RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 PRAC2D3DTV9 90 aa9.41□□□□□ -0.9
LTBR-208ENST00000541005 NPIPB6E9PJ23 425 aa9.41□□□□□ -0.9
LTBR-208ENST00000541005 G3V3Q6 166 aa9.41□□□□□ -0.9
LTBR-208ENST00000541005 RHOBP62745 196 aa9.41□□□□□ -0.9
LTBR-208ENST00000541005 BAP18Q8IXM2 172 aa9.41□□□□□ -0.9
LTBR-208ENST00000541005 OR10J6PQ8NGY7 276 aa9.41□□□□□ -0.9
LTBR-208ENST00000541005 PAXXQ9BUH6 204 aa9.41□□□□□ -0.9
LTBR-208ENST00000541005 OR51M1Q9H341 326 aa9.41□□□□□ -0.9
LTBR-208ENST00000541005 CELA1Q9UNI1 258 aa9.41□□□□□ -0.9
LTBR-208ENST00000541005 IGHV3OR16-12A0A075B7B8 117 aa9.4□□□□□ -0.9
LTBR-208ENST00000541005 TEX48A0A1B0GUV7 120 aa9.4□□□□□ -0.9
LTBR-208ENST00000541005 RNF222A6NCQ9 220 aa9.4□□□□□ -0.9
LTBR-208ENST00000541005 HBE1P02100 147 aa9.4□□□□□ -0.9
LTBR-208ENST00000541005 NBEAP1P0C6P0 100 aa9.4□□□□□ -0.9
LTBR-208ENST00000541005 CDKN1BP46527 198 aa9.4□□□□□ -0.9
LTBR-208ENST00000541005 KHDC3LQ587J8 217 aa9.4□□□□□ -0.9
LTBR-208ENST00000541005 TMEM256Q8N2U0 113 aa9.4□□□□□ -0.9
LTBR-208ENST00000541005 OR2T35Q8NGX2 323 aa9.4□□□□□ -0.9
LTBR-208ENST00000541005 OR2G3Q8NGZ4 309 aa9.4□□□□□ -0.9
LTBR-208ENST00000541005 ZNF503Q96F45 646 aa9.4□□□□□ -0.9
LTBR-208ENST00000541005 TNFSF18Q9UNG2 199 aa9.4□□□□□ -0.9
LTBR-208ENST00000541005 ALMS1Q8TCU4 4167 aa9.39□□□□□ -0.91
LTBR-208ENST00000541005 LOC102723971A0A1B0GUV8 181 aa9.39□□□□□ -0.91
LTBR-208ENST00000541005 M0R3E3 92 aa9.39□□□□□ -0.91
LTBR-208ENST00000541005 M6PRP20645 277 aa9.39□□□□□ -0.91
LTBR-208ENST00000541005 TSPOP30536 169 aa9.39□□□□□ -0.91
LTBR-208ENST00000541005 TAS2R45P59539 299 aa9.39□□□□□ -0.91
LTBR-208ENST00000541005 RRN3P1Q2M238 152 aa9.39□□□□□ -0.91
LTBR-208ENST00000541005 C12orf74Q32Q52 190 aa9.39□□□□□ -0.91
LTBR-208ENST00000541005 ACOT6Q3I5F7 207 aaPredicted RBP9.39□□□□□ -0.91
LTBR-208ENST00000541005 INO80EQ8NBZ0 244 aaPredicted RBP9.39□□□□□ -0.91
LTBR-208ENST00000541005 BLNKQ8WV28 456 aa9.39□□□□□ -0.91
LTBR-208ENST00000541005 RNF141Q8WVD5 230 aa9.39□□□□□ -0.91
LTBR-208ENST00000541005 C20orf144Q9BQM9 153 aa9.39□□□□□ -0.91
LTBR-208ENST00000541005 PSMG3Q9BT73 122 aaPredicted RBP9.39□□□□□ -0.91
LTBR-208ENST00000541005 AAMDCQ9H7C9 122 aa9.39□□□□□ -0.91
LTBR-208ENST00000541005 PPP1R14DQ9NXH3 145 aa9.39□□□□□ -0.91
LTBR-208ENST00000541005 TRAV12-2A0A075B6T6 113 aa9.38□□□□□ -0.91
LTBR-208ENST00000541005 OR7C2O60412 319 aa9.38□□□□□ -0.91
LTBR-208ENST00000541005 OR10J4P0C629 311 aa9.38□□□□□ -0.91
LTBR-208ENST00000541005 PRB4P10163 310 aaPredicted RBP9.38□□□□□ -0.91
LTBR-208ENST00000541005 TCTAP57738 103 aa9.38□□□□□ -0.91
LTBR-208ENST00000541005 UBE2L3P68036 154 aaKnown RBP9.38□□□□□ -0.91
LTBR-208ENST00000541005 Q6ZTC4 211 aa9.38□□□□□ -0.91
LTBR-208ENST00000541005 LYPD1Q8N2G4 141 aa9.38□□□□□ -0.91
LTBR-208ENST00000541005 EXOC3-AS1Q8N2X6 119 aa9.38□□□□□ -0.91
LTBR-208ENST00000541005 RPP25LQ8N5L8 163 aaKnown RBP9.38□□□□□ -0.91
LTBR-208ENST00000541005 LINC00476Q8WZB0 136 aa9.38□□□□□ -0.91
LTBR-208ENST00000541005 PHYHIPLQ96FC7 376 aa9.38□□□□□ -0.91
LTBR-208ENST00000541005 TMEM208Q9BTX3 173 aa9.38□□□□□ -0.91
LTBR-208ENST00000541005 DKK2Q9UBU2 259 aa9.38□□□□□ -0.91
LTBR-208ENST00000541005 SACSQ9NZJ4 4579 aa9.38□□□□□ -0.91
LTBR-208ENST00000541005 FXYD6-FXYD2A0A087WZ82 144 aa9.37□□□□□ -0.91
LTBR-208ENST00000541005 TRAV10A0A0B4J240 114 aa9.37□□□□□ -0.91
LTBR-208ENST00000541005 SPART-AS1P0CW21 52 aa9.37□□□□□ -0.91
LTBR-208ENST00000541005 CT45A10P0DMU9 189 aa9.37□□□□□ -0.91
LTBR-208ENST00000541005 ATP6V0CP27449 155 aa9.37□□□□□ -0.91
LTBR-208ENST00000541005 LEPP41159 167 aa9.37□□□□□ -0.91
LTBR-208ENST00000541005 TAS2R60P59551 318 aa9.37□□□□□ -0.91
LTBR-208ENST00000541005 RAB2AP61019 212 aa9.37□□□□□ -0.91
LTBR-208ENST00000541005 ICAM4Q14773 271 aa9.37□□□□□ -0.91
LTBR-208ENST00000541005 PQLC2Q6ZP29 291 aa9.37□□□□□ -0.91
LTBR-208ENST00000541005 C9orf47Q6ZRZ4 202 aa9.37□□□□□ -0.91
LTBR-208ENST00000541005 HSD17B11Q8NBQ5 300 aa9.37□□□□□ -0.91
LTBR-208ENST00000541005 C2CD4CQ8TF44 421 aa9.37□□□□□ -0.91
LTBR-208ENST00000541005 FAM19A4Q96LR4 140 aa9.37□□□□□ -0.91
LTBR-208ENST00000541005 SERF2P84101 59 aa9.36□□□□□ -0.91
LTBR-208ENST00000541005 GFI1BQ5VTD9 330 aa9.36□□□□□ -0.91
LTBR-208ENST00000541005 LINC00477Q96M19 166 aa9.36□□□□□ -0.91
LTBR-208ENST00000541005 YTHDF2Q9Y5A9 579 aaKnown RBP9.36□□□□□ -0.91
LTBR-208ENST00000541005 DNAH1Q9P2D7 4330 aa9.35□□□□□ -0.91
LTBR-208ENST00000541005 A0A1W2PPV4 95 aa9.35□□□□□ -0.91
LTBR-208ENST00000541005 PLAC8L1A1L4L8 177 aa9.35□□□□□ -0.91
LTBR-208ENST00000541005 ZNF705GA8MUZ8 300 aaPredicted RBP9.35□□□□□ -0.91
LTBR-208ENST00000541005 KLLNB2CW77 178 aa9.35□□□□□ -0.91
LTBR-208ENST00000541005 H7BYZ3 331 aa9.35□□□□□ -0.91
LTBR-208ENST00000541005 MBP02144 154 aa9.35□□□□□ -0.91
LTBR-208ENST00000541005 CRISP2P16562 243 aa9.35□□□□□ -0.91
LTBR-208ENST00000541005 EMP1P54849 157 aa9.35□□□□□ -0.91
LTBR-208ENST00000541005 KIR3DS1Q14943 382 aa9.35□□□□□ -0.91
LTBR-208ENST00000541005 FAM222AQ5U5X8 452 aa9.35□□□□□ -0.91
LTBR-208ENST00000541005 OR10G4Q8NGN3 311 aa9.35□□□□□ -0.91
LTBR-208ENST00000541005 OR10G9Q8NGN4 311 aa9.35□□□□□ -0.91
LTBR-208ENST00000541005 OR10G7Q8NGN6 311 aa9.35□□□□□ -0.91
LTBR-208ENST00000541005 GNPNAT1Q96EK6 184 aaPredicted RBP9.35□□□□□ -0.91
LTBR-208ENST00000541005 AGPAT4-IT1Q9H0P7 198 aa9.35□□□□□ -0.91
LTBR-208ENST00000541005 Q9H3A6 140 aa9.35□□□□□ -0.91
LTBR-208ENST00000541005 RYR3Q15413 4870 aa9.34□□□□□ -0.91
LTBR-208ENST00000541005 IGKV2-40A0A087WW87 121 aaPredicted RBP9.34□□□□□ -0.91
LTBR-208ENST00000541005 BORCS7-ASMTA0A0B4J1R7 106 aa9.34□□□□□ -0.91
LTBR-208ENST00000541005 TRBV7-9A0A0J9YWB2 115 aa9.34□□□□□ -0.91
LTBR-208ENST00000541005 RBAKDNA6NC62 111 aa9.34□□□□□ -0.91
LTBR-208ENST00000541005 LYRM9A8MSI8 78 aa9.34□□□□□ -0.91
LTBR-208ENST00000541005 IGKV2D-40P01614 121 aaPredicted RBP9.34□□□□□ -0.91
LTBR-208ENST00000541005 SLC25A5P05141 298 aaKnown RBP9.34□□□□□ -0.91
LTBR-208ENST00000541005 NMBP08949 121 aa9.34□□□□□ -0.91
LTBR-208ENST00000541005 CDC34P49427 236 aaPredicted RBP9.34□□□□□ -0.91
LTBR-208ENST00000541005 ERCC8Q13216 396 aa9.34□□□□□ -0.91
LTBR-208ENST00000541005 RPL7L1Q6DKI1 246 aaKnown RBP9.34□□□□□ -0.91
LTBR-208ENST00000541005 FAM122CQ6P4D5 195 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms