RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 C6orf226Q5I0X4 101 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 KCNRGQ8N5I3 272 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 OR51G1Q8NGK1 321 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 SPAG8Q99932 426 aaPredicted RBP2.79□□□□□ -1.96
PTPN22-211ENST00000538253 MRPL32Q9BYC8 188 aaKnown RBP2.79□□□□□ -1.96
PTPN22-211ENST00000538253 ZNF581Q9P0T4 197 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 CR1P17927 2039 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 LOC107984640A0A0U1RRK4 108 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 TEX48A0A1B0GUV7 120 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 TMEM189A5PLL7 270 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 CCDC179H3BU77 68 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 DUSP14O95147 198 aaKnown RBP2.78□□□□□ -1.96
PTPN22-211ENST00000538253 PTHLHP12272 177 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 CAMPP49913 170 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 H2BFSP57053 126 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 SNRPD3P62318 126 aaKnown RBP2.78□□□□□ -1.96
PTPN22-211ENST00000538253 UFSP1Q6NVU6 142 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 TEPPQ6URK8 271 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 ZNF502Q8TBZ5 544 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 DUX3Q96PT4 197 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 PARP12Q9H0J9 701 aaKnown RBP2.78□□□□□ -1.96
PTPN22-211ENST00000538253 MRPS16Q9Y3D3 137 aaKnown RBP2.78□□□□□ -1.96
PTPN22-211ENST00000538253 TIMM9Q9Y5J7 89 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 VCANP13611 3396 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 TRAV8-6A0A0B4J262 113 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 GAGE10A6NGK3 116 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 M0R2Z0 102 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 HYPMO75409 117 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 P0C879 139 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 RNASE2P10153 161 aaKnown RBP2.78□□□□□ -1.96
PTPN22-211ENST00000538253 ACOT6Q3I5F7 207 aaPredicted RBP2.78□□□□□ -1.96
PTPN22-211ENST00000538253 SPANXN5Q5MJ07 72 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 PRIMA1Q86XR5 153 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 ZC2HC1AQ96GY0 325 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 LINC00477Q96M19 166 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 SLC50A1Q9BRV3 221 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 MAP1LC3AQ9H492 121 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 FUT9Q9Y231 359 aa2.78□□□□□ -1.96
PTPN22-211ENST00000538253 LSM5Q9Y4Y9 91 aaKnown RBP2.78□□□□□ -1.96
PTPN22-211ENST00000538253 TRAV14DV4A0A0A6YYC5 116 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 TEX22C9J3V5 150 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 COX7A2P2O60397 106 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 PITX3O75364 302 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 JTBO76095 146 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 IGKV1-5P01602 117 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 IGLC2P0DOY2 106 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 IGLC3P0DOY3 106 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 PI3P19957 117 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 CD24P25063 80 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 CSN1S1P47710 185 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 APOC4P55056 127 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 TCTAP57738 103 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 SUPT4H1P63272 117 aaKnown RBP2.77□□□□□ -1.97
PTPN22-211ENST00000538253 SLC38A11Q08AI6 406 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 SP6Q3SY56 376 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 ANXA2RQ3ZCQ2 193 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 C19orf54Q5BKX5 351 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 ACTL10Q5JWF8 245 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 BTNL8Q6UX41 500 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 LYZL2Q7Z4W2 148 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 WIPF2Q8TF74 440 aaPredicted RBP2.77□□□□□ -1.97
PTPN22-211ENST00000538253 MS4A10Q96PG2 267 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 NAT8BQ9UHF3 227 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 PXMP4Q9Y6I8 212 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 WNK2Q9Y3S1 2297 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 CSPG4Q6UVK1 2322 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 EYSQ5T1H1 3165 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 UMAD1C9J7I0 102 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 CD28P10747 220 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 RPL35AP18077 110 aaKnown RBP2.77□□□□□ -1.97
PTPN22-211ENST00000538253 TSPOP30536 169 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 CTRLP40313 264 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 GNG4P50150 75 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 GNG5P63218 68 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 RPL24P83731 157 aaKnown RBP2.77□□□□□ -1.97
PTPN22-211ENST00000538253 SERF2P84101 59 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 HOXA4Q00056 320 aaPredicted RBP2.77□□□□□ -1.97
PTPN22-211ENST00000538253 FHL3Q13643 280 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 DIAPH2-AS1Q14236 149 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 C4orf26Q17RF5 130 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 OR10J3Q5JRS4 329 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 MORN3Q6PF18 240 aaPredicted RBP2.77□□□□□ -1.97
PTPN22-211ENST00000538253 ADAMTSL5Q6ZMM2 481 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 WFDC3Q8IUB2 231 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 LINC00482Q8N8I6 264 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 THAP8Q8NA92 274 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 HSPB9Q9BQS6 159 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 HIGD1AQ9Y241 93 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 SELENOKQ9Y6D0 94 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 SRRM4A7MD48 611 aaKnown RBP2.77□□□□□ -1.97
PTPN22-211ENST00000538253 SSSCA1O60232 199 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 PROP1O75360 226 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 IGLV2-14P01704 120 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 HBE1P02100 147 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 AMY1AP04745 511 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 SPINK8P0C7L1 97 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 HOXD3P31249 432 aaPredicted RBP2.77□□□□□ -1.97
PTPN22-211ENST00000538253 RND2P52198 227 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 ZNF415Q09FC8 603 aa2.77□□□□□ -1.97
PTPN22-211ENST00000538253 ZNF345Q14585 488 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms