327 PIFOQ8TCI5 191 aa13.68□□□□□ -0.22
SCARB1-208ENST00000544327 HSPB8Q9UJY1 196 aa13.68□□□□□ -0.22
SCARB1-208ENST00000544327 TACC2O95359 2948 aa13.68□□□□□ -0.22
SCARB1-208ENST00000544327 IGHV3OR16-8A0A075B7F1 116 aa13.67□□□□□ -0.22
SCARB1-208ENST00000544327 FAM223BA6NKX1 122 aa13.67□□□□□ -0.22
SCARB1-208ENST00000544327 NDUFS8O00217 210 aa13.67□□□□□ -0.22
SCARB1-208ENST00000544327 ATP5G2Q06055 141 aa13.67□□□□□ -0.22
SCARB1-208ENST00000544327 PET117Q6UWS5 81 aa13.67□□□□□ -0.22
SCARB1-208ENST00000544327 FAM223AQ8IWN6 122 aa13.67□□□□□ -0.22
SCARB1-208ENST00000544327 ATOH7Q8N100 152 aa13.67□□□□□ -0.22
SCARB1-208ENST00000544327 Q8TAT8 98 aa13.67□□□□□ -0.22
SCARB1-208ENST00000544327 C10orf105Q8TEF2 133 aa13.67□□□□□ -0.22
SCARB1-208ENST00000544327 TPPP3Q9BW30 176 aa13.67□□□□□ -0.22
SCARB1-208ENST00000544327 TRAV41A0A0B4J266 112 aa13.67□□□□□ -0.22
SCARB1-208ENST00000544327 IGFL4Q6B9Z1 124 aa13.67□□□□□ -0.22
SCARB1-208ENST00000544327 LINC00173Q6ZV60 143 aa13.67□□□□□ -0.22
SCARB1-208ENST00000544327 ZNF575Q86XF7 245 aa13.67□□□□□ -0.22
SCARB1-208ENST00000544327 METTL26Q96S19 204 aa13.67□□□□□ -0.22
SCARB1-208ENST00000544327 IGHV4-61A0A0C4DH41 118 aa13.66□□□□□ -0.22
SCARB1-208ENST00000544327 BRI3O95415 125 aa13.66□□□□□ -0.22
SCARB1-208ENST00000544327 MAJINQ3KP22 176 aa13.66□□□□□ -0.22
SCARB1-208ENST00000544327 Q6ZN92 141 aa13.66□□□□□ -0.22
SCARB1-208ENST00000544327 FER1L6-AS1Q8NA97 138 aa13.66□□□□□ -0.22
SCARB1-208ENST00000544327 CNFNQ9BYD5 112 aa13.66□□□□□ -0.22
SCARB1-208ENST00000544327 AP5S1Q9NUS5 200 aa13.66□□□□□ -0.22
SCARB1-208ENST00000544327 WNK2Q9Y3S1 2297 aa13.65□□□□□ -0.22
SCARB1-208ENST00000544327 TMSB15BA0A087X1C1 80 aa13.65□□□□□ -0.22
SCARB1-208ENST00000544327 TMEM213A2RRL7 107 aa13.65□□□□□ -0.22
SCARB1-208ENST00000544327 HNRNPA3P51991 378 aaKnown RBP13.65□□□□□ -0.22
SCARB1-208ENST00000544327 ZNF138P52744 262 aa13.65□□□□□ -0.22
SCARB1-208ENST00000544327 CCL19Q99731 98 aa13.65□□□□□ -0.22
SCARB1-208ENST00000544327 MAP1LC3CQ9BXW4 147 aa13.65□□□□□ -0.22
SCARB1-208ENST00000544327 MRPS16Q9Y3D3 137 aaKnown RBP13.65□□□□□ -0.22
SCARB1-208ENST00000544327 OR4C46A6NHA9 309 aa13.64□□□□□ -0.23
SCARB1-208ENST00000544327 FABP5P3A8MUU1 101 aa13.64□□□□□ -0.23
SCARB1-208ENST00000544327 PRAC2D3DTV9 90 aa13.64□□□□□ -0.23
SCARB1-208ENST00000544327 IGLL1P15814 213 aa13.64□□□□□ -0.23
SCARB1-208ENST00000544327 LINC01559Q495D7 138 aa13.64□□□□□ -0.23
SCARB1-208ENST00000544327 TMEM219Q86XT9 240 aa13.64□□□□□ -0.23
SCARB1-208ENST00000544327 HIF1ANQ9NWT6 349 aa13.64□□□□□ -0.23
SCARB1-208ENST00000544327 FA2HQ7L5A8 372 aa13.64□□□□□ -0.23
SCARB1-208ENST00000544327 TMEM191AQ9H0A3 160 aa13.64□□□□□ -0.23
SCARB1-208ENST00000544327 ST20Q9HBF5 79 aa13.64□□□□□ -0.23
SCARB1-208ENST00000544327 SPTBN1Q01082 2364 aaKnown RBP13.64□□□□□ -0.23
SCARB1-208ENST00000544327 TRAV8-2A0A0B4J237 113 aa13.63□□□□□ -0.23
SCARB1-208ENST00000544327 IGF1P05019 195 aa13.63□□□□□ -0.23
SCARB1-208ENST00000544327 CSN3P07498 182 aa13.63□□□□□ -0.23
SCARB1-208ENST00000544327 TSPOP30536 169 aa13.63□□□□□ -0.23
SCARB1-208ENST00000544327 ORMDL3Q8N138 153 aa13.63□□□□□ -0.23
SCARB1-208ENST00000544327 PPP1R14DQ9NXH3 145 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 254.5 ms