RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	PET117	Q6UWS5	81 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	LCNL1	Q6ZST4	164 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	MCRIP2	Q9BUT9	160 aa	Known RBP	4.93	□□□□□ -1.62
CIT-213	ENST00000543324	NPCDR1	Q9BY65	106 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	SMAD5-AS1	Q9Y6J3	95 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	NCBP2L	A6PVI3	153 aa	Known RBP	4.92	□□□□□ -1.62
CIT-213	ENST00000543324		H0YJW9	148 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	ATP6V0E1	O15342	81 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	NBR2	O15453	112 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
CIT-213	ENST00000543324	S1PR2	O95136	353 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	NXPH3	O95157	252 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	IGLV2-14	P01704	120 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	STAG3L2	P0CL84	134 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	STAG3L3	P0CL85	134 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	CT45A6	P0DMU7	189 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	CT45A5	P0DMU8	189 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	CT45A7	P0DMV0	189 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	EGR2	P11161	476 aa	Predicted RBP	4.92	□□□□□ -1.62
CIT-213	ENST00000543324	SSBP2	P81877	361 aa	Predicted RBP	4.92	□□□□□ -1.62
CIT-213	ENST00000543324	BATF	Q16520	125 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	RPEL1	Q2QD12	228 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	DEFB136	Q30KP8	78 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	ZNF585B	Q52M93	769 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	KHDC1L	Q5JSQ8	128 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	SPANXN5	Q5MJ07	72 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	SERTAD4-AS1	Q5TG53	156 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	RASL11A	Q6T310	242 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324		Q6ZN92	141 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	BAGE3	Q86Y29	109 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	BAGE2	Q86Y30	109 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	ZNF491	Q8N8L2	437 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	ZNF709	Q8N972	641 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	OR5AN1	Q8NGI8	311 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	OR1L6	Q8NGR2	347 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	GALM	Q96C23	342 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	UBE2E2	Q96LR5	201 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	DUX3	Q96PT4	197 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	TXN2	Q99757	166 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	QTRT1	Q9BXR0	403 aa	Known RBP	4.92	□□□□□ -1.62
CIT-213	ENST00000543324	SAMD10	Q9BYL1	202 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	KLK15	Q9H2R5	256 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	SEPSECS	Q9HD40	501 aa	Known RBP	4.92	□□□□□ -1.62
CIT-213	ENST00000543324	NRN1	Q9NPD7	142 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	TPSG1	Q9NRR2	321 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	WDR83OS	Q9Y284	106 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	VPS13B	Q7Z7G8	4022 aa		4.92	□□□□□ -1.62
CIT-213	ENST00000543324	GRIFIN	A4D1Z8	144 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	SNURFL	B1AK76	121 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324		G3V318	75 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	RRH	O14718	337 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	RAB29	O14966	203 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	ZNF324	O75467	553 aa	Predicted RBP	4.91	□□□□□ -1.62
CIT-213	ENST00000543324	CBLN1	P23435	193 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	TSPO	P30536	169 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	ATP5G3	P48201	142 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	ZNF90	Q03938	601 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	RPL39P5	Q59GN2	51 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	TCF24	Q7RTU0	167 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	NIT1	Q86X76	327 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	OR4C5	Q8NGB2	326 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	OR10P1	Q8NGE3	313 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	SVIP	Q8NHG7	77 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	C5orf30	Q96GV9	206 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	RNF5	Q99942	180 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	RASL11B	Q9BPW5	248 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	GNB4	Q9HAV0	340 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	OSTC	Q9NRP0	149 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	KCNIP1	Q9NZI2	227 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	OR1A1	Q9P1Q5	309 aa		4.91	□□□□□ -1.62
CIT-213	ENST00000543324	TRBV20OR9-2	A0A075B6H5	130 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	TRAV9-2	A0A087WT02	112 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324		A0A1W2PS18	150 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	HSBP1L1	C9JCN9	74 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	TNFSF12	O43508	249 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	CIDEA	O60543	219 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	NDUFB4	O95168	129 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	BRI3	O95415	125 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	CXorf1	O96002	111 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	MT-CO2	P00403	227 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	HLA-DQA1	P01909	254 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	IGKV1-16	P04430	117 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	FRMD6-AS1	P0C7T7	363 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	C3orf79	P0CE67	100 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	OPRK1	P41145	380 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	CX3CL1	P78423	397 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	EIF4EBP1	Q13541	118 aa	Predicted RBP	4.9	□□□□□ -1.63
CIT-213	ENST00000543324	KLF5	Q13887	457 aa	Predicted RBP	4.9	□□□□□ -1.63
CIT-213	ENST00000543324	MRGPRG-AS1	Q2M3A8	158 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	FAM162B	Q5T6X4	162 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	C9orf66	Q5T8R8	295 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	TMEM136	Q6ZRR5	245 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	ZNF114	Q8NC26	417 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	4.9	□□□□□ -1.63
CIT-213	ENST00000543324	NUDT10	Q8NFP7	164 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	OR5T1	Q8NG75	326 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	OR51H1	Q8NH63	302 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	OCC1	Q8TAD7	63 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	SMIM12	Q96EX1	92 aa		4.9	□□□□□ -1.63
CIT-213	ENST00000543324	UHRF2	Q96PU4	802 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms