RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 LCN12Q6JVE5 192 aa11.44□□□□□ -0.58
CDCA3-207ENST00000538862 C1orf122Q6ZSJ8 110 aa11.44□□□□□ -0.58
CDCA3-207ENST00000538862 RNF125Q96EQ8 232 aa11.44□□□□□ -0.58
CDCA3-207ENST00000538862 TIMD4Q96H15 378 aa11.44□□□□□ -0.58
CDCA3-207ENST00000538862 LPAR2Q9HBW0 351 aa11.44□□□□□ -0.58
CDCA3-207ENST00000538862 LOC102724200A0A096LPH7 203 aaPredicted RBP11.43□□□□□ -0.58
CDCA3-207ENST00000538862 CHEK1O14757 476 aa11.43□□□□□ -0.58
CDCA3-207ENST00000538862 MRPS12O15235 138 aaKnown RBP11.43□□□□□ -0.58
CDCA3-207ENST00000538862 CRXO43186 299 aaPredicted RBP11.43□□□□□ -0.58
CDCA3-207ENST00000538862 HNRNPA3P51991 378 aaKnown RBP11.43□□□□□ -0.58
CDCA3-207ENST00000538862 SIGLEC15Q6ZMC9 328 aa11.43□□□□□ -0.58
CDCA3-207ENST00000538862 Q6ZN92 141 aa11.43□□□□□ -0.58
CDCA3-207ENST00000538862 TMEM70Q9BUB7 260 aa11.43□□□□□ -0.58
CDCA3-207ENST00000538862 ODF3BA8MYP8 253 aa11.43□□□□□ -0.58
CDCA3-207ENST00000538862 HLA-DRB1P01911 266 aa11.43□□□□□ -0.58
CDCA3-207ENST00000538862 ARF6P62330 175 aa11.43□□□□□ -0.58
CDCA3-207ENST00000538862 Q56UQ5 140 aa11.43□□□□□ -0.58
CDCA3-207ENST00000538862 GATD1Q8NB37 220 aa11.43□□□□□ -0.58
CDCA3-207ENST00000538862 WFDC11Q8NEX6 87 aa11.43□□□□□ -0.58
CDCA3-207ENST00000538862 ZNF48Q96MX3 618 aaPredicted RBP11.43□□□□□ -0.58
CDCA3-207ENST00000538862 MRPS16Q9Y3D3 137 aaKnown RBP11.43□□□□□ -0.58
CDCA3-207ENST00000538862 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.42□□□□□ -0.58
CDCA3-207ENST00000538862 NPIPB5A8MRT5 1133 aa11.42□□□□□ -0.58
CDCA3-207ENST00000538862 IL4P05112 153 aa11.42□□□□□ -0.58
CDCA3-207ENST00000538862 PRTN3P24158 256 aa11.42□□□□□ -0.58
CDCA3-207ENST00000538862 PDE6HQ13956 83 aa11.42□□□□□ -0.58
CDCA3-207ENST00000538862 BATFQ16520 125 aa11.42□□□□□ -0.58
CDCA3-207ENST00000538862 PSG3Q16557 428 aa11.42□□□□□ -0.58
CDCA3-207ENST00000538862 FAM120AOSQ5T036 256 aa11.42□□□□□ -0.58
CDCA3-207ENST00000538862 ZNF414Q96IQ9 312 aa11.42□□□□□ -0.58
CDCA3-207ENST00000538862 C17orf77Q96MU5 243 aa11.42□□□□□ -0.58
CDCA3-207ENST00000538862 CSTL1Q9H114 145 aa11.42□□□□□ -0.58
CDCA3-207ENST00000538862 BEX4Q9NWD9 120 aaPredicted RBP11.42□□□□□ -0.58
CDCA3-207ENST00000538862 HILPDAQ9Y5L2 63 aa11.42□□□□□ -0.58
CDCA3-207ENST00000538862 A0A1B0GW15 77 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 ZNF785A8K8V0 405 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 OVOL3O00110 214 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 OR5AL1P0C617 328 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 RIGQ13278 110 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 C5orf64Q2M2E5 130 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 KRTAP1-3Q8IUG1 177 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 ATOH7Q8N100 152 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 ZC2HC1AQ96GY0 325 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 PSG8Q9UQ74 426 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 LAMTOR2Q9Y2Q5 125 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 IGLV11-55A0A075B6I3 123 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 LOC105371242A0A075B767 164 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 IGHV1-24A0A0C4DH33 117 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 A0A1B0GUT8 65 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 GNG7O60262 68 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 MFAP4P55083 255 aa11.41□□□□□ -0.58
CDCA3-207ENST00000538862 NEU4Q8WWR8 484 aaPredicted RBP11.41□□□□□ -0.58
CDCA3-207ENST00000538862 SH2D7A6NKC9 451 aaPredicted RBP11.4□□□□□ -0.58
CDCA3-207ENST00000538862 TOX4O94842 621 aa11.4□□□□□ -0.58
CDCA3-207ENST00000538862 LEPROTL1O95214 131 aa11.4□□□□□ -0.58
CDCA3-207ENST00000538862 TSPOP30536 169 aa11.4□□□□□ -0.58
CDCA3-207ENST00000538862 FCGR2BP31994 310 aaPredicted RBP11.4□□□□□ -0.58
CDCA3-207ENST00000538862 Q6AWC8 147 aa11.4□□□□□ -0.58
CDCA3-207ENST00000538862 ZNF562Q6V9R5 426 aa11.4□□□□□ -0.58
CDCA3-207ENST00000538862 IGFBPL1Q8WX77 278 aa11.4□□□□□ -0.58
CDCA3-207ENST00000538862 FANCD2OSQ96PS1 177 aa11.4□□□□□ -0.58
CDCA3-207ENST00000538862 SERTM2A0A1B0GWG4 89 aa11.39□□□□□ -0.59
CDCA3-207ENST00000538862 CD24P25063 80 aa11.39□□□□□ -0.59
CDCA3-207ENST00000538862 CCDC144NLQ6NUI1 221 aa11.39□□□□□ -0.59
CDCA3-207ENST00000538862 TTC9CQ8N5M4 171 aa11.39□□□□□ -0.59
CDCA3-207ENST00000538862 KIR3DL3Q8N743 410 aa11.39□□□□□ -0.59
CDCA3-207ENST00000538862 CLEC5AQ9NY25 188 aa11.39□□□□□ -0.59
CDCA3-207ENST00000538862 SYS1-DBNDD2H3BUS1 97 aa11.39□□□□□ -0.59
CDCA3-207ENST00000538862 IGLL1P15814 213 aa11.39□□□□□ -0.59
CDCA3-207ENST00000538862 HES1Q14469 280 aa11.39□□□□□ -0.59
CDCA3-207ENST00000538862 Q5PR19 223 aa11.39□□□□□ -0.59
CDCA3-207ENST00000538862 CLUHP3Q96NS8 147 aa11.39□□□□□ -0.59
CDCA3-207ENST00000538862 AAMDCQ9H7C9 122 aa11.39□□□□□ -0.59
CDCA3-207ENST00000538862 OOSP1A8MZH6 123 aa11.38□□□□□ -0.59
CDCA3-207ENST00000538862 KLRD1Q13241 179 aa11.38□□□□□ -0.59
CDCA3-207ENST00000538862 KLF17Q5JT82 389 aaPredicted RBP11.38□□□□□ -0.59
CDCA3-207ENST00000538862 PRR31Q5SQ13 230 aa11.38□□□□□ -0.59
CDCA3-207ENST00000538862 C11orf71Q6IPW1 123 aa11.38□□□□□ -0.59
CDCA3-207ENST00000538862 ARPC1AQ92747 370 aa11.38□□□□□ -0.59
CDCA3-207ENST00000538862 ZANQ9Y493 2812 aa11.38□□□□□ -0.59
CDCA3-207ENST00000538862 SETD2Q9BYW2 2564 aaPredicted RBP11.37□□□□□ -0.59
CDCA3-207ENST00000538862 M0QZ24 198 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 LY6HO94772 140 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 CRIP1P50238 77 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 PSG9Q00887 426 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 PRSS57Q6UWY2 283 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 Q71RC1 249 aaPredicted RBP11.37□□□□□ -0.59
CDCA3-207ENST00000538862 SPATA12Q7Z6I5 190 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 ORAOV1Q8WV07 137 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 THYN1Q9P016 225 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 ZFHX3Q15911 3703 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 OR4C46A6NHA9 309 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 ARMS2P0C7Q2 107 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 CSN1S1P47710 185 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 EBI3Q14213 229 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 Q8N6K4 173 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 STPG4Q8N801 248 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 TMUB1Q9BVT8 246 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 ST20Q9HBF5 79 aa11.37□□□□□ -0.59
CDCA3-207ENST00000538862 TLN2Q9Y4G6 2542 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms