RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 FP248Q71RG6 208 aaPredicted RBP1.41□□□□□ -2.18
SNHG1-210ENST00000539303 COA5Q86WW8 74 aa1.41□□□□□ -2.18
SNHG1-210ENST00000539303 RPS19BP1Q86WX3 136 aaKnown RBP1.41□□□□□ -2.18
SNHG1-210ENST00000539303 MED12LQ86YW9 2145 aa1.41□□□□□ -2.18
SNHG1-210ENST00000539303 RNASE11Q8TAA1 199 aaKnown RBP1.41□□□□□ -2.18
SNHG1-210ENST00000539303 OR4C12Q96R67 309 aa1.41□□□□□ -2.18
SNHG1-210ENST00000539303 GGACTQ9BVM4 153 aa1.41□□□□□ -2.18
SNHG1-210ENST00000539303 TCOF1Q13428 1488 aaKnown RBP1.41□□□□□ -2.18
SNHG1-210ENST00000539303 SCN3AQ9NY46 2000 aa1.4□□□□□ -2.18
SNHG1-210ENST00000539303 MDC1Q14676 2089 aaKnown RBP1.4□□□□□ -2.19
SNHG1-210ENST00000539303 MGAMO43451 1857 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 FRMPD1Q5SYB0 1578 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 TRAV10A0A0B4J240 114 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 E7EUB6 86 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 K7ERU9 68 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 TRACP01848 142 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 GPX1P07203 203 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 BLCAPP62952 87 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 GLYATL3Q5SZD4 288 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 HAGHLQ6PII5 290 aaPredicted RBP1.4□□□□□ -2.19
SNHG1-210ENST00000539303 C2orf82Q6UX34 121 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 MMGT1Q8N4V1 131 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 CLEC2BQ92478 149 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 TP53RKQ96S44 253 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 DIDO1Q9BTC0 2240 aaKnown RBP1.4□□□□□ -2.19
SNHG1-210ENST00000539303 MYLKQ15746 1914 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 DISP1Q96F81 1524 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 NISCHQ9Y2I1 1504 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 FAM135BQ49AJ0 1406 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 POLEQ07864 2286 aa1.4□□□□□ -2.19
SNHG1-210ENST00000539303 CEP192Q8TEP8 1941 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 TRAV27A0A087WT01 109 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 LOC107986453A0A1B0GWG9 222 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 C5orf67F2Z3F1 127 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 SULT1C4O75897 302 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 ERC2-IT1O76042 136 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 SAA1P0DJI8 122 aaPredicted RBP1.39□□□□□ -2.19
SNHG1-210ENST00000539303 SLC25A4P12235 298 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 ZNF93P35789 620 aaPredicted RBP1.39□□□□□ -2.19
SNHG1-210ENST00000539303 PDE6HQ13956 83 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 ARPINQ7Z6K5 226 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 OR5AK2Q8NH90 309 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 CCL4L1Q8NHW4 92 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 Q96M85 177 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 CST11Q9H112 138 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 TNFSF18Q9UNG2 199 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 KIAA1549Q9HCM3 1950 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 GBF1Q92538 1859 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 OVOS2A0A0J9YW53 1432 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 OVOS2Q6IE36 1432 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 KIAA1107Q9UPP5 1409 aa1.39□□□□□ -2.19
SNHG1-210ENST00000539303 MYH1P12882 1939 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 BICRAQ9NZM4 1560 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 BAZ2BQ9UIF8 2168 aaKnown RBP1.38□□□□□ -2.19
SNHG1-210ENST00000539303 A0A096LPI6 279 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 LOC107984156A0A0G2JMH3 177 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 CCDC160A6NGH7 325 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 ZNF727A8MUV8 499 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 F8W036 122 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 IGLC6P0CF74 106 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 LINC00694P0DN24 101 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 HLA-DRB4P13762 266 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 HIST1H1BP16401 226 aaKnown RBP1.38□□□□□ -2.19
SNHG1-210ENST00000539303 KDELR1P24390 212 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 AKR1D1P51857 326 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 PCBD1P61457 104 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 NCS1P62166 190 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 SNRPD3P62318 126 aaKnown RBP1.38□□□□□ -2.19
SNHG1-210ENST00000539303 QRFPP83859 136 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 DIAPH2-AS1Q14236 149 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 C1orf137Q5JT78 98 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 TEX261Q6UWH6 196 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 GLIPR1L1Q6UWM5 242 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 GKN2Q86XP6 184 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 ARL17AQ8IVW1 177 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 CTAGE3PQ8IX95 158 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 C4orf3Q8WVX3 66 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 ZCCHC13Q8WW36 166 aaKnown RBP1.38□□□□□ -2.19
SNHG1-210ENST00000539303 NABP2Q9BQ15 211 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 LPAR5Q9H1C0 372 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 HLA-DRB4X5D2U9 266 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 STRCP1A6NGW2 1772 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 DISP2A7MBM2 1401 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 FREM1Q5H8C1 2179 aa1.38□□□□□ -2.19
SNHG1-210ENST00000539303 FN1P02751 2386 aaKnown RBP1.37□□□□□ -2.19
SNHG1-210ENST00000539303 ICE1Q9Y2F5 2266 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 A0A087WSZ3 146 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 TRBV6-8A0A0A6YYG3 113 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 TRBV6-5A0A0K0K1A5 114 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 C3orf85A0A1B0GTC6 90 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 C9orf170A2RU37 121 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 K7EP13 123 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 CXCL8P10145 99 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 DNAJB13P59910 316 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 KRTAP12-3P60328 96 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 COPZ1P61923 177 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 RPS25P62851 125 aaKnown RBP1.37□□□□□ -2.19
SNHG1-210ENST00000539303 RPL13AP3Q6NVV1 102 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 TMEM91Q6ZNR0 172 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 Q6ZRN7 208 aaPredicted RBP1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms