RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 GNB1LQ9BYB4 327 aa13.17□□□□□ -0.3
LTBR-207ENST00000539925 TMEM160Q9NX00 188 aa13.17□□□□□ -0.3
LTBR-207ENST00000539925 HELZ2Q9BYK8 2649 aaKnown RBP13.17□□□□□ -0.3
LTBR-207ENST00000539925 NPIPB6E9PJ23 425 aa13.16□□□□□ -0.3
LTBR-207ENST00000539925 M0R3E3 92 aa13.16□□□□□ -0.3
LTBR-207ENST00000539925 CHEK1O14757 476 aa13.16□□□□□ -0.3
LTBR-207ENST00000539925 TRBV12-3P01733 135 aa13.16□□□□□ -0.3
LTBR-207ENST00000539925 TMEM95Q3KNT9 176 aa13.16□□□□□ -0.3
LTBR-207ENST00000539925 LCN12Q6JVE5 192 aa13.16□□□□□ -0.3
LTBR-207ENST00000539925 UBE2E2Q96LR5 201 aa13.16□□□□□ -0.3
LTBR-207ENST00000539925 TRAV8-1A0A0A6YYK1 113 aa13.15□□□□□ -0.3
LTBR-207ENST00000539925 ATP5L2Q7Z4Y8 100 aa13.15□□□□□ -0.3
LTBR-207ENST00000539925 SGK494Q96LW2 274 aa13.15□□□□□ -0.3
LTBR-207ENST00000539925 LGALS1P09382 135 aaKnown RBP13.15□□□□□ -0.31
LTBR-207ENST00000539925 HOXA5P20719 270 aa13.15□□□□□ -0.31
LTBR-207ENST00000539925 FABP9Q0Z7S8 132 aa13.15□□□□□ -0.31
LTBR-207ENST00000539925 IGHV7-4-1A0A0J9YVY3 117 aa13.14□□□□□ -0.31
LTBR-207ENST00000539925 S100A8P05109 93 aa13.14□□□□□ -0.31
LTBR-207ENST00000539925 NDUFA6P56556 154 aa13.14□□□□□ -0.31
LTBR-207ENST00000539925 UNQ9165/PRO28630Q6UXU0 137 aa13.14□□□□□ -0.31
LTBR-207ENST00000539925 C8orf86Q6ZUL3 223 aa13.14□□□□□ -0.31
LTBR-207ENST00000539925 WIPF2Q8TF74 440 aaPredicted RBP13.14□□□□□ -0.31
LTBR-207ENST00000539925 XKRY2A2RUG3 117 aa13.13□□□□□ -0.31
LTBR-207ENST00000539925 ZNF207O43670 478 aaKnown RBP13.13□□□□□ -0.31
LTBR-207ENST00000539925 HLA-DQA1P01909 254 aa13.13□□□□□ -0.31
LTBR-207ENST00000539925 APOHP02749 345 aaPredicted RBP13.13□□□□□ -0.31
LTBR-207ENST00000539925 Q6AWC8 147 aa13.13□□□□□ -0.31
LTBR-207ENST00000539925 YAE1D1Q9NRH1 226 aa13.13□□□□□ -0.31
LTBR-207ENST00000539925 CDX1P47902 265 aaPredicted RBP13.12□□□□□ -0.31
LTBR-207ENST00000539925 COA6Q5JTJ3 125 aaKnown RBP13.12□□□□□ -0.31
LTBR-207ENST00000539925 WFDC12Q8WWY7 111 aa13.12□□□□□ -0.31
LTBR-207ENST00000539925 SMPXQ9UHP9 88 aa13.12□□□□□ -0.31
LTBR-207ENST00000539925 TENM4Q6N022 2769 aa13.12□□□□□ -0.31
LTBR-207ENST00000539925 IGHV3-66A0A0C4DH42 116 aa13.12□□□□□ -0.31
LTBR-207ENST00000539925 LGALS9O00182 355 aa13.12□□□□□ -0.31
LTBR-207ENST00000539925 KRTAP1-1Q07627 177 aa13.12□□□□□ -0.31
LTBR-207ENST00000539925 REC114Q7Z4M0 266 aa13.12□□□□□ -0.31
LTBR-207ENST00000539925 C16orf92Q96LL3 132 aa13.12□□□□□ -0.31
LTBR-207ENST00000539925 PRR25Q96S07 402 aa13.12□□□□□ -0.31
LTBR-207ENST00000539925 NEU1Q99519 415 aa13.12□□□□□ -0.31
LTBR-207ENST00000539925 PPP1R14DQ9NXH3 145 aa13.12□□□□□ -0.31
LTBR-207ENST00000539925 RPLP1P05386 114 aaKnown RBP13.11□□□□□ -0.31
LTBR-207ENST00000539925 FAM162BQ5T6X4 162 aa13.11□□□□□ -0.31
LTBR-207ENST00000539925 RBPMS2Q6ZRY4 209 aaKnown RBP13.11□□□□□ -0.31
LTBR-207ENST00000539925 LCNL1Q6ZST4 164 aa13.11□□□□□ -0.31
LTBR-207ENST00000539925 ZC2HC1AQ96GY0 325 aa13.11□□□□□ -0.31
LTBR-207ENST00000539925 RHPN1-AS1Q9BWJ2 59 aa13.11□□□□□ -0.31
LTBR-207ENST00000539925 IGKV2-40A0A087WW87 121 aaPredicted RBP13.1□□□□□ -0.31
LTBR-207ENST00000539925 HIGD1CA8MV81 97 aa13.1□□□□□ -0.31
LTBR-207ENST00000539925 IGKV2D-40P01614 121 aaPredicted RBP13.1□□□□□ -0.31
LTBR-207ENST00000539925 AKR1D1P51857 326 aa13.1□□□□□ -0.31
LTBR-207ENST00000539925 FOXA3P55318 350 aaPredicted RBP13.1□□□□□ -0.31
LTBR-207ENST00000539925 TCL1AP56279 114 aa13.1□□□□□ -0.31
LTBR-207ENST00000539925 RPS20P60866 119 aaKnown RBP13.1□□□□□ -0.31
LTBR-207ENST00000539925 NUP35Q8NFH5 326 aa13.1□□□□□ -0.31
LTBR-207ENST00000539925 OR2D3Q8NGH3 330 aa13.1□□□□□ -0.31
LTBR-207ENST00000539925 NRN1Q9NPD7 142 aa13.1□□□□□ -0.31
LTBR-207ENST00000539925 LENEPQ9Y5L5 61 aa13.1□□□□□ -0.31
LTBR-207ENST00000539925 CCDC168Q8NDH2 2452 aa13.09□□□□□ -0.31
LTBR-207ENST00000539925 IGHV3OR16-13A0A075B7E8 117 aa13.09□□□□□ -0.31
LTBR-207ENST00000539925 IGHV3-49A0A0A0MS15 119 aa13.09□□□□□ -0.31
LTBR-207ENST00000539925 IGHV3-74A0A0B4J1X5 117 aa13.09□□□□□ -0.31
LTBR-207ENST00000539925 DNAJC9-AS1A6NH13 148 aa13.09□□□□□ -0.31
LTBR-207ENST00000539925 A8MWP6 167 aa13.09□□□□□ -0.31
LTBR-207ENST00000539925 SNURFLB1AK76 121 aa13.09□□□□□ -0.31
LTBR-207ENST00000539925 SRSF2Q01130 221 aaKnown RBP13.09□□□□□ -0.31
LTBR-207ENST00000539925 SMUG1Q53HV7 270 aa13.09□□□□□ -0.31
LTBR-207ENST00000539925 LINC00322Q6ZN03 302 aaPredicted RBP13.09□□□□□ -0.31
LTBR-207ENST00000539925 MRPL18Q9H0U6 180 aaKnown RBP13.09□□□□□ -0.31
LTBR-207ENST00000539925 TRAV8-2A0A0B4J237 113 aa13.08□□□□□ -0.31
LTBR-207ENST00000539925 OVOL1O14753 267 aa13.08□□□□□ -0.31
LTBR-207ENST00000539925 CA1P00915 261 aaPredicted RBP13.08□□□□□ -0.31
LTBR-207ENST00000539925 TMEM78Q5T7P6 136 aa13.08□□□□□ -0.31
LTBR-207ENST00000539925 C9orf47Q6ZRZ4 202 aa13.08□□□□□ -0.31
LTBR-207ENST00000539925 IL17RELQ6ZVW7 336 aa13.08□□□□□ -0.31
LTBR-207ENST00000539925 KLHDC1Q8N7A1 406 aa13.08□□□□□ -0.31
LTBR-207ENST00000539925 ITPR3Q14573 2671 aa13.08□□□□□ -0.32
LTBR-207ENST00000539925 A0A1B0GW15 77 aa13.08□□□□□ -0.32
LTBR-207ENST00000539925 CBLN1P23435 193 aa13.08□□□□□ -0.32
LTBR-207ENST00000539925 TMEM136Q6ZRR5 245 aa13.08□□□□□ -0.32
LTBR-207ENST00000539925 MAP1AP78559 2803 aaPredicted RBP13.08□□□□□ -0.32
LTBR-207ENST00000539925 ID1P41134 155 aa13.07□□□□□ -0.32
LTBR-207ENST00000539925 ASCL2Q99929 193 aa13.07□□□□□ -0.32
LTBR-207ENST00000539925 VGLL1Q99990 258 aa13.07□□□□□ -0.32
LTBR-207ENST00000539925 VPS13CQ709C8 3753 aa13.07□□□□□ -0.32
LTBR-207ENST00000539925 ZNF705FA8MVS1 300 aaPredicted RBP13.06□□□□□ -0.32
LTBR-207ENST00000539925 HLA-DMBP28068 263 aa13.06□□□□□ -0.32
LTBR-207ENST00000539925 S100A2P29034 98 aa13.06□□□□□ -0.32
LTBR-207ENST00000539925 ZNF138P52744 262 aa13.06□□□□□ -0.32
LTBR-207ENST00000539925 HBBP68871 147 aa13.06□□□□□ -0.32
LTBR-207ENST00000539925 TM4SF20Q53R12 229 aa13.06□□□□□ -0.32
LTBR-207ENST00000539925 MRPL54Q6P161 138 aaKnown RBP13.06□□□□□ -0.32
LTBR-207ENST00000539925 ZNF418Q8TF45 676 aaPredicted RBP13.06□□□□□ -0.32
LTBR-207ENST00000539925 UNC79Q9P2D8 2635 aa13.05□□□□□ -0.32
LTBR-207ENST00000539925 FAM181BA6NEQ2 426 aa13.05□□□□□ -0.32
LTBR-207ENST00000539925 M0QZ24 198 aa13.05□□□□□ -0.32
LTBR-207ENST00000539925 SOCS3O14543 225 aa13.05□□□□□ -0.32
LTBR-207ENST00000539925 RAB4BP61018 213 aa13.05□□□□□ -0.32
LTBR-207ENST00000539925 C10orf99Q6UWK7 81 aa13.05□□□□□ -0.32
LTBR-207ENST00000539925 C4orf3Q8WVX3 66 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms