RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 SLC39A9Q9NUM3 307 aa7.44□□□□□ -1.22
CDCA3-208ENST00000540683 CELA1Q9UNI1 258 aa7.44□□□□□ -1.22
CDCA3-208ENST00000540683 TIMM8BQ9Y5J9 83 aaPredicted RBP7.44□□□□□ -1.22
CDCA3-208ENST00000540683 TRAV8-2A0A0B4J237 113 aa7.43□□□□□ -1.22
CDCA3-208ENST00000540683 UBE2L5PA0A1B0GUS4 154 aa7.43□□□□□ -1.22
CDCA3-208ENST00000540683 M0R2Z0 102 aa7.43□□□□□ -1.22
CDCA3-208ENST00000540683 CCNKO75909 580 aa7.43□□□□□ -1.22
CDCA3-208ENST00000540683 LEPP41159 167 aa7.43□□□□□ -1.22
CDCA3-208ENST00000540683 RAB32Q13637 225 aa7.43□□□□□ -1.22
CDCA3-208ENST00000540683 PATE2Q6UY27 113 aa7.43□□□□□ -1.22
CDCA3-208ENST00000540683 C1orf158Q8N1D5 194 aa7.43□□□□□ -1.22
CDCA3-208ENST00000540683 RPP25LQ8N5L8 163 aaKnown RBP7.43□□□□□ -1.22
CDCA3-208ENST00000540683 MRPL18Q9H0U6 180 aaKnown RBP7.43□□□□□ -1.22
CDCA3-208ENST00000540683 BATF3Q9NR55 127 aa7.43□□□□□ -1.22
CDCA3-208ENST00000540683 TMEM14CQ9P0S9 112 aa7.43□□□□□ -1.22
CDCA3-208ENST00000540683 TIMM9Q9Y5J7 89 aa7.43□□□□□ -1.22
CDCA3-208ENST00000540683 PLECQ15149 4684 aaKnown RBP7.43□□□□□ -1.22
CDCA3-208ENST00000540683 FAM24AA6NFZ4 105 aa7.42□□□□□ -1.22
CDCA3-208ENST00000540683 HIST1H1EP10412 219 aaKnown RBP7.42□□□□□ -1.22
CDCA3-208ENST00000540683 FGF7P21781 194 aa7.42□□□□□ -1.22
CDCA3-208ENST00000540683 OPCMLQ14982 345 aa7.42□□□□□ -1.22
CDCA3-208ENST00000540683 TMEM263Q8WUH6 116 aaKnown RBP7.42□□□□□ -1.22
CDCA3-208ENST00000540683 TMEM37Q8WXS4 190 aa7.42□□□□□ -1.22
CDCA3-208ENST00000540683 CBY3A6NI87 242 aa7.41□□□□□ -1.22
CDCA3-208ENST00000540683 SNURFLB1AK76 121 aa7.41□□□□□ -1.22
CDCA3-208ENST00000540683 INMT-MINDY4F8WBC2 141 aa7.41□□□□□ -1.22
CDCA3-208ENST00000540683 ATP5G1P05496 136 aa7.41□□□□□ -1.22
CDCA3-208ENST00000540683 IGLC2P0DOY2 106 aa7.41□□□□□ -1.22
CDCA3-208ENST00000540683 HTN3P15516 51 aa7.41□□□□□ -1.22
CDCA3-208ENST00000540683 ATP5G3P48201 142 aa7.41□□□□□ -1.22
CDCA3-208ENST00000540683 DEFB1P60022 68 aa7.41□□□□□ -1.22
CDCA3-208ENST00000540683 ARL16Q0P5N6 197 aa7.41□□□□□ -1.22
CDCA3-208ENST00000540683 IGFL4Q6B9Z1 124 aa7.41□□□□□ -1.22
CDCA3-208ENST00000540683 ZNF767PQ75MW2 155 aa7.41□□□□□ -1.22
CDCA3-208ENST00000540683 ATG101Q9BSB4 218 aa7.41□□□□□ -1.22
CDCA3-208ENST00000540683 NPCDR1Q9BY65 106 aa7.41□□□□□ -1.22
CDCA3-208ENST00000540683 MRPL32Q9BYC8 188 aaKnown RBP7.41□□□□□ -1.22
CDCA3-208ENST00000540683 HYDINQ4G0P3 5121 aa7.4□□□□□ -1.22
CDCA3-208ENST00000540683 MRPS12O15235 138 aaKnown RBP7.4□□□□□ -1.22
CDCA3-208ENST00000540683 CRXO43186 299 aaPredicted RBP7.4□□□□□ -1.22
CDCA3-208ENST00000540683 SSNA1O43805 119 aa7.4□□□□□ -1.22
CDCA3-208ENST00000540683 IFNA5P01569 189 aa7.4□□□□□ -1.22
CDCA3-208ENST00000540683 NMBP08949 121 aa7.4□□□□□ -1.22
CDCA3-208ENST00000540683 CSN1S1P47710 185 aa7.4□□□□□ -1.22
CDCA3-208ENST00000540683 IL15RAQ13261 267 aa7.4□□□□□ -1.22
CDCA3-208ENST00000540683 MIC13Q5XKP0 118 aa7.4□□□□□ -1.22
CDCA3-208ENST00000540683 BAP18Q8IXM2 172 aa7.4□□□□□ -1.22
CDCA3-208ENST00000540683 ZNF680Q8NEM1 530 aa7.4□□□□□ -1.22
CDCA3-208ENST00000540683 OR5C1Q8NGR4 320 aa7.4□□□□□ -1.22
CDCA3-208ENST00000540683 LINC00477Q96M19 166 aa7.4□□□□□ -1.22
CDCA3-208ENST00000540683 C17orf77Q96MU5 243 aa7.4□□□□□ -1.22
CDCA3-208ENST00000540683 PYGO2Q9BRQ0 406 aa7.4□□□□□ -1.22
CDCA3-208ENST00000540683 C11orf1Q9H5F2 150 aa7.4□□□□□ -1.22
CDCA3-208ENST00000540683 TRBV19A0A075B6N1 114 aa7.39□□□□□ -1.23
CDCA3-208ENST00000540683 TRAV12-2A0A075B6T6 113 aa7.39□□□□□ -1.23
CDCA3-208ENST00000540683 IGSF23A1L1A6 192 aa7.39□□□□□ -1.23
CDCA3-208ENST00000540683 ZNF705GA8MUZ8 300 aaPredicted RBP7.39□□□□□ -1.23
CDCA3-208ENST00000540683 SLC25A5P05141 298 aaKnown RBP7.39□□□□□ -1.23
CDCA3-208ENST00000540683 HTN1P15515 57 aa7.39□□□□□ -1.23
CDCA3-208ENST00000540683 TAS2R45P59539 299 aa7.39□□□□□ -1.23
CDCA3-208ENST00000540683 LGALS9BQ3B8N2 356 aa7.39□□□□□ -1.23
CDCA3-208ENST00000540683 SCGB1C1Q8TD33 95 aa7.39□□□□□ -1.23
CDCA3-208ENST00000540683 SAT2Q96F10 170 aaPredicted RBP7.39□□□□□ -1.23
CDCA3-208ENST00000540683 MARVELD1Q9BSK0 173 aa7.39□□□□□ -1.23
CDCA3-208ENST00000540683 TRBV7-9A0A0J9YWB2 115 aa7.38□□□□□ -1.23
CDCA3-208ENST00000540683 NPIPB6E9PJ23 425 aa7.38□□□□□ -1.23
CDCA3-208ENST00000540683 DEFB130BP0DP73 79 aa7.38□□□□□ -1.23
CDCA3-208ENST00000540683 DEFB130AP0DP74 79 aa7.38□□□□□ -1.23
CDCA3-208ENST00000540683 CCL18P55774 89 aa7.38□□□□□ -1.23
CDCA3-208ENST00000540683 LRRC37A5PQ49AS3 106 aa7.38□□□□□ -1.23
CDCA3-208ENST00000540683 FAM74A1Q5RGS3 127 aa7.38□□□□□ -1.23
CDCA3-208ENST00000540683 TMEM78Q5T7P6 136 aa7.38□□□□□ -1.23
CDCA3-208ENST00000540683 CDPF1Q6NVV7 123 aa7.38□□□□□ -1.23
CDCA3-208ENST00000540683 LYPD1Q8N2G4 141 aa7.38□□□□□ -1.23
CDCA3-208ENST00000540683 F5H768 121 aa7.37□□□□□ -1.23
CDCA3-208ENST00000540683 H3BQ15 152 aa7.37□□□□□ -1.23
CDCA3-208ENST00000540683 NBEAP1P0C6P0 100 aa7.37□□□□□ -1.23
CDCA3-208ENST00000540683 KHDC3LQ587J8 217 aa7.37□□□□□ -1.23
CDCA3-208ENST00000540683 TMEM88Q6PEY1 159 aa7.37□□□□□ -1.23
CDCA3-208ENST00000540683 SVIPQ8NHG7 77 aa7.37□□□□□ -1.23
CDCA3-208ENST00000540683 RNASE8Q8TDE3 154 aaKnown RBP7.37□□□□□ -1.23
CDCA3-208ENST00000540683 PPP1R1CQ8WVI7 109 aa7.37□□□□□ -1.23
CDCA3-208ENST00000540683 ZNF503Q96F45 646 aa7.37□□□□□ -1.23
CDCA3-208ENST00000540683 ATP5SQ99766 215 aa7.37□□□□□ -1.23
CDCA3-208ENST00000540683 OR51M1Q9H341 326 aa7.37□□□□□ -1.23
CDCA3-208ENST00000540683 C7orf71A4D174 169 aa7.36□□□□□ -1.23
CDCA3-208ENST00000540683 H3BNG1 76 aa7.36□□□□□ -1.23
CDCA3-208ENST00000540683 SLC17A3O00476 420 aa7.36□□□□□ -1.23
CDCA3-208ENST00000540683 GPX1P07203 203 aa7.36□□□□□ -1.23
CDCA3-208ENST00000540683 NHLH2Q02577 135 aa7.36□□□□□ -1.23
CDCA3-208ENST00000540683 CLINT1Q14677 625 aa7.36□□□□□ -1.23
CDCA3-208ENST00000540683 THAP6Q8TBB0 222 aa7.36□□□□□ -1.23
CDCA3-208ENST00000540683 RXFP4Q8TDU9 374 aa7.36□□□□□ -1.23
CDCA3-208ENST00000540683 ASB13Q8WXK3 278 aa7.36□□□□□ -1.23
CDCA3-208ENST00000540683 LINC00467Q9BRT7 94 aa7.36□□□□□ -1.23
CDCA3-208ENST00000540683 PAXXQ9BUH6 204 aa7.36□□□□□ -1.23
CDCA3-208ENST00000540683 PARD6GQ9BYG4 376 aaPredicted RBP7.36□□□□□ -1.23
CDCA3-208ENST00000540683 WDR61Q9GZS3 305 aaKnown RBP7.36□□□□□ -1.23
CDCA3-208ENST00000540683 ZNF586Q9NXT0 402 aa7.36□□□□□ -1.23
CDCA3-208ENST00000540683 FUT9Q9Y231 359 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms