RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 FANCD2OSQ96PS1 177 aa13□□□□□ -0.33
KDM2B-216ENST00000543025 ZNF747Q9BV97 191 aa13□□□□□ -0.33
KDM2B-216ENST00000543025 NUDT3O95989 172 aa13□□□□□ -0.33
KDM2B-216ENST00000543025 BCL6BQ8N143 479 aaPredicted RBP13□□□□□ -0.33
KDM2B-216ENST00000543025 PSG9Q00887 426 aa12.99□□□□□ -0.33
KDM2B-216ENST00000543025 C12orf54Q6X4T0 127 aa12.99□□□□□ -0.33
KDM2B-216ENST00000543025 TMEM189A5PLL7 270 aa12.99□□□□□ -0.33
KDM2B-216ENST00000543025 BVES-AS1Q5T3Y7 98 aa12.99□□□□□ -0.33
KDM2B-216ENST00000543025 KLRD1Q13241 179 aa12.98□□□□□ -0.33
KDM2B-216ENST00000543025 FBLN7Q53RD9 439 aa12.98□□□□□ -0.33
KDM2B-216ENST00000543025 LYZL1Q6UWQ5 148 aa12.98□□□□□ -0.33
KDM2B-216ENST00000543025 PMCHL2Q9BQD1 86 aa12.98□□□□□ -0.33
KDM2B-216ENST00000543025 IGHV2-70DA0A0C4DH43 119 aa12.98□□□□□ -0.33
KDM2B-216ENST00000543025 ODF3BA8MYP8 253 aa12.98□□□□□ -0.33
KDM2B-216ENST00000543025 F8W735 103 aaPredicted RBP12.98□□□□□ -0.33
KDM2B-216ENST00000543025 M0R1W7 72 aa12.98□□□□□ -0.33
KDM2B-216ENST00000543025 ZNF562Q6V9R5 426 aa12.98□□□□□ -0.33
KDM2B-216ENST00000543025 IGFBPL1Q8WX77 278 aa12.98□□□□□ -0.33
KDM2B-216ENST00000543025 ARPC1AQ92747 370 aa12.98□□□□□ -0.33
KDM2B-216ENST00000543025 TIMD4Q96H15 378 aa12.98□□□□□ -0.33
KDM2B-216ENST00000543025 D6R8Y8 96 aa12.97□□□□□ -0.33
KDM2B-216ENST00000543025 LY6HO94772 140 aa12.97□□□□□ -0.33
KDM2B-216ENST00000543025 IFI27P40305 119 aaPredicted RBP12.97□□□□□ -0.33
KDM2B-216ENST00000543025 C21orf62Q9NYP8 219 aa12.97□□□□□ -0.33
KDM2B-216ENST00000543025 THYN1Q9P016 225 aa12.97□□□□□ -0.33
KDM2B-216ENST00000543025 SH2D1AO60880 128 aa12.97□□□□□ -0.33
KDM2B-216ENST00000543025 RPL7P18124 248 aaKnown RBP12.97□□□□□ -0.33
KDM2B-216ENST00000543025 TTC9CQ8N5M4 171 aa12.97□□□□□ -0.33
KDM2B-216ENST00000543025 TMSB15BA0A087X1C1 80 aa12.96□□□□□ -0.33
KDM2B-216ENST00000543025 PRTN3P24158 256 aa12.96□□□□□ -0.33
KDM2B-216ENST00000543025 HIST1H1AQ02539 215 aaPredicted RBP12.96□□□□□ -0.33
KDM2B-216ENST00000543025 SAPCD1Q5SSQ6 148 aa12.96□□□□□ -0.33
KDM2B-216ENST00000543025 FAM104BQ5XKR9 115 aa12.96□□□□□ -0.33
KDM2B-216ENST00000543025 COX8CQ7Z4L0 72 aa12.96□□□□□ -0.33
KDM2B-216ENST00000543025 ARL6IP6Q8N6S5 226 aa12.96□□□□□ -0.33
KDM2B-216ENST00000543025 U3KQK5 164 aa12.96□□□□□ -0.33
KDM2B-216ENST00000543025 TACC2O95359 2948 aa12.96□□□□□ -0.34
KDM2B-216ENST00000543025 TMEM213A2RRL7 107 aa12.96□□□□□ -0.34
KDM2B-216ENST00000543025 ORMDL3Q8N138 153 aa12.96□□□□□ -0.34
KDM2B-216ENST00000543025 DEFB125Q8N687 156 aa12.96□□□□□ -0.34
KDM2B-216ENST00000543025 LOC105371242A0A075B767 164 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 NDPQ00604 133 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 AMN1Q8IY45 258 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 SIGLEC8Q9NYZ4 499 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 IGKV2-40A0A087WW87 121 aaPredicted RBP12.95□□□□□ -0.34
KDM2B-216ENST00000543025 MUC21A0A0G2JKD1 596 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 MUC21A0A140T8X8 626 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 A0A1W2PRD5 423 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 A0A1W2PRF3 423 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 A0A1W2PRM7 423 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 FBLL1A6NHQ2 334 aaKnown RBP12.95□□□□□ -0.34
KDM2B-216ENST00000543025 NCBP2LA6PVI3 153 aaKnown RBP12.95□□□□□ -0.34
KDM2B-216ENST00000543025 TAX1BP3O14907 124 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 IGKV2D-40P01614 121 aaPredicted RBP12.95□□□□□ -0.34
KDM2B-216ENST00000543025 FAM106CPP0CH98 169 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 COX8AP10176 69 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 VAMP3Q15836 100 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 FAM106AQ4KMX7 169 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 MUC21Q5SSG8 566 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 PRELID3AQ96N28 172 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 PRR25Q96S07 402 aa12.95□□□□□ -0.34
KDM2B-216ENST00000543025 UBR5O95071 2799 aaPredicted RBP12.94□□□□□ -0.34
KDM2B-216ENST00000543025 A0A096LNJ9 63 aa12.94□□□□□ -0.34
KDM2B-216ENST00000543025 LOC389332A0A1B0GUA5 103 aa12.94□□□□□ -0.34
KDM2B-216ENST00000543025 SCGB2A1O75556 95 aa12.94□□□□□ -0.34
KDM2B-216ENST00000543025 NCR2O95944 276 aa12.94□□□□□ -0.34
KDM2B-216ENST00000543025 CCDC144NLQ6NUI1 221 aa12.94□□□□□ -0.34
KDM2B-216ENST00000543025 OR4C5Q8NGB2 326 aa12.94□□□□□ -0.34
KDM2B-216ENST00000543025 IGHV3-23P01764 117 aa12.93□□□□□ -0.34
KDM2B-216ENST00000543025 LOXL1Q08397 574 aaPredicted RBP12.93□□□□□ -0.34
KDM2B-216ENST00000543025 FLNCQ14315 2725 aa12.93□□□□□ -0.34
KDM2B-216ENST00000543025 A0A087X0K7 114 aa12.93□□□□□ -0.34
KDM2B-216ENST00000543025 OR2T8A6NH00 312 aa12.93□□□□□ -0.34
KDM2B-216ENST00000543025 K7EP13 123 aa12.93□□□□□ -0.34
KDM2B-216ENST00000543025 OR8A1Q8NGG7 326 aa12.93□□□□□ -0.34
KDM2B-216ENST00000543025 RABAC1Q9UI14 185 aa12.93□□□□□ -0.34
KDM2B-216ENST00000543025 SPTBN1Q01082 2364 aaKnown RBP12.92□□□□□ -0.34
KDM2B-216ENST00000543025 EGR2P11161 476 aaPredicted RBP12.92□□□□□ -0.34
KDM2B-216ENST00000543025 GPR183P32249 361 aa12.92□□□□□ -0.34
KDM2B-216ENST00000543025 BMI1P35226 326 aa12.92□□□□□ -0.34
KDM2B-216ENST00000543025 RPS20P60866 119 aaKnown RBP12.92□□□□□ -0.34
KDM2B-216ENST00000543025 SRSF1Q07955 248 aaKnown RBP eCLIP12.92□□□□□ -0.34
KDM2B-216ENST00000543025 MRPL51Q4U2R6 128 aaKnown RBP12.92□□□□□ -0.34
KDM2B-216ENST00000543025 DPF1Q92782 380 aa12.92□□□□□ -0.34
KDM2B-216ENST00000543025 C19orf84I3L1E1 186 aa12.91□□□□□ -0.34
KDM2B-216ENST00000543025 RHOGP84095 191 aa12.91□□□□□ -0.34
KDM2B-216ENST00000543025 VMO1Q7Z5L0 202 aa12.91□□□□□ -0.34
KDM2B-216ENST00000543025 Q8N6K4 173 aa12.91□□□□□ -0.34
KDM2B-216ENST00000543025 FER1L6-AS1Q8NA97 138 aa12.91□□□□□ -0.34
KDM2B-216ENST00000543025 RNASE8Q8TDE3 154 aaKnown RBP12.91□□□□□ -0.34
KDM2B-216ENST00000543025 MYO18BQ8IUG5 2567 aa12.91□□□□□ -0.34
KDM2B-216ENST00000543025 OOSP1A8MZH6 123 aa12.91□□□□□ -0.34
KDM2B-216ENST00000543025 CTSGP08311 255 aa12.91□□□□□ -0.34
KDM2B-216ENST00000543025 PLA2G2AP14555 144 aa12.91□□□□□ -0.34
KDM2B-216ENST00000543025 LGALS9BQ3B8N2 356 aa12.91□□□□□ -0.34
KDM2B-216ENST00000543025 LGALS9CQ6DKI2 356 aa12.91□□□□□ -0.34
KDM2B-216ENST00000543025 C2orf91Q6ZV80 131 aa12.91□□□□□ -0.34
KDM2B-216ENST00000543025 DYNAPQ8N1N2 210 aa12.91□□□□□ -0.34
KDM2B-216ENST00000543025 Q8TAT8 98 aa12.91□□□□□ -0.34
KDM2B-216ENST00000543025 CD5LO43866 347 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms