RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 TGFAP01135 160 aa13.19□□□□□ -0.3
PTPRO-209ENST00000543886 PAFAH1B2P68402 229 aa13.19□□□□□ -0.3
PTPRO-209ENST00000543886 Q0VG73 95 aa13.19□□□□□ -0.3
PTPRO-209ENST00000543886 KIAA1644Q3SXP7 199 aa13.19□□□□□ -0.3
PTPRO-209ENST00000543886 Q71RC1 249 aaPredicted RBP13.19□□□□□ -0.3
PTPRO-209ENST00000543886 OR2D3Q8NGH3 330 aa13.19□□□□□ -0.3
PTPRO-209ENST00000543886 BLCAPP62952 87 aa13.19□□□□□ -0.3
PTPRO-209ENST00000543886 MRPL52Q86TS9 123 aaKnown RBP13.19□□□□□ -0.3
PTPRO-209ENST00000543886 ASCL2Q99929 193 aa13.19□□□□□ -0.3
PTPRO-209ENST00000543886 SNHG12Q9BXW3 62 aa13.19□□□□□ -0.3
PTPRO-209ENST00000543886 CSMD2Q7Z408 3487 aa13.18□□□□□ -0.3
PTPRO-209ENST00000543886 A0A087X0K7 114 aa13.18□□□□□ -0.3
PTPRO-209ENST00000543886 IGHV3-66A0A0C4DH42 116 aa13.18□□□□□ -0.3
PTPRO-209ENST00000543886 CT45A10P0DMU9 189 aa13.18□□□□□ -0.3
PTPRO-209ENST00000543886 ARL3P36405 182 aa13.18□□□□□ -0.3
PTPRO-209ENST00000543886 LOXL1Q08397 574 aaPredicted RBP13.18□□□□□ -0.3
PTPRO-209ENST00000543886 RBPMS2Q6ZRY4 209 aaKnown RBP13.18□□□□□ -0.3
PTPRO-209ENST00000543886 MAPK1IP1LQ8NDC0 245 aa13.18□□□□□ -0.3
PTPRO-209ENST00000543886 GTSF1Q8WW33 167 aa13.18□□□□□ -0.3
PTPRO-209ENST00000543886 PGLYRP4Q96LB8 373 aa13.18□□□□□ -0.3
PTPRO-209ENST00000543886 BEX4Q9NWD9 120 aaPredicted RBP13.18□□□□□ -0.3
PTPRO-209ENST00000543886 TP53TG3Q9ULZ0 132 aa13.18□□□□□ -0.3
PTPRO-209ENST00000543886 IGKV2-40A0A087WW87 121 aaPredicted RBP13.17□□□□□ -0.3
PTPRO-209ENST00000543886 FAM231BA6NCW3 169 aa13.17□□□□□ -0.3
PTPRO-209ENST00000543886 FBLL1A6NHQ2 334 aaKnown RBP13.17□□□□□ -0.3
PTPRO-209ENST00000543886 ZNF705FA8MVS1 300 aaPredicted RBP13.17□□□□□ -0.3
PTPRO-209ENST00000543886 RNF223E7ERA6 249 aa13.17□□□□□ -0.3
PTPRO-209ENST00000543886 CHEK1O14757 476 aa13.17□□□□□ -0.3
PTPRO-209ENST00000543886 NUPR1O60356 82 aa13.17□□□□□ -0.3
PTPRO-209ENST00000543886 SERF1AO75920 110 aa13.17□□□□□ -0.3
PTPRO-209ENST00000543886 BRI3O95415 125 aa13.17□□□□□ -0.3
PTPRO-209ENST00000543886 IGKV2D-40P01614 121 aaPredicted RBP13.17□□□□□ -0.3
PTPRO-209ENST00000543886 ZNF705DP0CH99 300 aaPredicted RBP13.17□□□□□ -0.3
PTPRO-209ENST00000543886 ZNF705BP0CI00 300 aaPredicted RBP13.17□□□□□ -0.3
PTPRO-209ENST00000543886 CAMPP49913 170 aa13.17□□□□□ -0.3
PTPRO-209ENST00000543886 KRTAP10-9P60411 292 aa13.17□□□□□ -0.3
PTPRO-209ENST00000543886 USMG5Q96IX5 58 aa13.17□□□□□ -0.3
PTPRO-209ENST00000543886 FBN2P35556 2912 aa13.17□□□□□ -0.3
PTPRO-209ENST00000543886 ZNF207O43670 478 aaKnown RBP13.17□□□□□ -0.3
PTPRO-209ENST00000543886 PPIFP30405 207 aaKnown RBP13.17□□□□□ -0.3
PTPRO-209ENST00000543886 SRIP30626 198 aa13.17□□□□□ -0.3
PTPRO-209ENST00000543886 HBBP68871 147 aa13.17□□□□□ -0.3
PTPRO-209ENST00000543886 SLAQ13239 276 aa13.17□□□□□ -0.3
PTPRO-209ENST00000543886 OR10J3Q5JRS4 329 aa13.17□□□□□ -0.3
PTPRO-209ENST00000543886 CHD6Q8TD26 2715 aa13.16□□□□□ -0.3
PTPRO-209ENST00000543886 A0A1B0GXF2 115 aa13.16□□□□□ -0.3
PTPRO-209ENST00000543886 PF4V1P10720 104 aa13.16□□□□□ -0.3
PTPRO-209ENST00000543886 RAB4AP20338 218 aa13.16□□□□□ -0.3
PTPRO-209ENST00000543886 DEFB113Q30KQ7 82 aa13.16□□□□□ -0.3
PTPRO-209ENST00000543886 DEFB112Q30KQ8 113 aa13.16□□□□□ -0.3
PTPRO-209ENST00000543886 GDF5OSQ5U4N7 250 aa13.16□□□□□ -0.3
PTPRO-209ENST00000543886 IGFL4Q6B9Z1 124 aa13.16□□□□□ -0.3
PTPRO-209ENST00000543886 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTPRO-209ENST00000543886 C16orf54Q6UWD8 224 aa13.16□□□□□ -0.3
PTPRO-209ENST00000543886 C8orf49Q96NF6 230 aa13.16□□□□□ -0.3
PTPRO-209ENST00000543886 IGHV3OR16-13A0A075B7E8 117 aa13.16□□□□□ -0.3
PTPRO-209ENST00000543886 IGHV3-74A0A0B4J1X5 117 aa13.16□□□□□ -0.3
PTPRO-209ENST00000543886 ESDP10768 282 aa13.16□□□□□ -0.3
PTPRO-209ENST00000543886 SAPCD1Q5SSQ6 148 aa13.16□□□□□ -0.3
PTPRO-209ENST00000543886 SLC50A1Q9BRV3 221 aa13.16□□□□□ -0.3
PTPRO-209ENST00000543886 IGHV3-49A0A0A0MS15 119 aa13.15□□□□□ -0.3
PTPRO-209ENST00000543886 F2Z2F3 143 aa13.15□□□□□ -0.3
PTPRO-209ENST00000543886 APOHP02749 345 aaPredicted RBP13.15□□□□□ -0.3
PTPRO-209ENST00000543886 HLA-DMBP28068 263 aa13.15□□□□□ -0.3
PTPRO-209ENST00000543886 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.15□□□□□ -0.3
PTPRO-209ENST00000543886 Q6ZS46 218 aa13.15□□□□□ -0.3
PTPRO-209ENST00000543886 IGHV4-59P01825 116 aa13.14□□□□□ -0.31
PTPRO-209ENST00000543886 LINC00310P59036 64 aa13.14□□□□□ -0.31
PTPRO-209ENST00000543886 Q5PR19 223 aa13.14□□□□□ -0.31
PTPRO-209ENST00000543886 LCN12Q6JVE5 192 aa13.14□□□□□ -0.31
PTPRO-209ENST00000543886 LRRC75A-AS1Q8N1F1 130 aa13.14□□□□□ -0.31
PTPRO-209ENST00000543886 C20orf144Q9BQM9 153 aa13.14□□□□□ -0.31
PTPRO-209ENST00000543886 SSBP4Q9BWG4 385 aaPredicted RBP13.14□□□□□ -0.31
PTPRO-209ENST00000543886 U3KQE9 123 aa13.14□□□□□ -0.31
PTPRO-209ENST00000543886 ANKRD17O75179 2603 aaKnown RBP13.13□□□□□ -0.31
PTPRO-209ENST00000543886 USP9YO00507 2555 aaPredicted RBP13.13□□□□□ -0.31
PTPRO-209ENST00000543886 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.13□□□□□ -0.31
PTPRO-209ENST00000543886 IGHG4P01861 327 aa13.13□□□□□ -0.31
PTPRO-209ENST00000543886 IGHV4-31P0DP07 118 aa13.13□□□□□ -0.31
PTPRO-209ENST00000543886 CRIP1P50238 77 aa13.13□□□□□ -0.31
PTPRO-209ENST00000543886 POLQO75417 2590 aa13.13□□□□□ -0.31
PTPRO-209ENST00000543886 PTPN13Q12923 2485 aa13.13□□□□□ -0.31
PTPRO-209ENST00000543886 NDUFA4O00483 81 aa13.12□□□□□ -0.31
PTPRO-209ENST00000543886 TRBV12-3P01733 135 aa13.12□□□□□ -0.31
PTPRO-209ENST00000543886 IGHV3-11P01762 117 aa13.12□□□□□ -0.31
PTPRO-209ENST00000543886 FAM162BQ5T6X4 162 aa13.12□□□□□ -0.31
PTPRO-209ENST00000543886 TEX43Q6ZNM6 134 aa13.12□□□□□ -0.31
PTPRO-209ENST00000543886 PRR25Q96S07 402 aa13.12□□□□□ -0.31
PTPRO-209ENST00000543886 VGLL1Q99990 258 aa13.12□□□□□ -0.31
PTPRO-209ENST00000543886 SAMD10Q9BYL1 202 aa13.12□□□□□ -0.31
PTPRO-209ENST00000543886 KLK15Q9H2R5 256 aa13.12□□□□□ -0.31
PTPRO-209ENST00000543886 A0A0G2JLM5 398 aa13.12□□□□□ -0.31
PTPRO-209ENST00000543886 IGLV1-40P01703 118 aa13.12□□□□□ -0.31
PTPRO-209ENST00000543886 ZNF705AQ6ZN79 300 aaPredicted RBP13.12□□□□□ -0.31
PTPRO-209ENST00000543886 RNF182Q8N6D2 247 aa13.12□□□□□ -0.31
PTPRO-209ENST00000543886 Q8TAT8 98 aa13.12□□□□□ -0.31
PTPRO-209ENST00000543886 NDFIP1Q9BT67 221 aa13.12□□□□□ -0.31
PTPRO-209ENST00000543886 CELSR1Q9NYQ6 3014 aa13.12□□□□□ -0.31
PTPRO-209ENST00000543886 FOXA3P55318 350 aaPredicted RBP13.11□□□□□ -0.31
PTPRO-209ENST00000543886 Q6ZWC4 215 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 508.2 ms