RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 C16orf74Q96GX8 76 aa14.83□□□□□ -0.04
CHFR-217ENST00000540537 C20orf144Q9BQM9 153 aa14.83□□□□□ -0.04
CHFR-217ENST00000540537 DNAH17Q9UFH2 4485 aa14.83□□□□□ -0.04
CHFR-217ENST00000540537 PRAC2D3DTV9 90 aa14.82□□□□□ -0.04
CHFR-217ENST00000540537 PRAF2O60831 178 aa14.82□□□□□ -0.04
CHFR-217ENST00000540537 UBE2DNLQ8IWF7 75 aa14.82□□□□□ -0.04
CHFR-217ENST00000540537 NMES1Q9C002 83 aa14.82□□□□□ -0.04
CHFR-217ENST00000540537 PTTG2Q9NZH5 202 aa14.82□□□□□ -0.04
CHFR-217ENST00000540537 H7BYZ3 331 aa14.81□□□□□ -0.04
CHFR-217ENST00000540537 RLN2P04090 185 aa14.81□□□□□ -0.04
CHFR-217ENST00000540537 IFITM3Q01628 133 aa14.81□□□□□ -0.04
CHFR-217ENST00000540537 ZNF493Q6ZR52 646 aa14.81□□□□□ -0.04
CHFR-217ENST00000540537 LINC00336Q6ZUF6 198 aa14.81□□□□□ -0.04
CHFR-217ENST00000540537 C15orf53Q8NAA6 179 aa14.81□□□□□ -0.04
CHFR-217ENST00000540537 ZNF586Q9NXT0 402 aa14.81□□□□□ -0.04
CHFR-217ENST00000540537 TMEM14CQ9P0S9 112 aa14.81□□□□□ -0.04
CHFR-217ENST00000540537 DNAH2Q9P225 4427 aa14.81□□□□□ -0.04
CHFR-217ENST00000540537 E5RGE8 158 aa14.8□□□□□ -0.04
CHFR-217ENST00000540537 SIX6O95475 246 aa14.8□□□□□ -0.04
CHFR-217ENST00000540537 DEFB130BP0DP73 79 aa14.8□□□□□ -0.04
CHFR-217ENST00000540537 DEFB130AP0DP74 79 aa14.8□□□□□ -0.04
CHFR-217ENST00000540537 RNF212Q495C1 297 aa14.8□□□□□ -0.04
CHFR-217ENST00000540537 MRPL53Q96EL3 112 aaKnown RBP14.8□□□□□ -0.04
CHFR-217ENST00000540537 ODF3Q96PU9 254 aa14.8□□□□□ -0.04
CHFR-217ENST00000540537 NPCDR1Q9BY65 106 aa14.8□□□□□ -0.04
CHFR-217ENST00000540537 SLC25A31Q9H0C2 315 aa14.8□□□□□ -0.04
CHFR-217ENST00000540537 FAT2Q9NYQ8 4349 aa14.8□□□□□ -0.04
CHFR-217ENST00000540537 TRBV19A0A075B6N1 114 aa14.79□□□□□ -0.04
CHFR-217ENST00000540537 INMT-MINDY4F8WBC2 141 aa14.79□□□□□ -0.04
CHFR-217ENST00000540537 HTN1P15515 57 aa14.79□□□□□ -0.04
CHFR-217ENST00000540537 CYCSP99999 105 aaKnown RBP14.79□□□□□ -0.04
CHFR-217ENST00000540537 NHLH2Q02577 135 aa14.79□□□□□ -0.04
CHFR-217ENST00000540537 LGALS9BQ3B8N2 356 aa14.79□□□□□ -0.04
CHFR-217ENST00000540537 RNASE8Q8TDE3 154 aaKnown RBP14.79□□□□□ -0.04
CHFR-217ENST00000540537 TMEM263Q8WUH6 116 aaKnown RBP14.79□□□□□ -0.04
CHFR-217ENST00000540537 TIMM8BQ9Y5J9 83 aaPredicted RBP14.79□□□□□ -0.04
CHFR-217ENST00000540537 NPIPB6E9PJ23 425 aa14.78□□□□□ -0.04
CHFR-217ENST00000540537 PDE6HQ13956 83 aa14.78□□□□□ -0.04
CHFR-217ENST00000540537 KIR3DS1Q14943 382 aa14.78□□□□□ -0.04
CHFR-217ENST00000540537 GFI1BQ5VTD9 330 aa14.78□□□□□ -0.04
CHFR-217ENST00000540537 OR5C1Q8NGR4 320 aa14.78□□□□□ -0.04
CHFR-217ENST00000540537 PARD6GQ9BYG4 376 aaPredicted RBP14.78□□□□□ -0.04
CHFR-217ENST00000540537 OR5AC2Q9NZP5 309 aa14.78□□□□□ -0.04
CHFR-217ENST00000540537 NACAE9PAV3 2078 aa14.77□□□□□ -0.04
CHFR-217ENST00000540537 CBY3A6NI87 242 aa14.77□□□□□ -0.05
CHFR-217ENST00000540537 ATP5G1P05496 136 aa14.77□□□□□ -0.05
CHFR-217ENST00000540537 CT45A10P0DMU9 189 aa14.77□□□□□ -0.05
CHFR-217ENST00000540537 HIST1H1EP10412 219 aaKnown RBP14.77□□□□□ -0.05
CHFR-217ENST00000540537 LEPP41159 167 aa14.77□□□□□ -0.05
CHFR-217ENST00000540537 ATP5G3P48201 142 aa14.77□□□□□ -0.05
CHFR-217ENST00000540537 FCN2Q15485 313 aa14.77□□□□□ -0.05
CHFR-217ENST00000540537 F5H768 121 aa14.76□□□□□ -0.05
CHFR-217ENST00000540537 H0YIZ8 118 aa14.76□□□□□ -0.05
CHFR-217ENST00000540537 M0R2N4 97 aa14.76□□□□□ -0.05
CHFR-217ENST00000540537 LRRC37A5PQ49AS3 106 aa14.76□□□□□ -0.05
CHFR-217ENST00000540537 THAP6Q8TBB0 222 aa14.76□□□□□ -0.05
CHFR-217ENST00000540537 MARVELD1Q9BSK0 173 aa14.76□□□□□ -0.05
CHFR-217ENST00000540537 PRELID1Q9Y255 219 aa14.76□□□□□ -0.05
CHFR-217ENST00000540537 NDUFB4O95168 129 aa14.75□□□□□ -0.05
CHFR-217ENST00000540537 PYYP10082 97 aa14.75□□□□□ -0.05
CHFR-217ENST00000540537 GCSAMLQ5JQS6 135 aa14.75□□□□□ -0.05
CHFR-217ENST00000540537 CCDC28AQ8IWP9 274 aa14.75□□□□□ -0.05
CHFR-217ENST00000540537 NOP10Q9NPE3 64 aaKnown RBP14.75□□□□□ -0.05
CHFR-217ENST00000540537 KCNIP2Q9NS61 270 aa14.75□□□□□ -0.05
CHFR-217ENST00000540537 TIMM9Q9Y5J7 89 aa14.75□□□□□ -0.05
CHFR-217ENST00000540537 M0R3E3 92 aa14.74□□□□□ -0.05
CHFR-217ENST00000540537 FAM3BP58499 235 aaPredicted RBP14.74□□□□□ -0.05
CHFR-217ENST00000540537 CLINT1Q14677 625 aa14.74□□□□□ -0.05
CHFR-217ENST00000540537 SLC25A2Q9BXI2 301 aa14.74□□□□□ -0.05
CHFR-217ENST00000540537 HERC2O95714 4834 aa14.74□□□□□ -0.05
CHFR-217ENST00000540537 H2BFSP57053 126 aa14.73□□□□□ -0.05
CHFR-217ENST00000540537 DEFA1P59665 94 aa14.73□□□□□ -0.05
CHFR-217ENST00000540537 DEFA3P59666 94 aa14.73□□□□□ -0.05
CHFR-217ENST00000540537 Q6ZR54 194 aa14.73□□□□□ -0.05
CHFR-217ENST00000540537 FAM167A-AS1Q96KT0 104 aa14.73□□□□□ -0.05
CHFR-217ENST00000540537 WDR61Q9GZS3 305 aaKnown RBP14.73□□□□□ -0.05
CHFR-217ENST00000540537 IGLV2-18A0A075B6J9 118 aa14.72□□□□□ -0.05
CHFR-217ENST00000540537 J3KRW8 73 aa14.72□□□□□ -0.05
CHFR-217ENST00000540537 RTL8CO15255 209 aa14.72□□□□□ -0.05
CHFR-217ENST00000540537 LINC00612Q8N6U2 182 aa14.72□□□□□ -0.05
CHFR-217ENST00000540537 BLNKQ8WV28 456 aa14.72□□□□□ -0.05
CHFR-217ENST00000540537 PPP1R1CQ8WVI7 109 aa14.72□□□□□ -0.05
CHFR-217ENST00000540537 LINC00477Q96M19 166 aa14.72□□□□□ -0.05
CHFR-217ENST00000540537 PYGO2Q9BRQ0 406 aa14.72□□□□□ -0.05
CHFR-217ENST00000540537 MRPL32Q9BYC8 188 aaKnown RBP14.72□□□□□ -0.05
CHFR-217ENST00000540537 TRAV12-3A0A0B4J271 114 aa14.71□□□□□ -0.05
CHFR-217ENST00000540537 SLC25A5P05141 298 aaKnown RBP14.71□□□□□ -0.05
CHFR-217ENST00000540537 MIR17HGQ75NE6 70 aa14.71□□□□□ -0.05
CHFR-217ENST00000540537 AAMDCQ9H7C9 122 aa14.71□□□□□ -0.05
CHFR-217ENST00000540537 PKHD1P08F94 4074 aa14.71□□□□□ -0.05
CHFR-217ENST00000540537 A0A1B0GVY2 172 aa14.7□□□□□ -0.06
CHFR-217ENST00000540537 C17orf112F2Z3M2 114 aa14.7□□□□□ -0.06
CHFR-217ENST00000540537 SSNA1O43805 119 aa14.7□□□□□ -0.06
CHFR-217ENST00000540537 PET100P0DJ07 73 aa14.7□□□□□ -0.06
CHFR-217ENST00000540537 ERCC8Q13216 396 aa14.7□□□□□ -0.06
CHFR-217ENST00000540537 EXOC3-AS1Q8N2X6 119 aa14.7□□□□□ -0.06
CHFR-217ENST00000540537 FAM19A4Q96LR4 140 aa14.7□□□□□ -0.06
CHFR-217ENST00000540537 ATP5SQ99766 215 aa14.7□□□□□ -0.06
CHFR-217ENST00000540537 ATG101Q9BSB4 218 aa14.7□□□□□ -0.06
CHFR-217ENST00000540537 PRSS29PA6NIE9 313 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms