RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 M0R1W7 72 aa15.85■□□□□ 0.13
HDAC4-215ENST00000543185 IGHV3OR16-8A0A075B7F1 116 aa15.85■□□□□ 0.13
HDAC4-215ENST00000543185 CDKN1AP38936 164 aa15.85■□□□□ 0.13
HDAC4-215ENST00000543185 TCTEX1D4Q5JR98 221 aa15.85■□□□□ 0.13
HDAC4-215ENST00000543185 ANKRD29Q8N6D5 301 aa15.85■□□□□ 0.13
HDAC4-215ENST00000543185 RNASE6Q93091 150 aaKnown RBP15.85■□□□□ 0.13
HDAC4-215ENST00000543185 SCRT1Q9BWW7 348 aa15.85■□□□□ 0.13
HDAC4-215ENST00000543185 RPL15P61313 204 aaKnown RBP15.85■□□□□ 0.13
HDAC4-215ENST00000543185 LYZL4Q96KX0 146 aa15.85■□□□□ 0.13
HDAC4-215ENST00000543185 SPXQ9BT56 116 aa15.85■□□□□ 0.13
HDAC4-215ENST00000543185 MYO9AB2RTY4 2548 aa15.84■□□□□ 0.13
HDAC4-215ENST00000543185 TRGV1A0A0A0MS02 117 aa15.84■□□□□ 0.13
HDAC4-215ENST00000543185 SMIM27A0A1W2PRY6 76 aa15.84■□□□□ 0.13
HDAC4-215ENST00000543185 PFN1P07737 140 aaKnown RBP15.84■□□□□ 0.13
HDAC4-215ENST00000543185 LGALS9BQ3B8N2 356 aa15.84■□□□□ 0.13
HDAC4-215ENST00000543185 LGALS9CQ6DKI2 356 aa15.84■□□□□ 0.13
HDAC4-215ENST00000543185 C1orf122Q6ZSJ8 110 aa15.84■□□□□ 0.13
HDAC4-215ENST00000543185 C14orf178Q8N769 122 aaPredicted RBP15.84■□□□□ 0.13
HDAC4-215ENST00000543185 Q8N8P6 123 aa15.84■□□□□ 0.13
HDAC4-215ENST00000543185 C1orf159Q96HA4 380 aa15.84■□□□□ 0.13
HDAC4-215ENST00000543185 TIMM23O14925 209 aa15.84■□□□□ 0.13
HDAC4-215ENST00000543185 CD33P20138 364 aa15.84■□□□□ 0.13
HDAC4-215ENST00000543185 GAGE5Q13069 117 aa15.84■□□□□ 0.13
HDAC4-215ENST00000543185 GAGE6Q13070 117 aa15.84■□□□□ 0.13
HDAC4-215ENST00000543185 IGLC2P0DOY2 106 aa15.83■□□□□ 0.13
HDAC4-215ENST00000543185 IGLC3P0DOY3 106 aa15.83■□□□□ 0.13
HDAC4-215ENST00000543185 TET2Q6N021 2002 aaPredicted RBP15.83■□□□□ 0.12
HDAC4-215ENST00000543185 PATE3B3GLJ2 98 aa15.83■□□□□ 0.12
HDAC4-215ENST00000543185 FAM231DQ6ZW35 169 aa15.83■□□□□ 0.12
HDAC4-215ENST00000543185 IGHV3-11P01762 117 aa15.83■□□□□ 0.12
HDAC4-215ENST00000543185 IGHG3P01860 377 aa15.83■□□□□ 0.12
HDAC4-215ENST00000543185 LOC102723996A0A087X1L8 192 aa15.83■□□□□ 0.12
HDAC4-215ENST00000543185 HTN3P15516 51 aa15.83■□□□□ 0.12
HDAC4-215ENST00000543185 PPIFP30405 207 aaKnown RBP15.83■□□□□ 0.12
HDAC4-215ENST00000543185 CUL9Q8IWT3 2517 aa15.83■□□□□ 0.12
HDAC4-215ENST00000543185 IGLV3-19P01714 112 aa15.82■□□□□ 0.12
HDAC4-215ENST00000543185 DAZ1Q9NQZ3 744 aaKnown RBP15.82■□□□□ 0.12
HDAC4-215ENST00000543185 SLC25A16P16260 332 aa15.82■□□□□ 0.12
HDAC4-215ENST00000543185 FGF6P10767 208 aa15.82■□□□□ 0.12
HDAC4-215ENST00000543185 CRYGSP22914 178 aa15.82■□□□□ 0.12
HDAC4-215ENST00000543185 H0YJW9 148 aa15.82■□□□□ 0.12
HDAC4-215ENST00000543185 J3KT08 172 aa15.82■□□□□ 0.12
HDAC4-215ENST00000543185 FDCSPQ8NFU4 85 aa15.82■□□□□ 0.12
HDAC4-215ENST00000543185 ACACBO00763 2458 aa15.82■□□□□ 0.12
HDAC4-215ENST00000543185 NOTCH4Q99466 2003 aa15.82■□□□□ 0.12
HDAC4-215ENST00000543185 IGHV1-8P0DP01 117 aa15.82■□□□□ 0.12
HDAC4-215ENST00000543185 AMN1Q8IY45 258 aa15.82■□□□□ 0.12
HDAC4-215ENST00000543185 TCF15Q12870 199 aa15.81■□□□□ 0.12
HDAC4-215ENST00000543185 TRAV40A0A0B4J280 105 aa15.81■□□□□ 0.12
HDAC4-215ENST00000543185 FAM104BQ5XKR9 115 aa15.81■□□□□ 0.12
HDAC4-215ENST00000543185 FOXL2P58012 376 aa15.81■□□□□ 0.12
HDAC4-215ENST00000543185 ZNF474Q6S9Z5 364 aaPredicted RBP15.81■□□□□ 0.12
HDAC4-215ENST00000543185 C5orf64Q2M2E5 130 aa15.81■□□□□ 0.12
HDAC4-215ENST00000543185 FOXG1P55316 489 aaPredicted RBP15.81■□□□□ 0.12
HDAC4-215ENST00000543185 SHANK2-AS3Q9BTD1 123 aa15.81■□□□□ 0.12
HDAC4-215ENST00000543185 ETDBQ3ZM63 59 aa15.8■□□□□ 0.12
HDAC4-215ENST00000543185 IGKV1-5P01602 117 aa15.8■□□□□ 0.12
HDAC4-215ENST00000543185 HLA-DRB4P13762 266 aa15.8■□□□□ 0.12
HDAC4-215ENST00000543185 PKIGQ9Y2B9 76 aa15.8■□□□□ 0.12
HDAC4-215ENST00000543185 HLA-DRB4X5D2U9 266 aa15.8■□□□□ 0.12
HDAC4-215ENST00000543185 ADCYAP1P18509 176 aa15.8■□□□□ 0.12
HDAC4-215ENST00000543185 BVES-AS1Q5T3Y7 98 aa15.8■□□□□ 0.12
HDAC4-215ENST00000543185 F8VRH5 84 aa15.8■□□□□ 0.12
HDAC4-215ENST00000543185 MESP1Q9BRJ9 268 aa15.8■□□□□ 0.12
HDAC4-215ENST00000543185 TP53TG1Q9Y2A0 90 aa15.8■□□□□ 0.12
HDAC4-215ENST00000543185 STPG4Q8N801 248 aa15.79■□□□□ 0.12
HDAC4-215ENST00000543185 TMEM14BQ9NUH8 114 aa15.79■□□□□ 0.12
HDAC4-215ENST00000543185 SMIM20Q8N5G0 67 aa15.79■□□□□ 0.12
HDAC4-215ENST00000543185 IGHV1-3A0A0C4DH29 117 aa15.79■□□□□ 0.12
HDAC4-215ENST00000543185 THBDP07204 575 aa15.79■□□□□ 0.12
HDAC4-215ENST00000543185 IGHV2-5P01817 119 aa15.78■□□□□ 0.12
HDAC4-215ENST00000543185 CCL3L1P16619 93 aa15.78■□□□□ 0.12
HDAC4-215ENST00000543185 NKAPP1Q8N9T2 125 aa15.78■□□□□ 0.12
HDAC4-215ENST00000543185 GAS1P54826 345 aa15.78■□□□□ 0.12
HDAC4-215ENST00000543185 ZCCHC24Q8N2G6 241 aaKnown RBP15.78■□□□□ 0.12
HDAC4-215ENST00000543185 IGKV1D-8A0A087WSZ0 117 aa15.78■□□□□ 0.12
HDAC4-215ENST00000543185 RBM3P98179 157 aaKnown RBP15.78■□□□□ 0.12
HDAC4-215ENST00000543185 CACNA1AO00555 2505 aa15.78■□□□□ 0.12
HDAC4-215ENST00000543185 TFF2Q03403 129 aa15.77■□□□□ 0.12
HDAC4-215ENST00000543185 IGHV3OR16-10A0A075B7F0 116 aa15.77■□□□□ 0.12
HDAC4-215ENST00000543185 ATOX1O00244 68 aa15.77■□□□□ 0.12
HDAC4-215ENST00000543185 TIAF1O95411 115 aa15.77■□□□□ 0.11
HDAC4-215ENST00000543185 VMO1Q7Z5L0 202 aa15.77■□□□□ 0.11
HDAC4-215ENST00000543185 LINC01560Q8TB33 94 aa15.77■□□□□ 0.11
HDAC4-215ENST00000543185 CARD19Q96LW7 228 aa15.77■□□□□ 0.11
HDAC4-215ENST00000543185 C15orf62A8K5M9 175 aa15.77■□□□□ 0.11
HDAC4-215ENST00000543185 TRBV25-1A0A075B6N4 114 aa15.77■□□□□ 0.11
HDAC4-215ENST00000543185 ZNF114Q8NC26 417 aa15.77■□□□□ 0.11
HDAC4-215ENST00000543185 QRFPP83859 136 aa15.76■□□□□ 0.11
HDAC4-215ENST00000543185 ZNF625Q96I27 306 aaPredicted RBP15.76■□□□□ 0.11
HDAC4-215ENST00000543185 NPSP0C0P6 89 aa15.76■□□□□ 0.11
HDAC4-215ENST00000543185 HERVK_113P63121 156 aa15.76■□□□□ 0.11
HDAC4-215ENST00000543185 C2orf66Q6UXQ4 117 aa15.75■□□□□ 0.11
HDAC4-215ENST00000543185 SPATA25Q9BR10 227 aa15.75■□□□□ 0.11
HDAC4-215ENST00000543185 TMEM14CQ9P0S9 112 aa15.75■□□□□ 0.11
HDAC4-215ENST00000543185 A0A1W2PR77 199 aa15.75■□□□□ 0.11
HDAC4-215ENST00000543185 CRLF1O75462 422 aa15.75■□□□□ 0.11
HDAC4-215ENST00000543185 C20orf78Q9BR46 151 aa15.75■□□□□ 0.11
HDAC4-215ENST00000543185 TRAV13-1A0A0B4J241 112 aa15.75■□□□□ 0.11
HDAC4-215ENST00000543185 NTF4P34130 210 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms