RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 ATRAIDQ6UW56 229 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 GBGT1Q8N5D6 347 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 RNF182Q8N6D2 247 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 C2CD4CQ8TF44 421 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 C11orf52Q96A22 123 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 GRAMD2BQ96HH9 432 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 SGK494Q96LW2 274 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 GPR82Q96P67 336 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 ASCL2Q99929 193 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 CITED1Q99966 193 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 SEC11CQ9BY50 192 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 PARLQ9H300 379 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 ZNF331Q9NQX6 463 aaPredicted RBP6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 EPDR1Q9UM22 224 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 CARHSP1Q9Y2V2 147 aaKnown RBP6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 TRBV20OR9-2A0A075B6H5 130 aa6.89□□□□□ -1.31
RTN4IP1-204ENST00000539449 PGPEP1LA6NFU8 196 aa6.89□□□□□ -1.31
RTN4IP1-204ENST00000539449 TMEM250H0YL14 139 aa6.89□□□□□ -1.31
RTN4IP1-204ENST00000539449 PEX7O00628 323 aa6.89□□□□□ -1.31
RTN4IP1-204ENST00000539449 PDE6DO43924 150 aa6.89□□□□□ -1.31
RTN4IP1-204ENST00000539449 NDUFS6O75380 124 aaKnown RBP6.89□□□□□ -1.31
RTN4IP1-204ENST00000539449 APOC3P02656 99 aa6.89□□□□□ -1.31
RTN4IP1-204ENST00000539449 WFDC3Q8IUB2 231 aa6.89□□□□□ -1.31
RTN4IP1-204ENST00000539449 FAM24BQ8N5W8 94 aa6.89□□□□□ -1.31
RTN4IP1-204ENST00000539449 TXNDC17Q9BRA2 123 aa6.89□□□□□ -1.31
RTN4IP1-204ENST00000539449 RNF24Q9Y225 148 aa6.89□□□□□ -1.31
RTN4IP1-204ENST00000539449 SACSQ9NZJ4 4579 aa6.89□□□□□ -1.31
RTN4IP1-204ENST00000539449 IZUMO1RA6ND01 250 aa6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 ZNF727A8MUV8 499 aa6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 M0QZ24 198 aa6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 ZNF253O75346 499 aa6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 PRB2P02812 416 aaPredicted RBP6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 TCRAP04437 139 aa6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 TFPI2P48307 235 aa6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 RPL11P62913 178 aaKnown RBP6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 PSG9Q00887 426 aa6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 PDE6HQ13956 83 aa6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 DEFB114Q30KQ6 69 aa6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 LYPD1Q8N2G4 141 aa6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 LINC00482Q8N8I6 264 aa6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 C5orf17Q8NAS9 161 aa6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 SMIM7Q9BQ49 75 aa6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 AURKAIP1Q9NWT8 199 aaPredicted RBP6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 PEMTQ9UBM1 199 aa6.88□□□□□ -1.31
RTN4IP1-204ENST00000539449 IGKV2-40A0A087WW87 121 aaPredicted RBP6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 TRAV8-1A0A0A6YYK1 113 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 HELTA6NFD8 242 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 DIRC3C9JPN6 131 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 ISLRO14498 428 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 SCO1O75880 301 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 IGKV2D-40P01614 121 aaPredicted RBP6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 IGLV2-11P01706 119 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 IGLV2-8P01709 118 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 AKR1C3P42330 323 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 RPL35P42766 123 aaKnown RBP6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 PSG3Q16557 428 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 BEAN1Q3B7T3 259 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 LCN12Q6JVE5 192 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 GOLT1AQ6ZVE7 132 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 DCANP1Q8TF63 244 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 C16orf92Q96LL3 132 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 VGLL1Q99990 258 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 NKX6-2Q9C056 277 aaPredicted RBP6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 MS4A6AQ9H2W1 248 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 SDF2L1Q9HCN8 221 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 NRN1Q9NPD7 142 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 PCLOQ9Y6V0 5065 aa6.87□□□□□ -1.31
RTN4IP1-204ENST00000539449 SORL1Q92673 2214 aa6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 K7EQG2 157 aa6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 ZNF705DP0CH99 300 aaPredicted RBP6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 ZNF705BP0CI00 300 aaPredicted RBP6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 RPL23P62829 140 aaKnown RBP6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 ERCC8Q13216 396 aa6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 CD300EQ496F6 205 aaPredicted RBP6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 TMEM61Q8N0U2 210 aa6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 NHLRC2Q8NBF2 726 aa6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 CLRN3Q8NCR9 226 aa6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 OCC1Q8TAD7 63 aa6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 MRAPQ8TCY5 172 aa6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 HIST1H2BAQ96A08 127 aa6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 IGF2BP2-AS1Q96M15 143 aa6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 SLC50A1Q9BRV3 221 aa6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 ATG101Q9BSB4 218 aa6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 AAMDCQ9H7C9 122 aa6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 KLF12Q9Y4X4 402 aa6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 DNAH3Q8TD57 4116 aa6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 AGRNO00468 2067 aa6.86□□□□□ -1.31
RTN4IP1-204ENST00000539449 DNAH9Q9NYC9 4486 aa6.85□□□□□ -1.31
RTN4IP1-204ENST00000539449 F6UB75 175 aa6.85□□□□□ -1.31
RTN4IP1-204ENST00000539449 K7EN84 100 aa6.85□□□□□ -1.31
RTN4IP1-204ENST00000539449 PF4P02776 101 aa6.85□□□□□ -1.31
RTN4IP1-204ENST00000539449 BMI1P35226 326 aa6.85□□□□□ -1.31
RTN4IP1-204ENST00000539449 CNN1P51911 297 aaKnown RBP6.85□□□□□ -1.31
RTN4IP1-204ENST00000539449 TMEM183BQ1AE95 376 aa6.85□□□□□ -1.31
RTN4IP1-204ENST00000539449 TMEM241Q24JQ0 296 aa6.85□□□□□ -1.31
RTN4IP1-204ENST00000539449 CENPWQ5EE01 88 aa6.85□□□□□ -1.31
RTN4IP1-204ENST00000539449 CMTM2Q8TAZ6 248 aa6.85□□□□□ -1.31
RTN4IP1-204ENST00000539449 DYNLRB2Q8TF09 96 aa6.85□□□□□ -1.31
RTN4IP1-204ENST00000539449 TVP23CQ96ET8 276 aa6.85□□□□□ -1.31
RTN4IP1-204ENST00000539449 NAT8Q9UHE5 227 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms