RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 VGLL1Q99990 258 aa13.22□□□□□ -0.29
TMEM50B-210ENST00000542230 ZNF331Q9NQX6 463 aaPredicted RBP13.22□□□□□ -0.29
TMEM50B-210ENST00000542230 C19orf71A6NCJ1 209 aa13.22□□□□□ -0.29
TMEM50B-210ENST00000542230 CRIP1P50238 77 aa13.22□□□□□ -0.29
TMEM50B-210ENST00000542230 HIST2H2BDQ6DRA6 164 aa13.22□□□□□ -0.29
TMEM50B-210ENST00000542230 OR5R1Q8NH85 324 aa13.22□□□□□ -0.29
TMEM50B-210ENST00000542230 Q8TAT8 98 aa13.22□□□□□ -0.29
TMEM50B-210ENST00000542230 U3KQE9 123 aa13.22□□□□□ -0.29
TMEM50B-210ENST00000542230 CHEK1O14757 476 aa13.21□□□□□ -0.29
TMEM50B-210ENST00000542230 PSMB8P28062 276 aa13.21□□□□□ -0.29
TMEM50B-210ENST00000542230 RPL19P84098 196 aaKnown RBP13.21□□□□□ -0.29
TMEM50B-210ENST00000542230 SIGLECL1Q8N7X8 197 aa13.21□□□□□ -0.29
TMEM50B-210ENST00000542230 TMEM75Q8N9X5 138 aa13.21□□□□□ -0.29
TMEM50B-210ENST00000542230 USMG5Q96IX5 58 aa13.21□□□□□ -0.29
TMEM50B-210ENST00000542230 NEU1Q99519 415 aa13.21□□□□□ -0.29
TMEM50B-210ENST00000542230 NUP35Q8NFH5 326 aa13.21□□□□□ -0.3
TMEM50B-210ENST00000542230 PRSS22Q9GZN4 317 aa13.21□□□□□ -0.3
TMEM50B-210ENST00000542230 ZNF702PQ9H963 129 aa13.21□□□□□ -0.3
TMEM50B-210ENST00000542230 XKRY2A2RUG3 117 aa13.2□□□□□ -0.3
TMEM50B-210ENST00000542230 H3BUA1 57 aa13.2□□□□□ -0.3
TMEM50B-210ENST00000542230 RPLP1P05386 114 aaKnown RBP13.2□□□□□ -0.3
TMEM50B-210ENST00000542230 S100A9P06702 114 aaKnown RBP13.2□□□□□ -0.3
TMEM50B-210ENST00000542230 HIST3H2BBQ8N257 126 aa13.2□□□□□ -0.3
TMEM50B-210ENST00000542230 GTSF1Q8WW33 167 aa13.2□□□□□ -0.3
TMEM50B-210ENST00000542230 GRAMD2BQ96HH9 432 aa13.2□□□□□ -0.3
TMEM50B-210ENST00000542230 OTOGQ6ZRI0 2925 aa13.2□□□□□ -0.3
TMEM50B-210ENST00000542230 GRIFINA4D1Z8 144 aa13.2□□□□□ -0.3
TMEM50B-210ENST00000542230 HIGD1CA8MV81 97 aa13.2□□□□□ -0.3
TMEM50B-210ENST00000542230 SNURFLB1AK76 121 aa13.2□□□□□ -0.3
TMEM50B-210ENST00000542230 BRI3O95415 125 aa13.2□□□□□ -0.3
TMEM50B-210ENST00000542230 CDX1P47902 265 aaPredicted RBP13.2□□□□□ -0.3
TMEM50B-210ENST00000542230 PSG9Q00887 426 aa13.2□□□□□ -0.3
TMEM50B-210ENST00000542230 ERCC8Q13216 396 aa13.2□□□□□ -0.3
TMEM50B-210ENST00000542230 TM4SF20Q53R12 229 aa13.2□□□□□ -0.3
TMEM50B-210ENST00000542230 TRAV8-2A0A0B4J237 113 aa13.19□□□□□ -0.3
TMEM50B-210ENST00000542230 KIAA1644Q3SXP7 199 aa13.19□□□□□ -0.3
TMEM50B-210ENST00000542230 GDF5OSQ5U4N7 250 aa13.19□□□□□ -0.3
TMEM50B-210ENST00000542230 LCN12Q6JVE5 192 aa13.19□□□□□ -0.3
TMEM50B-210ENST00000542230 MRPL18Q9H0U6 180 aaKnown RBP13.19□□□□□ -0.3
TMEM50B-210ENST00000542230 P01737 135 aa13.18□□□□□ -0.3
TMEM50B-210ENST00000542230 RPP21Q9H633 154 aaKnown RBP13.18□□□□□ -0.3
TMEM50B-210ENST00000542230 NIPBLQ6KC79 2804 aaeCLIP13.18□□□□□ -0.3
TMEM50B-210ENST00000542230 TSKUQ8WUA8 353 aa13.18□□□□□ -0.3
TMEM50B-210ENST00000542230 SMIM12Q96EX1 92 aa13.18□□□□□ -0.3
TMEM50B-210ENST00000542230 CSN1S1P47710 185 aa13.17□□□□□ -0.3
TMEM50B-210ENST00000542230 RAB4BP61018 213 aa13.17□□□□□ -0.3
TMEM50B-210ENST00000542230 KRTAP1-1Q07627 177 aa13.17□□□□□ -0.3
TMEM50B-210ENST00000542230 TMEM136Q6ZRR5 245 aa13.17□□□□□ -0.3
TMEM50B-210ENST00000542230 IGKV3-7A0A075B6H7 116 aa13.17□□□□□ -0.3
TMEM50B-210ENST00000542230 TRAV9-1A0A075B6T8 112 aa13.17□□□□□ -0.3
TMEM50B-210ENST00000542230 IZUMO1RA6ND01 250 aa13.17□□□□□ -0.3
TMEM50B-210ENST00000542230 NDUFA4O00483 81 aa13.17□□□□□ -0.3
TMEM50B-210ENST00000542230 NUPR1O60356 82 aa13.17□□□□□ -0.3
TMEM50B-210ENST00000542230 DEFB1P60022 68 aa13.17□□□□□ -0.3
TMEM50B-210ENST00000542230 C8orf86Q6ZUL3 223 aa13.17□□□□□ -0.3
TMEM50B-210ENST00000542230 GBGT1Q8N5D6 347 aa13.17□□□□□ -0.3
TMEM50B-210ENST00000542230 GLMPQ8WWB7 406 aa13.17□□□□□ -0.3
TMEM50B-210ENST00000542230 A0A087X0K7 114 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 K7EQM0 130 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 C16orf54Q6UWD8 224 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 GPHB5Q86YW7 130 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 TMEM256Q8N2U0 113 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 DAZAP1Q96EP5 407 aaKnown RBP13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 ATP6V0BQ99437 205 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 C12orf57Q99622 126 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 PRDM13Q9H4Q3 707 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 ZNF492Q9P255 531 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 A0A0G2JLM5 398 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 TRBV6-1A0A0K0K1D8 114 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 F2Z2F3 143 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 C1orf194Q5T5A4 169 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 PGLYRP4Q96LB8 373 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 NPFFR1Q9GZQ6 430 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 NAT8BQ9UHF3 227 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 ZFP30Q9Y2G7 519 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 SORL1Q92673 2214 aa13.16□□□□□ -0.3
TMEM50B-210ENST00000542230 ZNF705DP0CH99 300 aaPredicted RBP13.15□□□□□ -0.3
TMEM50B-210ENST00000542230 ZNF705BP0CI00 300 aaPredicted RBP13.15□□□□□ -0.3
TMEM50B-210ENST00000542230 FABP4P15090 132 aa13.15□□□□□ -0.3
TMEM50B-210ENST00000542230 ZNF80P51504 273 aaPredicted RBP13.15□□□□□ -0.3
TMEM50B-210ENST00000542230 OR2D3Q8NGH3 330 aa13.15□□□□□ -0.3
TMEM50B-210ENST00000542230 SSBP4Q9BWG4 385 aaPredicted RBP13.15□□□□□ -0.3
TMEM50B-210ENST00000542230 PEF1Q9UBV8 284 aaKnown RBP13.15□□□□□ -0.3
TMEM50B-210ENST00000542230 NPIPB6E9PJ23 425 aa13.15□□□□□ -0.3
TMEM50B-210ENST00000542230 CAMPP49913 170 aa13.15□□□□□ -0.3
TMEM50B-210ENST00000542230 C18orf65Q6ZTR6 163 aa13.15□□□□□ -0.3
TMEM50B-210ENST00000542230 TMEM190Q8WZ59 177 aa13.15□□□□□ -0.3
TMEM50B-210ENST00000542230 C20orf173Q96LM9 149 aa13.15□□□□□ -0.3
TMEM50B-210ENST00000542230 ZNF253O75346 499 aa13.14□□□□□ -0.31
TMEM50B-210ENST00000542230 SRD5A1P18405 259 aa13.14□□□□□ -0.31
TMEM50B-210ENST00000542230 MEOX2P50222 304 aa13.14□□□□□ -0.31
TMEM50B-210ENST00000542230 PRR25Q96S07 402 aa13.14□□□□□ -0.31
TMEM50B-210ENST00000542230 GNB1LQ9BYB4 327 aa13.14□□□□□ -0.31
TMEM50B-210ENST00000542230 TP53TG3Q9ULZ0 132 aa13.14□□□□□ -0.31
TMEM50B-210ENST00000542230 TMSB15BA0A087X1C1 80 aa13.14□□□□□ -0.31
TMEM50B-210ENST00000542230 SLAQ13239 276 aa13.14□□□□□ -0.31
TMEM50B-210ENST00000542230 OR10D4PQ8NGN7 298 aa13.14□□□□□ -0.31
TMEM50B-210ENST00000542230 HIST1H2BLQ99880 126 aa13.14□□□□□ -0.31
TMEM50B-210ENST00000542230 FAM181BA6NEQ2 426 aa13.13□□□□□ -0.31
TMEM50B-210ENST00000542230 ZNF580Q9UK33 172 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms