RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 LINC00612Q8N6U2 182 aa9.85□□□□□ -0.83
SNHG1-213ENST00000540725 KRTAP4-5Q9BYR2 181 aa9.85□□□□□ -0.83
SNHG1-213ENST00000540725 PXMP4Q9Y6I8 212 aa9.85□□□□□ -0.83
SNHG1-213ENST00000540725 H3BQ15 152 aa9.84□□□□□ -0.83
SNHG1-213ENST00000540725 L7N2F9 121 aa9.84□□□□□ -0.83
SNHG1-213ENST00000540725 CCSO14618 274 aa9.84□□□□□ -0.83
SNHG1-213ENST00000540725 IGLC2P0DOY2 106 aa9.84□□□□□ -0.83
SNHG1-213ENST00000540725 CAMLGP49069 296 aa9.84□□□□□ -0.83
SNHG1-213ENST00000540725 VAMP2P63027 116 aa9.84□□□□□ -0.83
SNHG1-213ENST00000540725 OR5I1Q13606 314 aa9.84□□□□□ -0.83
SNHG1-213ENST00000540725 RGS21Q2M5E4 152 aa9.84□□□□□ -0.83
SNHG1-213ENST00000540725 CCDC28AQ8IWP9 274 aa9.84□□□□□ -0.83
SNHG1-213ENST00000540725 GNPNAT1Q96EK6 184 aaPredicted RBP9.84□□□□□ -0.83
SNHG1-213ENST00000540725 TRAV26-1A0A087WT03 109 aa9.83□□□□□ -0.84
SNHG1-213ENST00000540725 J3KRW8 73 aa9.83□□□□□ -0.84
SNHG1-213ENST00000540725 IL7P13232 177 aa9.83□□□□□ -0.84
SNHG1-213ENST00000540725 SAT2Q96F10 170 aaPredicted RBP9.83□□□□□ -0.84
SNHG1-213ENST00000540725 C20orf85Q9H1P6 137 aa9.83□□□□□ -0.84
SNHG1-213ENST00000540725 DNAJC4Q9NNZ3 241 aa9.83□□□□□ -0.84
SNHG1-213ENST00000540725 LSM5Q9Y4Y9 91 aaKnown RBP9.83□□□□□ -0.84
SNHG1-213ENST00000540725 A0A0J9YY99 117 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 GAGE12BA1L429 117 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 SNURFLB1AK76 121 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 PFDN1O60925 122 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 GAGE7O76087 117 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 RLN2P04090 185 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 GAGE12FP0CL80 117 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 GAGE12GP0CL81 117 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 GAGE12IP0CL82 117 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 M6PRP20645 277 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 BCAP31P51572 246 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 CAV2P51636 162 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 RAB31Q13636 194 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 MIC13Q5XKP0 118 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 Q6ZRG5 221 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 NRARPQ7Z6K4 114 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 RXFP4Q8TDU9 374 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 ZNF503Q96F45 646 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 Q9H8V8 135 aa9.82□□□□□ -0.84
SNHG1-213ENST00000540725 TRAV5A0A0B4J249 113 aa9.81□□□□□ -0.84
SNHG1-213ENST00000540725 TRAV12-3A0A0B4J271 114 aa9.81□□□□□ -0.84
SNHG1-213ENST00000540725 FAM25EA8MYX2 175 aa9.81□□□□□ -0.84
SNHG1-213ENST00000540725 NPIPB6E9PJ23 425 aa9.81□□□□□ -0.84
SNHG1-213ENST00000540725 CST7O76096 145 aa9.81□□□□□ -0.84
SNHG1-213ENST00000540725 CT45A10P0DMU9 189 aa9.81□□□□□ -0.84
SNHG1-213ENST00000540725 HOXA5P20719 270 aa9.81□□□□□ -0.84
SNHG1-213ENST00000540725 LEPP41159 167 aa9.81□□□□□ -0.84
SNHG1-213ENST00000540725 GUK1Q16774 197 aa9.81□□□□□ -0.84
SNHG1-213ENST00000540725 OR1L4Q8NGR5 311 aa9.81□□□□□ -0.84
SNHG1-213ENST00000540725 ODF3Q96PU9 254 aa9.81□□□□□ -0.84
SNHG1-213ENST00000540725 UQCC1Q9NVA1 299 aa9.81□□□□□ -0.84
SNHG1-213ENST00000540725 WDR83OSQ9Y284 106 aa9.81□□□□□ -0.84
SNHG1-213ENST00000540725 APOBP04114 4563 aaKnown RBP9.81□□□□□ -0.84
SNHG1-213ENST00000540725 FAM24AA6NFZ4 105 aa9.8□□□□□ -0.84
SNHG1-213ENST00000540725 PLA2G10O15496 165 aa9.8□□□□□ -0.84
SNHG1-213ENST00000540725 CDK2AP2O75956 126 aa9.8□□□□□ -0.84
SNHG1-213ENST00000540725 TTC32Q5I0X7 151 aa9.8□□□□□ -0.84
SNHG1-213ENST00000540725 PFDN5Q99471 154 aa9.8□□□□□ -0.84
SNHG1-213ENST00000540725 PYGO2Q9BRQ0 406 aa9.8□□□□□ -0.84
SNHG1-213ENST00000540725 KRTAP1-5Q9BYS1 174 aa9.8□□□□□ -0.84
SNHG1-213ENST00000540725 C11orf1Q9H5F2 150 aa9.8□□□□□ -0.84
SNHG1-213ENST00000540725 ZNF586Q9NXT0 402 aa9.8□□□□□ -0.84
SNHG1-213ENST00000540725 DNAH5Q8TE73 4624 aa9.8□□□□□ -0.84
SNHG1-213ENST00000540725 C5orf51A6NDU8 294 aa9.79□□□□□ -0.84
SNHG1-213ENST00000540725 LYRM1O43325 122 aa9.79□□□□□ -0.84
SNHG1-213ENST00000540725 ZNF431Q8TF32 576 aaPredicted RBP9.79□□□□□ -0.84
SNHG1-213ENST00000540725 Q9H3A6 140 aa9.79□□□□□ -0.84
SNHG1-213ENST00000540725 TRAV6A0A075B6T7 132 aa9.78□□□□□ -0.84
SNHG1-213ENST00000540725 UBE2L5PA0A1B0GUS4 154 aa9.78□□□□□ -0.84
SNHG1-213ENST00000540725 H3BNG1 76 aa9.78□□□□□ -0.84
SNHG1-213ENST00000540725 ZNF253O75346 499 aa9.78□□□□□ -0.84
SNHG1-213ENST00000540725 TCRBP04435 133 aa9.78□□□□□ -0.84
SNHG1-213ENST00000540725 RPL29P47914 159 aaKnown RBP9.78□□□□□ -0.84
SNHG1-213ENST00000540725 BAXQ07812 192 aa9.78□□□□□ -0.84
SNHG1-213ENST00000540725 DAZ2Q13117 558 aaKnown RBP9.78□□□□□ -0.84
SNHG1-213ENST00000540725 ESRGQ1W209 222 aa9.78□□□□□ -0.84
SNHG1-213ENST00000540725 VWC2Q2TAL6 325 aa9.78□□□□□ -0.84
SNHG1-213ENST00000540725 Q6ZTI0 123 aa9.78□□□□□ -0.84
SNHG1-213ENST00000540725 MRPL53Q96EL3 112 aaKnown RBP9.78□□□□□ -0.84
SNHG1-213ENST00000540725 SEC22CQ9BRL7 303 aa9.78□□□□□ -0.84
SNHG1-213ENST00000540725 UPK3BQ9BT76 320 aa9.78□□□□□ -0.84
SNHG1-213ENST00000540725 TMPRSS5Q9H3S3 457 aa9.78□□□□□ -0.84
SNHG1-213ENST00000540725 SLC39A9Q9NUM3 307 aa9.78□□□□□ -0.84
SNHG1-213ENST00000540725 M0R3E3 92 aa9.77□□□□□ -0.84
SNHG1-213ENST00000540725 UPK1BO75841 260 aa9.77□□□□□ -0.84
SNHG1-213ENST00000540725 SLC25A5P05141 298 aaKnown RBP9.77□□□□□ -0.84
SNHG1-213ENST00000540725 PVALBP20472 110 aaPredicted RBP9.77□□□□□ -0.84
SNHG1-213ENST00000540725 SULT1A1P50225 295 aa9.77□□□□□ -0.84
SNHG1-213ENST00000540725 S100A10P60903 97 aa9.77□□□□□ -0.84
SNHG1-213ENST00000540725 SPATA12Q7Z6I5 190 aa9.77□□□□□ -0.84
SNHG1-213ENST00000540725 C12orf45Q8N5I9 185 aaPredicted RBP9.77□□□□□ -0.84
SNHG1-213ENST00000540725 C2orf50Q96LR7 162 aa9.77□□□□□ -0.84
SNHG1-213ENST00000540725 LYRM2Q9NU23 88 aaPredicted RBP9.77□□□□□ -0.84
SNHG1-213ENST00000540725 NUDT15Q9NV35 164 aa9.77□□□□□ -0.84
SNHG1-213ENST00000540725 MRPS16Q9Y3D3 137 aaKnown RBP9.77□□□□□ -0.84
SNHG1-213ENST00000540725 TRBV19A0A075B6N1 114 aa9.76□□□□□ -0.85
SNHG1-213ENST00000540725 IGSF23A1L1A6 192 aa9.76□□□□□ -0.85
SNHG1-213ENST00000540725 C7orf71A4D174 169 aa9.76□□□□□ -0.85
SNHG1-213ENST00000540725 S100A11P31949 105 aa9.76□□□□□ -0.85
SNHG1-213ENST00000540725 ERCC8Q13216 396 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms