RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 ARL2-SNX15V9GYD0 113 aa9.01□□□□□ -0.97
DDX55-210ENST00000543016 HLA-DRB4X5D2U9 266 aa9.01□□□□□ -0.97
DDX55-210ENST00000543016 A0A0J9YX75 114 aa9□□□□□ -0.97
DDX55-210ENST00000543016 A0A1W2PRE2 83 aa9□□□□□ -0.97
DDX55-210ENST00000543016 H3BMM0 161 aa9□□□□□ -0.97
DDX55-210ENST00000543016 H3BTX0 84 aa9□□□□□ -0.97
DDX55-210ENST00000543016 HBE1P02100 147 aa9□□□□□ -0.97
DDX55-210ENST00000543016 RANP62826 216 aaKnown RBP9□□□□□ -0.97
DDX55-210ENST00000543016 ACTL10Q5JWF8 245 aa9□□□□□ -0.97
DDX55-210ENST00000543016 TRPT1Q86TN4 253 aaKnown RBP9□□□□□ -0.97
DDX55-210ENST00000543016 SFT2D1Q8WV19 159 aa9□□□□□ -0.97
DDX55-210ENST00000543016 C20orf173Q96LM9 149 aa9□□□□□ -0.97
DDX55-210ENST00000543016 CITED4Q96RK1 184 aa9□□□□□ -0.97
DDX55-210ENST00000543016 B9D2Q9BPU9 175 aa9□□□□□ -0.97
DDX55-210ENST00000543016 WFDC10AQ9H1F0 79 aa9□□□□□ -0.97
DDX55-210ENST00000543016 Q9H3A6 140 aa9□□□□□ -0.97
DDX55-210ENST00000543016 DNAH3Q8TD57 4116 aa9□□□□□ -0.97
DDX55-210ENST00000543016 RBMY1BA6NDE4 496 aaKnown RBP8.99□□□□□ -0.97
DDX55-210ENST00000543016 RBMY1EA6NEQ0 496 aaKnown RBP8.99□□□□□ -0.97
DDX55-210ENST00000543016 BOLA2-SMG1P6H3BVE0 249 aa8.99□□□□□ -0.97
DDX55-210ENST00000543016 SNRPCP09234 159 aaKnown RBP8.99□□□□□ -0.97
DDX55-210ENST00000543016 RBMY1DP0C7P1 496 aaKnown RBP8.99□□□□□ -0.97
DDX55-210ENST00000543016 NHLRC4P0CG21 123 aaPredicted RBP8.99□□□□□ -0.97
DDX55-210ENST00000543016 FHITP49789 147 aa8.99□□□□□ -0.97
DDX55-210ENST00000543016 BLOC1S1P78537 153 aa8.99□□□□□ -0.97
DDX55-210ENST00000543016 ICAM4Q14773 271 aa8.99□□□□□ -0.97
DDX55-210ENST00000543016 RNF182Q8N6D2 247 aa8.99□□□□□ -0.97
DDX55-210ENST00000543016 OR8A1Q8NGG7 326 aa8.99□□□□□ -0.97
DDX55-210ENST00000543016 OR10J6PQ8NGY7 276 aa8.99□□□□□ -0.97
DDX55-210ENST00000543016 CMTM2Q8TAZ6 248 aa8.99□□□□□ -0.97
DDX55-210ENST00000543016 SERTM2A0A1B0GWG4 89 aa8.98□□□□□ -0.97
DDX55-210ENST00000543016 KNCNA6PVL3 124 aa8.98□□□□□ -0.97
DDX55-210ENST00000543016 A8MTW9 85 aa8.98□□□□□ -0.97
DDX55-210ENST00000543016 PMS2P11Q13670 270 aa8.98□□□□□ -0.97
DDX55-210ENST00000543016 C4orf48Q5BLP8 95 aa8.98□□□□□ -0.97
DDX55-210ENST00000543016 IGFL4Q6B9Z1 124 aa8.98□□□□□ -0.97
DDX55-210ENST00000543016 SSX7Q7RTT5 188 aa8.98□□□□□ -0.97
DDX55-210ENST00000543016 IQCF2Q8IXL9 164 aa8.98□□□□□ -0.97
DDX55-210ENST00000543016 EXOC3-AS1Q8N2X6 119 aa8.98□□□□□ -0.97
DDX55-210ENST00000543016 TCEAL7Q9BRU2 100 aa8.98□□□□□ -0.97
DDX55-210ENST00000543016 C1QTNF4Q9BXJ3 329 aa8.98□□□□□ -0.97
DDX55-210ENST00000543016 CSTL1Q9H114 145 aa8.98□□□□□ -0.97
DDX55-210ENST00000543016 RBAKDNA6NC62 111 aa8.97□□□□□ -0.97
DDX55-210ENST00000543016 PGPA6NDG6 321 aa8.97□□□□□ -0.97
DDX55-210ENST00000543016 ZNF705EA8MWA4 302 aaPredicted RBP8.97□□□□□ -0.97
DDX55-210ENST00000543016 EIF3GO75821 320 aaKnown RBP eCLIP8.97□□□□□ -0.97
DDX55-210ENST00000543016 AMBPP02760 352 aa8.97□□□□□ -0.97
DDX55-210ENST00000543016 SLC25A5P05141 298 aaKnown RBP8.97□□□□□ -0.97
DDX55-210ENST00000543016 HLA-DMBP28068 263 aa8.97□□□□□ -0.97
DDX55-210ENST00000543016 FGF8P55075 233 aaPredicted RBP8.97□□□□□ -0.97
DDX55-210ENST00000543016 ZNF124Q15973 351 aa8.97□□□□□ -0.97
DDX55-210ENST00000543016 ALKAL2Q6UX46 152 aa8.97□□□□□ -0.97
DDX55-210ENST00000543016 Q6ZWC4 215 aa8.97□□□□□ -0.97
DDX55-210ENST00000543016 C5orf17Q8NAS9 161 aa8.97□□□□□ -0.97
DDX55-210ENST00000543016 LINC00477Q96M19 166 aa8.97□□□□□ -0.97
DDX55-210ENST00000543016 ODF3Q96PU9 254 aa8.97□□□□□ -0.97
DDX55-210ENST00000543016 FBLL1A6NHQ2 334 aaKnown RBP8.96□□□□□ -0.98
DDX55-210ENST00000543016 ZNF705FA8MVS1 300 aaPredicted RBP8.96□□□□□ -0.98
DDX55-210ENST00000543016 M0R3E3 92 aa8.96□□□□□ -0.98
DDX55-210ENST00000543016 IFNA7P01567 189 aa8.96□□□□□ -0.98
DDX55-210ENST00000543016 RPL35AP18077 110 aaKnown RBP8.96□□□□□ -0.98
DDX55-210ENST00000543016 TSPOP30536 169 aa8.96□□□□□ -0.98
DDX55-210ENST00000543016 TAGLN2P37802 199 aaKnown RBP8.96□□□□□ -0.98
DDX55-210ENST00000543016 CNN1P51911 297 aaKnown RBP8.96□□□□□ -0.98
DDX55-210ENST00000543016 HIST1H1AQ02539 215 aaPredicted RBP8.96□□□□□ -0.98
DDX55-210ENST00000543016 HAGHQ16775 308 aa8.96□□□□□ -0.98
DDX55-210ENST00000543016 TEX261Q6UWH6 196 aa8.96□□□□□ -0.98
DDX55-210ENST00000543016 OR4B1Q8NGF8 309 aa8.96□□□□□ -0.98
DDX55-210ENST00000543016 TXNDC17Q9BRA2 123 aa8.96□□□□□ -0.98
DDX55-210ENST00000543016 PPP1R14DQ9NXH3 145 aa8.96□□□□□ -0.98
DDX55-210ENST00000543016 TP53TG1Q9Y2A0 90 aa8.96□□□□□ -0.98
DDX55-210ENST00000543016 TRBV7-9A0A0J9YWB2 115 aa8.95□□□□□ -0.98
DDX55-210ENST00000543016 NPIPB6E9PJ23 425 aa8.95□□□□□ -0.98
DDX55-210ENST00000543016 F6UB75 175 aa8.95□□□□□ -0.98
DDX55-210ENST00000543016 K7EQM0 130 aa8.95□□□□□ -0.98
DDX55-210ENST00000543016 GDF5OSQ5U4N7 250 aa8.95□□□□□ -0.98
DDX55-210ENST00000543016 C9orf47Q6ZRZ4 202 aa8.95□□□□□ -0.98
DDX55-210ENST00000543016 SPATA25Q9BR10 227 aa8.95□□□□□ -0.98
DDX55-210ENST00000543016 TMPRSS5Q9H3S3 457 aa8.95□□□□□ -0.98
DDX55-210ENST00000543016 ZMAT4Q9H898 229 aa8.95□□□□□ -0.98
DDX55-210ENST00000543016 MANBALQ9NQG1 85 aa8.95□□□□□ -0.98
DDX55-210ENST00000543016 FAM74A7A6NL05 159 aa8.94□□□□□ -0.98
DDX55-210ENST00000543016 DIRC3C9JPN6 131 aa8.94□□□□□ -0.98
DDX55-210ENST00000543016 PRAC2D3DTV9 90 aa8.94□□□□□ -0.98
DDX55-210ENST00000543016 F6UZH7 168 aa8.94□□□□□ -0.98
DDX55-210ENST00000543016 IFNA1P01562 189 aa8.94□□□□□ -0.98
DDX55-210ENST00000543016 NMBP08949 121 aa8.94□□□□□ -0.98
DDX55-210ENST00000543016 SUMO1P63165 101 aaKnown RBP8.94□□□□□ -0.98
DDX55-210ENST00000543016 TMEM78Q5T7P6 136 aa8.94□□□□□ -0.98
DDX55-210ENST00000543016 SBSPONQ8IVN8 264 aa8.94□□□□□ -0.98
DDX55-210ENST00000543016 ZNF680Q8NEM1 530 aa8.94□□□□□ -0.98
DDX55-210ENST00000543016 HIST1H2BAQ96A08 127 aa8.94□□□□□ -0.98
DDX55-210ENST00000543016 TM2D3Q9BRN9 247 aa8.94□□□□□ -0.98
DDX55-210ENST00000543016 EPDR1Q9UM22 224 aa8.94□□□□□ -0.98
DDX55-210ENST00000543016 LENEPQ9Y5L5 61 aa8.94□□□□□ -0.98
DDX55-210ENST00000543016 MEGF8Q7Z7M0 2845 aa8.93□□□□□ -0.98
DDX55-210ENST00000543016 GGTLC3B5MD39 225 aa8.93□□□□□ -0.98
DDX55-210ENST00000543016 CA1P00915 261 aaPredicted RBP8.93□□□□□ -0.98
DDX55-210ENST00000543016 LEPP41159 167 aa8.93□□□□□ -0.98
DDX55-210ENST00000543016 DEFB1P60022 68 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms