RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 HDHD3Q9BSH5 251 aaPredicted RBP4.55□□□□□ -1.68
XRCC4-206ENST00000542685 V9GYY9 64 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 PTPRBP23467 1997 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 IGLV3-12A0A075B6K2 115 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 A0A0G2JRQ6 117 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 MYMXA0A1B0GTQ4 84 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 ATP5LO75964 103 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 NPYP01303 97 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 HBDP02042 147 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 ACYP1P07311 99 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 LGALS1P09382 135 aaKnown RBP4.54□□□□□ -1.68
XRCC4-206ENST00000542685 BCL3P20749 454 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 CRYGSP22914 178 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 RBM11P57052 281 aaKnown RBP4.54□□□□□ -1.68
XRCC4-206ENST00000542685 HERVK_113P63121 156 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 TFF3Q07654 80 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 LINC00173Q6ZV60 143 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 Q71RC1 249 aaPredicted RBP4.54□□□□□ -1.68
XRCC4-206ENST00000542685 C10orf126Q8N4M7 172 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 C15orf53Q8NAA6 179 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 OR1L8Q8NGR8 309 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 SPTSSAQ969W0 71 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 IFI27L1Q96BM0 104 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 C18orf15Q96N68 181 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 RNASE7Q9H1E1 156 aaKnown RBP4.54□□□□□ -1.68
XRCC4-206ENST00000542685 C21orf62Q9NYP8 219 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 CEP192Q8TEP8 1941 aa4.54□□□□□ -1.68
XRCC4-206ENST00000542685 TRBV25-1A0A075B6N4 114 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 TRAV4A0A0B4J268 109 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 A0A1W2PR77 199 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 HIGD1CA8MV81 97 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 NDUFC2-KCTD14E9PQ53 114 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 J3QLI3 93 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 K7ENP7 123 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 CHEK1O14757 476 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 IGKV1-5P01602 117 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 PRSS1P07477 247 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 P0C879 139 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 IGLC6P0CF74 106 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 PPP1CAP62136 330 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 C1orf61Q13536 156 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 DEFB110Q30KQ9 67 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 GDF5OSQ5U4N7 250 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 NABP1Q96AH0 204 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 TIMD4Q96H15 378 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 CYYR1Q96J86 154 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 SPACA5Q96QH8 159 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 RPP21Q9H633 154 aaKnown RBP4.53□□□□□ -1.68
XRCC4-206ENST00000542685 ZNF442Q9H7R0 627 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 PRNDQ9UKY0 176 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 FZR1Q9UM11 496 aa4.53□□□□□ -1.68
XRCC4-206ENST00000542685 ARID1AO14497 2285 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 TRBV7-3A0A075B6L6 115 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 TRAV2A0A0B4J234 112 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 TRAV8-2A0A0B4J237 113 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 TRAV8-4A0A0B4J246 113 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 TINCRA0A1B0GVN0 87 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 LINC01546A6NGU7 62 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 M0R135 149 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 SPINK4O60575 86 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 HLA-DMBP28068 263 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 CXCL5P42830 114 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 CAMPP49913 170 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 FOXA3P55318 350 aaPredicted RBP4.52□□□□□ -1.69
XRCC4-206ENST00000542685 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 PLGLB1Q02325 96 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 ZNF415Q09FC8 603 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 RIGQ13278 110 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 FXYD3Q14802 87 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 C14orf177Q52M58 125 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 C6orf226Q5I0X4 101 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 TMEM170BQ5T4T1 132 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 FAM27BQ5VT28 67 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 HIST2H2BCQ6DN03 193 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 HIST2H2BDQ6DRA6 164 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 SLC25A48Q6ZT89 311 aaKnown RBP4.52□□□□□ -1.69
XRCC4-206ENST00000542685 ANKRD29Q8N6D5 301 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 PATE1Q8WXA2 126 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 SNRNP40Q96DI7 357 aaKnown RBP4.52□□□□□ -1.69
XRCC4-206ENST00000542685 BORCS8Q96FH0 119 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 ZNF799Q96GE5 643 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 ZNF488Q96MN9 340 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 PLEKHA3Q9HB20 300 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 CCL28Q9NRJ3 127 aa4.52□□□□□ -1.69
XRCC4-206ENST00000542685 A8MZ25 164 aa4.51□□□□□ -1.69
XRCC4-206ENST00000542685 USP17L23D6RBM5 183 aa4.51□□□□□ -1.69
XRCC4-206ENST00000542685 K7ERJ3 54 aa4.51□□□□□ -1.69
XRCC4-206ENST00000542685 OVOL1O14753 267 aa4.51□□□□□ -1.69
XRCC4-206ENST00000542685 DPM2O94777 84 aa4.51□□□□□ -1.69
XRCC4-206ENST00000542685 IGKV1-39P01597 117 aa4.51□□□□□ -1.69
XRCC4-206ENST00000542685 IGKV1D-39P04432 117 aa4.51□□□□□ -1.69
XRCC4-206ENST00000542685 COX7CP15954 63 aa4.51□□□□□ -1.69
XRCC4-206ENST00000542685 UBE2D1P51668 147 aa4.51□□□□□ -1.69
XRCC4-206ENST00000542685 CACNG7P62955 275 aa4.51□□□□□ -1.69
XRCC4-206ENST00000542685 EBI3Q14213 229 aa4.51□□□□□ -1.69
XRCC4-206ENST00000542685 GAGE2AQ6NT46 116 aa4.51□□□□□ -1.69
XRCC4-206ENST00000542685 NFAM1Q8NET5 270 aaPredicted RBP4.51□□□□□ -1.69
XRCC4-206ENST00000542685 FAM57AQ8TBR7 257 aa4.51□□□□□ -1.69
XRCC4-206ENST00000542685 PLEKHB2Q96CS7 222 aa4.51□□□□□ -1.69
XRCC4-206ENST00000542685 MCRIP2Q9BUT9 160 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms