RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 CNTFRP26992 372 aa11.72□□□□□ -0.53
AC005840.4-201ENST00000541242 MRPL51Q4U2R6 128 aaKnown RBP11.72□□□□□ -0.53
AC005840.4-201ENST00000541242 SH2D6Q7Z4S9 175 aa11.72□□□□□ -0.53
AC005840.4-201ENST00000541242 GATD1Q8NB37 220 aa11.72□□□□□ -0.53
AC005840.4-201ENST00000541242 LINC00574Q9H8X3 128 aa11.72□□□□□ -0.53
AC005840.4-201ENST00000541242 PSG8Q9UQ74 426 aa11.72□□□□□ -0.53
AC005840.4-201ENST00000541242 GAGE12HA6NDE8 117 aa11.72□□□□□ -0.53
AC005840.4-201ENST00000541242 FCN3O75636 299 aa11.72□□□□□ -0.53
AC005840.4-201ENST00000541242 HOXB4P17483 251 aaPredicted RBP11.72□□□□□ -0.53
AC005840.4-201ENST00000541242 TNFAIP6P98066 277 aaPredicted RBP11.72□□□□□ -0.53
AC005840.4-201ENST00000541242 PAX8Q06710 450 aa11.72□□□□□ -0.53
AC005840.4-201ENST00000541242 VGLL1Q99990 258 aa11.72□□□□□ -0.53
AC005840.4-201ENST00000541242 SCNM1Q9BWG6 230 aa11.72□□□□□ -0.53
AC005840.4-201ENST00000541242 PRB3Q04118 309 aaPredicted RBP11.71□□□□□ -0.53
AC005840.4-201ENST00000541242 C3orf36Q3SXR2 165 aa11.71□□□□□ -0.53
AC005840.4-201ENST00000541242 FAM104BQ5XKR9 115 aa11.71□□□□□ -0.53
AC005840.4-201ENST00000541242 ORMDL3Q8N138 153 aa11.71□□□□□ -0.53
AC005840.4-201ENST00000541242 A0A0G2JNJ9 132 aa11.71□□□□□ -0.53
AC005840.4-201ENST00000541242 WI2-2373I1.2A0A1W2PRP0 233 aa11.71□□□□□ -0.53
AC005840.4-201ENST00000541242 SCGB1A1P11684 91 aa11.71□□□□□ -0.53
AC005840.4-201ENST00000541242 CD40P25942 277 aa11.71□□□□□ -0.53
AC005840.4-201ENST00000541242 TMEM133Q9H2Q1 129 aa11.71□□□□□ -0.53
AC005840.4-201ENST00000541242 Q9UFV3 132 aa11.71□□□□□ -0.53
AC005840.4-201ENST00000541242 CEP295Q9C0D2 2601 aa11.71□□□□□ -0.54
AC005840.4-201ENST00000541242 SPTBN4Q9H254 2564 aa11.71□□□□□ -0.54
AC005840.4-201ENST00000541242 GAS8-AS1O95177 125 aa11.7□□□□□ -0.54
AC005840.4-201ENST00000541242 IGHV1-46P01743 117 aa11.7□□□□□ -0.54
AC005840.4-201ENST00000541242 CCDC144NLQ6NUI1 221 aa11.7□□□□□ -0.54
AC005840.4-201ENST00000541242 ZNF493Q6ZR52 646 aa11.7□□□□□ -0.54
AC005840.4-201ENST00000541242 PHLDA1Q8WV24 401 aaPredicted RBP11.7□□□□□ -0.54
AC005840.4-201ENST00000541242 ARPC1AQ92747 370 aa11.7□□□□□ -0.54
AC005840.4-201ENST00000541242 ATP6V0BQ99437 205 aa11.7□□□□□ -0.54
AC005840.4-201ENST00000541242 CHAC1Q9BUX1 264 aa11.7□□□□□ -0.54
AC005840.4-201ENST00000541242 TMEM189A5PLL7 270 aa11.7□□□□□ -0.54
AC005840.4-201ENST00000541242 C16orf97H3BN30 126 aa11.7□□□□□ -0.54
AC005840.4-201ENST00000541242 RBP4P02753 201 aa11.7□□□□□ -0.54
AC005840.4-201ENST00000541242 DLX1P56177 255 aa11.7□□□□□ -0.54
AC005840.4-201ENST00000541242 Q8NA96 180 aa11.7□□□□□ -0.54
AC005840.4-201ENST00000541242 LINC00312Q9Y6C7 94 aa11.7□□□□□ -0.54
AC005840.4-201ENST00000541242 ETDBQ3ZM63 59 aa11.69□□□□□ -0.54
AC005840.4-201ENST00000541242 CD300EQ496F6 205 aaPredicted RBP11.69□□□□□ -0.54
AC005840.4-201ENST00000541242 AMTNQ6UX39 209 aa11.69□□□□□ -0.54
AC005840.4-201ENST00000541242 SPANXB1Q9NS25 103 aaPredicted RBP11.69□□□□□ -0.54
AC005840.4-201ENST00000541242 PKDREJQ9NTG1 2253 aa11.69□□□□□ -0.54
AC005840.4-201ENST00000541242 H3BMG7 143 aa11.69□□□□□ -0.54
AC005840.4-201ENST00000541242 CKS2P33552 79 aa11.69□□□□□ -0.54
AC005840.4-201ENST00000541242 GATA4P43694 442 aa11.69□□□□□ -0.54
AC005840.4-201ENST00000541242 CCL8P80075 99 aa11.69□□□□□ -0.54
AC005840.4-201ENST00000541242 GTSCR1Q86UQ5 136 aa11.69□□□□□ -0.54
AC005840.4-201ENST00000541242 U3KQK5 164 aa11.69□□□□□ -0.54
AC005840.4-201ENST00000541242 CEACAM3P40198 252 aa11.68□□□□□ -0.54
AC005840.4-201ENST00000541242 INSL3P51460 131 aa11.68□□□□□ -0.54
AC005840.4-201ENST00000541242 SCGB2A2Q13296 93 aa11.68□□□□□ -0.54
AC005840.4-201ENST00000541242 VMA21Q3ZAQ7 101 aa11.68□□□□□ -0.54
AC005840.4-201ENST00000541242 TMEM200BQ69YZ2 307 aa11.68□□□□□ -0.54
AC005840.4-201ENST00000541242 TMEM75Q8N9X5 138 aa11.68□□□□□ -0.54
AC005840.4-201ENST00000541242 TRBV19A0A075B6N1 114 aa11.68□□□□□ -0.54
AC005840.4-201ENST00000541242 SPAG8Q99932 426 aaPredicted RBP11.68□□□□□ -0.54
AC005840.4-201ENST00000541242 HHLA3Q9XRX5 114 aa11.68□□□□□ -0.54
AC005840.4-201ENST00000541242 TRBV25-1A0A075B6N4 114 aa11.67□□□□□ -0.54
AC005840.4-201ENST00000541242 A0A1B0GW15 77 aa11.67□□□□□ -0.54
AC005840.4-201ENST00000541242 RAB9AP51151 201 aa11.67□□□□□ -0.54
AC005840.4-201ENST00000541242 ATP5G2Q06055 141 aa11.67□□□□□ -0.54
AC005840.4-201ENST00000541242 ZNF562Q6V9R5 426 aa11.67□□□□□ -0.54
AC005840.4-201ENST00000541242 SIGLEC15Q6ZMC9 328 aa11.67□□□□□ -0.54
AC005840.4-201ENST00000541242 NGBQ9NPG2 151 aa11.67□□□□□ -0.54
AC005840.4-201ENST00000541242 RPL27AP46776 148 aaKnown RBP11.67□□□□□ -0.54
AC005840.4-201ENST00000541242 PRR30Q53SZ7 412 aaPredicted RBP11.67□□□□□ -0.54
AC005840.4-201ENST00000541242 PRRG2O14669 202 aa11.66□□□□□ -0.54
AC005840.4-201ENST00000541242 TWIST1Q15672 202 aa11.66□□□□□ -0.54
AC005840.4-201ENST00000541242 MSRB1Q9NZV6 116 aa11.66□□□□□ -0.54
AC005840.4-201ENST00000541242 SH2D1AO60880 128 aa11.66□□□□□ -0.54
AC005840.4-201ENST00000541242 THBDP07204 575 aa11.66□□□□□ -0.54
AC005840.4-201ENST00000541242 ODF1Q14990 250 aa11.66□□□□□ -0.54
AC005840.4-201ENST00000541242 TMEM14CQ9P0S9 112 aa11.66□□□□□ -0.54
AC005840.4-201ENST00000541242 S4R3C0 116 aa11.66□□□□□ -0.54
AC005840.4-201ENST00000541242 PRSS1P07477 247 aa11.65□□□□□ -0.54
AC005840.4-201ENST00000541242 CT45A10P0DMU9 189 aa11.65□□□□□ -0.54
AC005840.4-201ENST00000541242 LEPP41159 167 aa11.65□□□□□ -0.54
AC005840.4-201ENST00000541242 CEND1Q8N111 149 aa11.65□□□□□ -0.54
AC005840.4-201ENST00000541242 RASL11BQ9BPW5 248 aa11.65□□□□□ -0.54
AC005840.4-201ENST00000541242 TRAV26-1A0A087WT03 109 aa11.65□□□□□ -0.54
AC005840.4-201ENST00000541242 IGLL5B9A064 214 aa11.65□□□□□ -0.54
AC005840.4-201ENST00000541242 EVI2AP22794 236 aa11.65□□□□□ -0.54
AC005840.4-201ENST00000541242 Q6AWC8 147 aa11.65□□□□□ -0.54
AC005840.4-201ENST00000541242 GFRALQ6UXV0 394 aa11.65□□□□□ -0.54
AC005840.4-201ENST00000541242 LCNL1Q6ZST4 164 aa11.65□□□□□ -0.54
AC005840.4-201ENST00000541242 PIEZO1Q92508 2521 aa11.65□□□□□ -0.55
AC005840.4-201ENST00000541242 TPRP12270 2363 aaKnown RBP11.65□□□□□ -0.55
AC005840.4-201ENST00000541242 K7EQM0 130 aa11.64□□□□□ -0.55
AC005840.4-201ENST00000541242 CKS1BP61024 79 aa11.64□□□□□ -0.55
AC005840.4-201ENST00000541242 ADIPOQQ15848 244 aa11.64□□□□□ -0.55
AC005840.4-201ENST00000541242 FOXI2Q6ZQN5 318 aa11.64□□□□□ -0.55
AC005840.4-201ENST00000541242 NUP37Q8NFH4 326 aa11.64□□□□□ -0.55
AC005840.4-201ENST00000541242 TRBV6-1A0A0K0K1D8 114 aa11.64□□□□□ -0.55
AC005840.4-201ENST00000541242 E9PLD3 99 aa11.64□□□□□ -0.55
AC005840.4-201ENST00000541242 IGKV1-17P01599 117 aa11.64□□□□□ -0.55
AC005840.4-201ENST00000541242 GATA1P15976 413 aaPredicted RBP11.64□□□□□ -0.55
AC005840.4-201ENST00000541242 BSPH1Q075Z2 132 aa11.64□□□□□ -0.55
AC005840.4-201ENST00000541242 ZC2HC1BQ5TFG8 222 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms