RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 CTRLP40313 264 aa13.11□□□□□ -0.31
COPS3-212ENST00000539941 ATP5G3P48201 142 aa13.11□□□□□ -0.31
COPS3-212ENST00000539941 SCGB2A2Q13296 93 aa13.11□□□□□ -0.31
COPS3-212ENST00000539941 TMEM256Q8N2U0 113 aa13.11□□□□□ -0.31
COPS3-212ENST00000539941 RPUSD4Q96CM3 377 aaKnown RBP13.11□□□□□ -0.31
COPS3-212ENST00000539941 SHANK2-AS3Q9BTD1 123 aa13.11□□□□□ -0.31
COPS3-212ENST00000539941 YAE1D1Q9NRH1 226 aa13.11□□□□□ -0.31
COPS3-212ENST00000539941 TMEM160Q9NX00 188 aa13.11□□□□□ -0.31
COPS3-212ENST00000539941 TMEM14CQ9P0S9 112 aa13.11□□□□□ -0.31
COPS3-212ENST00000539941 RNF24Q9Y225 148 aa13.11□□□□□ -0.31
COPS3-212ENST00000539941 H3BRN7 92 aa13.1□□□□□ -0.31
COPS3-212ENST00000539941 CLEC3BP05452 202 aa13.1□□□□□ -0.31
COPS3-212ENST00000539941 SMIM12Q96EX1 92 aa13.1□□□□□ -0.31
COPS3-212ENST00000539941 CHRDL1Q9BU40 450 aa13.1□□□□□ -0.31
COPS3-212ENST00000539941 A0A0G2JLM5 398 aa13.09□□□□□ -0.31
COPS3-212ENST00000539941 OR10J4P0C629 311 aa13.09□□□□□ -0.31
COPS3-212ENST00000539941 TFPI2P48307 235 aa13.09□□□□□ -0.31
COPS3-212ENST00000539941 COX19Q49B96 90 aa13.09□□□□□ -0.31
COPS3-212ENST00000539941 IL17RELQ6ZVW7 336 aa13.09□□□□□ -0.31
COPS3-212ENST00000539941 FXYD5Q96DB9 178 aa13.09□□□□□ -0.31
COPS3-212ENST00000539941 CRISP2P16562 243 aa13.08□□□□□ -0.31
COPS3-212ENST00000539941 SPATA45Q537H7 98 aa13.08□□□□□ -0.31
COPS3-212ENST00000539941 CLEC19AQ6UXS0 136 aa13.08□□□□□ -0.31
COPS3-212ENST00000539941 Q71RC1 249 aaPredicted RBP13.08□□□□□ -0.31
COPS3-212ENST00000539941 VPS25Q9BRG1 176 aa13.08□□□□□ -0.31
COPS3-212ENST00000539941 BMPR1BO00238 502 aa13.08□□□□□ -0.32
COPS3-212ENST00000539941 LY6G6DO95868 133 aa13.08□□□□□ -0.32
COPS3-212ENST00000539941 IGHG4P01861 327 aa13.08□□□□□ -0.32
COPS3-212ENST00000539941 IGLC2P0DOY2 106 aa13.08□□□□□ -0.32
COPS3-212ENST00000539941 IGLC3P0DOY3 106 aa13.08□□□□□ -0.32
COPS3-212ENST00000539941 PYYP10082 97 aa13.08□□□□□ -0.32
COPS3-212ENST00000539941 GP9P14770 177 aa13.08□□□□□ -0.32
COPS3-212ENST00000539941 Q6ZN92 141 aa13.08□□□□□ -0.32
COPS3-212ENST00000539941 STPG4Q8N801 248 aa13.08□□□□□ -0.32
COPS3-212ENST00000539941 TMEM190Q8WZ59 177 aa13.08□□□□□ -0.32
COPS3-212ENST00000539941 C11orf52Q96A22 123 aa13.08□□□□□ -0.32
COPS3-212ENST00000539941 SAMD10Q9BYL1 202 aa13.08□□□□□ -0.32
COPS3-212ENST00000539941 ZNF702PQ9H963 129 aa13.08□□□□□ -0.32
COPS3-212ENST00000539941 DIRC3C9JPN6 131 aa13.07□□□□□ -0.32
COPS3-212ENST00000539941 PF4V1P10720 104 aa13.07□□□□□ -0.32
COPS3-212ENST00000539941 Q8N2B8 174 aa13.07□□□□□ -0.32
COPS3-212ENST00000539941 RAB9AP51151 201 aa13.06□□□□□ -0.32
COPS3-212ENST00000539941 PMCHL1Q16048 86 aa13.06□□□□□ -0.32
COPS3-212ENST00000539941 BPIFA4PQ86YQ2 179 aa13.06□□□□□ -0.32
COPS3-212ENST00000539941 CSTL1Q9H114 145 aa13.06□□□□□ -0.32
COPS3-212ENST00000539941 RABAC1Q9UI14 185 aa13.06□□□□□ -0.32
COPS3-212ENST00000539941 NSD1Q96L73 2696 aaPredicted RBP13.06□□□□□ -0.32
COPS3-212ENST00000539941 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.05□□□□□ -0.32
COPS3-212ENST00000539941 K7ERU9 68 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 NBEAP1P0C6P0 100 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 HIST1H1EP10412 219 aaKnown RBP13.05□□□□□ -0.32
COPS3-212ENST00000539941 NPPCP23582 126 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 PSMB8P28062 276 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 SLC35B1P78383 322 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 RNF151Q2KHN1 245 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 TMEM95Q3KNT9 176 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 KRTAP21-3Q3LHN1 58 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 BAGE3Q86Y29 109 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 BAGE2Q86Y30 109 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 ZNF414Q96IQ9 312 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 ZFAND3Q9H8U3 227 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 GNB4Q9HAV0 340 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 GGTLC3B5MD39 225 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 ZNF253O75346 499 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 NDUFB4O95168 129 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 MT-ND6P03923 174 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 KLK15Q9H2R5 256 aa13.05□□□□□ -0.32
COPS3-212ENST00000539941 TLN2Q9Y4G6 2542 aa13.04□□□□□ -0.32
COPS3-212ENST00000539941 FN1P02751 2386 aaKnown RBP13.04□□□□□ -0.32
COPS3-212ENST00000539941 ANK3Q12955 4377 aaKnown RBP13.04□□□□□ -0.32
COPS3-212ENST00000539941 SCO2A0A1W2PP80 73 aa13.04□□□□□ -0.32
COPS3-212ENST00000539941 SERF1AO75920 110 aa13.04□□□□□ -0.32
COPS3-212ENST00000539941 OR10J3Q5JRS4 329 aa13.04□□□□□ -0.32
COPS3-212ENST00000539941 OR4F17Q8NGA8 305 aa13.04□□□□□ -0.32
COPS3-212ENST00000539941 CBY3A6NI87 242 aa13.03□□□□□ -0.32
COPS3-212ENST00000539941 NUPR1O60356 82 aa13.03□□□□□ -0.32
COPS3-212ENST00000539941 ARL3P36405 182 aa13.03□□□□□ -0.32
COPS3-212ENST00000539941 MYCNOSP40205 109 aa13.03□□□□□ -0.32
COPS3-212ENST00000539941 MRPS12O15235 138 aaKnown RBP13.02□□□□□ -0.32
COPS3-212ENST00000539941 ELANEP08246 267 aa13.02□□□□□ -0.32
COPS3-212ENST00000539941 FOXE3Q13461 319 aa13.02□□□□□ -0.32
COPS3-212ENST00000539941 TDRG1Q3Y452 100 aa13.02□□□□□ -0.32
COPS3-212ENST00000539941 OCIAD2Q56VL3 154 aa13.02□□□□□ -0.32
COPS3-212ENST00000539941 MXRA5Q9NR99 2828 aa13.02□□□□□ -0.33
COPS3-212ENST00000539941 DNAJC9-AS1A6NH13 148 aa13.02□□□□□ -0.33
COPS3-212ENST00000539941 GPX1P07203 203 aa13.02□□□□□ -0.33
COPS3-212ENST00000539941 RPL7P18124 248 aaKnown RBP13.02□□□□□ -0.33
COPS3-212ENST00000539941 WDR73Q6P4I2 378 aa13.02□□□□□ -0.33
COPS3-212ENST00000539941 ZNF329Q86UD4 541 aa13.02□□□□□ -0.33
COPS3-212ENST00000539941 OR4X2Q8NGF9 303 aa13.02□□□□□ -0.33
COPS3-212ENST00000539941 BLNKQ8WV28 456 aa13.02□□□□□ -0.33
COPS3-212ENST00000539941 SFRP2Q96HF1 295 aa13.02□□□□□ -0.33
COPS3-212ENST00000539941 TMEM238C9JI98 176 aa13.01□□□□□ -0.33
COPS3-212ENST00000539941 NDUFA4O00483 81 aa13.01□□□□□ -0.33
COPS3-212ENST00000539941 TSPOP30536 169 aa13.01□□□□□ -0.33
COPS3-212ENST00000539941 RNF152Q8N8N0 203 aa13.01□□□□□ -0.33
COPS3-212ENST00000539941 NUDT11Q96G61 164 aa13.01□□□□□ -0.33
COPS3-212ENST00000539941 METTL26Q96S19 204 aa13.01□□□□□ -0.33
COPS3-212ENST00000539941 MRPL18Q9H0U6 180 aaKnown RBP13.01□□□□□ -0.33
COPS3-212ENST00000539941 TP53TG3Q9ULZ0 132 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms