RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 ZNF586Q9NXT0 402 aa11.65□□□□□ -0.54
CCND1-205ENST00000542367 OR5AC2Q9NZP5 309 aa11.65□□□□□ -0.54
CCND1-205ENST00000542367 MPDU1O75352 247 aa11.64□□□□□ -0.55
CCND1-205ENST00000542367 HTN1P15515 57 aa11.64□□□□□ -0.55
CCND1-205ENST00000542367 TSPOP30536 169 aa11.64□□□□□ -0.55
CCND1-205ENST00000542367 CYCSP99999 105 aaKnown RBP11.64□□□□□ -0.55
CCND1-205ENST00000542367 TMEM256Q8N2U0 113 aa11.64□□□□□ -0.55
CCND1-205ENST00000542367 POM121L12Q8N7R1 296 aa11.64□□□□□ -0.55
CCND1-205ENST00000542367 OR5C1Q8NGR4 320 aa11.64□□□□□ -0.55
CCND1-205ENST00000542367 OR10J6PQ8NGY7 276 aa11.64□□□□□ -0.55
CCND1-205ENST00000542367 MARVELD1Q9BSK0 173 aa11.64□□□□□ -0.55
CCND1-205ENST00000542367 NPCDR1Q9BY65 106 aa11.64□□□□□ -0.55
CCND1-205ENST00000542367 PARD6GQ9BYG4 376 aaPredicted RBP11.64□□□□□ -0.55
CCND1-205ENST00000542367 SLC25A31Q9H0C2 315 aa11.64□□□□□ -0.55
CCND1-205ENST00000542367 LYRM9A8MSI8 78 aa11.63□□□□□ -0.55
CCND1-205ENST00000542367 H0YIZ8 118 aa11.63□□□□□ -0.55
CCND1-205ENST00000542367 TAS2R60P59551 318 aa11.63□□□□□ -0.55
CCND1-205ENST00000542367 KIR3DS1Q14943 382 aa11.63□□□□□ -0.55
CCND1-205ENST00000542367 FCN2Q15485 313 aa11.63□□□□□ -0.55
CCND1-205ENST00000542367 THAP6Q8TBB0 222 aa11.63□□□□□ -0.55
CCND1-205ENST00000542367 PLAC8L1A1L4L8 177 aa11.62□□□□□ -0.55
CCND1-205ENST00000542367 H2BFSP57053 126 aa11.62□□□□□ -0.55
CCND1-205ENST00000542367 DEFA1P59665 94 aa11.62□□□□□ -0.55
CCND1-205ENST00000542367 DEFA3P59666 94 aa11.62□□□□□ -0.55
CCND1-205ENST00000542367 GCSAMLQ5JQS6 135 aa11.62□□□□□ -0.55
CCND1-205ENST00000542367 TRBV19A0A075B6N1 114 aa11.61□□□□□ -0.55
CCND1-205ENST00000542367 ZNF253O75346 499 aa11.61□□□□□ -0.55
CCND1-205ENST00000542367 DEFB130BP0DP73 79 aa11.61□□□□□ -0.55
CCND1-205ENST00000542367 DEFB130AP0DP74 79 aa11.61□□□□□ -0.55
CCND1-205ENST00000542367 HIST1H1EP10412 219 aaKnown RBP11.61□□□□□ -0.55
CCND1-205ENST00000542367 CLINT1Q14677 625 aa11.61□□□□□ -0.55
CCND1-205ENST00000542367 TMEM88Q6PEY1 159 aa11.61□□□□□ -0.55
CCND1-205ENST00000542367 PPP1R1CQ8WVI7 109 aa11.61□□□□□ -0.55
CCND1-205ENST00000542367 TMEM14CQ9P0S9 112 aa11.61□□□□□ -0.55
CCND1-205ENST00000542367 H7BYZ3 331 aa11.6□□□□□ -0.55
CCND1-205ENST00000542367 SSNA1O43805 119 aa11.6□□□□□ -0.55
CCND1-205ENST00000542367 CT45A10P0DMU9 189 aa11.6□□□□□ -0.55
CCND1-205ENST00000542367 PYYP10082 97 aa11.6□□□□□ -0.55
CCND1-205ENST00000542367 GFI1BQ5VTD9 330 aa11.6□□□□□ -0.55
CCND1-205ENST00000542367 C16orf74Q96GX8 76 aa11.6□□□□□ -0.55
CCND1-205ENST00000542367 C20orf144Q9BQM9 153 aa11.6□□□□□ -0.55
CCND1-205ENST00000542367 TIMM9Q9Y5J7 89 aa11.6□□□□□ -0.55
CCND1-205ENST00000542367 NPIPB6E9PJ23 425 aa11.59□□□□□ -0.55
CCND1-205ENST00000542367 J3KRW8 73 aa11.59□□□□□ -0.55
CCND1-205ENST00000542367 M0R3E3 92 aa11.59□□□□□ -0.55
CCND1-205ENST00000542367 NDUFB4O95168 129 aa11.59□□□□□ -0.55
CCND1-205ENST00000542367 ZNF493Q6ZR52 646 aa11.59□□□□□ -0.55
CCND1-205ENST00000542367 BLNKQ8WV28 456 aa11.59□□□□□ -0.55
CCND1-205ENST00000542367 WDR61Q9GZS3 305 aaKnown RBP11.59□□□□□ -0.55
CCND1-205ENST00000542367 TIMM8BQ9Y5J9 83 aaPredicted RBP11.59□□□□□ -0.55
CCND1-205ENST00000542367 LEPP41159 167 aa11.58□□□□□ -0.56
CCND1-205ENST00000542367 PDE6HQ13956 83 aa11.58□□□□□ -0.56
CCND1-205ENST00000542367 MIR17HGQ75NE6 70 aa11.58□□□□□ -0.56
CCND1-205ENST00000542367 UBE2DNLQ8IWF7 75 aa11.58□□□□□ -0.56
CCND1-205ENST00000542367 RNASE8Q8TDE3 154 aaKnown RBP11.58□□□□□ -0.56
CCND1-205ENST00000542367 TMEM263Q8WUH6 116 aaKnown RBP11.58□□□□□ -0.56
CCND1-205ENST00000542367 MRPL53Q96EL3 112 aaKnown RBP11.58□□□□□ -0.56
CCND1-205ENST00000542367 ODF3Q96PU9 254 aa11.58□□□□□ -0.56
CCND1-205ENST00000542367 SLC25A2Q9BXI2 301 aa11.58□□□□□ -0.56
CCND1-205ENST00000542367 BATF3Q9NR55 127 aa11.58□□□□□ -0.56
CCND1-205ENST00000542367 DNAH2Q9P225 4427 aa11.58□□□□□ -0.56
CCND1-205ENST00000542367 TRAV12-3A0A0B4J271 114 aa11.57□□□□□ -0.56
CCND1-205ENST00000542367 M0R2N4 97 aa11.57□□□□□ -0.56
CCND1-205ENST00000542367 MPC2O95563 127 aa11.57□□□□□ -0.56
CCND1-205ENST00000542367 ERCC8Q13216 396 aa11.57□□□□□ -0.56
CCND1-205ENST00000542367 CCDC28AQ8IWP9 274 aa11.57□□□□□ -0.56
CCND1-205ENST00000542367 EXOC3-AS1Q8N2X6 119 aa11.57□□□□□ -0.56
CCND1-205ENST00000542367 FAM167A-AS1Q96KT0 104 aa11.57□□□□□ -0.56
CCND1-205ENST00000542367 NOP10Q9NPE3 64 aaKnown RBP11.57□□□□□ -0.56
CCND1-205ENST00000542367 PRELID1Q9Y255 219 aa11.57□□□□□ -0.56
CCND1-205ENST00000542367 CBY3A6NI87 242 aa11.56□□□□□ -0.56
CCND1-205ENST00000542367 F5H768 121 aa11.56□□□□□ -0.56
CCND1-205ENST00000542367 ATP5G1P05496 136 aa11.56□□□□□ -0.56
CCND1-205ENST00000542367 ATP5G3P48201 142 aa11.56□□□□□ -0.56
CCND1-205ENST00000542367 C15orf53Q8NAA6 179 aa11.56□□□□□ -0.56
CCND1-205ENST00000542367 OR51M1Q9H341 326 aa11.56□□□□□ -0.56
CCND1-205ENST00000542367 KCNIP2Q9NS61 270 aa11.56□□□□□ -0.56
CCND1-205ENST00000542367 C17orf112F2Z3M2 114 aa11.55□□□□□ -0.56
CCND1-205ENST00000542367 NBEAP1P0C6P0 100 aa11.55□□□□□ -0.56
CCND1-205ENST00000542367 ICAM4Q14773 271 aa11.55□□□□□ -0.56
CCND1-205ENST00000542367 RNF212Q495C1 297 aa11.55□□□□□ -0.56
CCND1-205ENST00000542367 LINC00477Q96M19 166 aa11.55□□□□□ -0.56
CCND1-205ENST00000542367 ATP5SQ99766 215 aa11.55□□□□□ -0.56
CCND1-205ENST00000542367 MRPL32Q9BYC8 188 aaKnown RBP11.55□□□□□ -0.56
CCND1-205ENST00000542367 AGPAT4-IT1Q9H0P7 198 aa11.55□□□□□ -0.56
CCND1-205ENST00000542367 AAMDCQ9H7C9 122 aa11.55□□□□□ -0.56
CCND1-205ENST00000542367 HSPB11Q9Y547 144 aa11.55□□□□□ -0.56
CCND1-205ENST00000542367 FAT2Q9NYQ8 4349 aa11.54□□□□□ -0.56
CCND1-205ENST00000542367 IGLV2-18A0A075B6J9 118 aa11.54□□□□□ -0.56
CCND1-205ENST00000542367 PET100P0DJ07 73 aa11.54□□□□□ -0.56
CCND1-205ENST00000542367 RPL12P30050 165 aaKnown RBP11.54□□□□□ -0.56
CCND1-205ENST00000542367 PAXXQ9BUH6 204 aa11.54□□□□□ -0.56
CCND1-205ENST00000542367 SMIM3Q9BZL3 60 aa11.54□□□□□ -0.56
CCND1-205ENST00000542367 FUT9Q9Y231 359 aa11.54□□□□□ -0.56
CCND1-205ENST00000542367 SLC25A5P05141 298 aaKnown RBP11.53□□□□□ -0.56
CCND1-205ENST00000542367 OR10J4P0C629 311 aa11.53□□□□□ -0.56
CCND1-205ENST00000542367 LGALS9BQ3B8N2 356 aa11.53□□□□□ -0.56
CCND1-205ENST00000542367 FAM122CQ6P4D5 195 aa11.53□□□□□ -0.56
CCND1-205ENST00000542367 RNF141Q8WVD5 230 aa11.53□□□□□ -0.56
CCND1-205ENST00000542367 FXYD5Q96DB9 178 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms