RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 C1QTNF4Q9BXJ3 329 aa6□□□□□ -1.45
SPARC-208ENST00000538026 TMEM14CQ9P0S9 112 aa6□□□□□ -1.45
SPARC-208ENST00000538026 IGHV3OR16-12A0A075B7B8 117 aa5.99□□□□□ -1.45
SPARC-208ENST00000538026 ZNF705GA8MUZ8 300 aaPredicted RBP5.99□□□□□ -1.45
SPARC-208ENST00000538026 DUSP14O95147 198 aaKnown RBP5.99□□□□□ -1.45
SPARC-208ENST00000538026 HIST1H1EP10412 219 aaKnown RBP5.99□□□□□ -1.45
SPARC-208ENST00000538026 S100A7P31151 101 aa5.99□□□□□ -1.45
SPARC-208ENST00000538026 NUTF2P61970 127 aaKnown RBP5.99□□□□□ -1.45
SPARC-208ENST00000538026 HIST1H1AQ02539 215 aaPredicted RBP5.99□□□□□ -1.45
SPARC-208ENST00000538026 EXOC3-AS1Q8N2X6 119 aa5.99□□□□□ -1.45
SPARC-208ENST00000538026 LINC00476Q8WZB0 136 aa5.99□□□□□ -1.45
SPARC-208ENST00000538026 PFDN5Q99471 154 aa5.99□□□□□ -1.45
SPARC-208ENST00000538026 MED28Q9H204 178 aa5.99□□□□□ -1.45
SPARC-208ENST00000538026 APOBP04114 4563 aaKnown RBP5.98□□□□□ -1.45
SPARC-208ENST00000538026 RNF222A6NCQ9 220 aa5.98□□□□□ -1.45
SPARC-208ENST00000538026 NUPR2A6NF83 97 aa5.98□□□□□ -1.45
SPARC-208ENST00000538026 BOLA2-SMG1P6H3BVE0 249 aa5.98□□□□□ -1.45
SPARC-208ENST00000538026 ZNF253O75346 499 aa5.98□□□□□ -1.45
SPARC-208ENST00000538026 EMP1P54849 157 aa5.98□□□□□ -1.45
SPARC-208ENST00000538026 ERCC8Q13216 396 aa5.98□□□□□ -1.45
SPARC-208ENST00000538026 FFAR4Q5NUL3 377 aa5.98□□□□□ -1.45
SPARC-208ENST00000538026 Q6ZQT7 251 aa5.98□□□□□ -1.45
SPARC-208ENST00000538026 S100A7AQ86SG5 101 aa5.98□□□□□ -1.45
SPARC-208ENST00000538026 FAM19A4Q96LR4 140 aa5.98□□□□□ -1.45
SPARC-208ENST00000538026 AQP10Q96PS8 301 aa5.98□□□□□ -1.45
SPARC-208ENST00000538026 SLC50A1Q9BRV3 221 aa5.98□□□□□ -1.45
SPARC-208ENST00000538026 DKK2Q9UBU2 259 aa5.98□□□□□ -1.45
SPARC-208ENST00000538026 APLNQ9ULZ1 77 aa5.98□□□□□ -1.45
SPARC-208ENST00000538026 HERC2O95714 4834 aa5.98□□□□□ -1.45
SPARC-208ENST00000538026 KIAA1109Q2LD37 5005 aa5.98□□□□□ -1.45
SPARC-208ENST00000538026 DNAH8Q96JB1 4490 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 SMIM9A6NGZ8 99 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 NPIPB6E9PJ23 425 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 GIPP09681 153 aaPredicted RBP5.97□□□□□ -1.45
SPARC-208ENST00000538026 NBEAP1P0C6P0 100 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 GUK1Q16774 197 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 RGS21Q2M5E4 152 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 FAM222AQ5U5X8 452 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 GFI1BQ5VTD9 330 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 RPP25LQ8N5L8 163 aaKnown RBP5.97□□□□□ -1.45
SPARC-208ENST00000538026 LRRC20Q8TCA0 184 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 BLNKQ8WV28 456 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 RNF141Q8WVD5 230 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 PHYHIPLQ96FC7 376 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 VGLL1Q99990 258 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 AGPAT4-IT1Q9H0P7 198 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 RNF24Q9Y225 148 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 FUT9Q9Y231 359 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 MUC4Q99102 2169 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 HSPG2P98160 4391 aa5.97□□□□□ -1.45
SPARC-208ENST00000538026 NACAE9PAV3 2078 aa5.96□□□□□ -1.46
SPARC-208ENST00000538026 LOC102723971A0A1B0GUV8 181 aa5.96□□□□□ -1.46
SPARC-208ENST00000538026 SMLR1H3BR10 107 aa5.96□□□□□ -1.46
SPARC-208ENST00000538026 OR10J4P0C629 311 aa5.96□□□□□ -1.46
SPARC-208ENST00000538026 PET100P0DJ07 73 aa5.96□□□□□ -1.46
SPARC-208ENST00000538026 RAB2AP61019 212 aa5.96□□□□□ -1.46
SPARC-208ENST00000538026 RHOBP62745 196 aa5.96□□□□□ -1.46
SPARC-208ENST00000538026 PDE6HQ13956 83 aa5.96□□□□□ -1.46
SPARC-208ENST00000538026 ICAM4Q14773 271 aa5.96□□□□□ -1.46
SPARC-208ENST00000538026 PRR9Q5T870 116 aa5.96□□□□□ -1.46
SPARC-208ENST00000538026 MRPL53Q96EL3 112 aaKnown RBP5.96□□□□□ -1.46
SPARC-208ENST00000538026 PAXXQ9BUH6 204 aa5.96□□□□□ -1.46
SPARC-208ENST00000538026 OR51M1Q9H341 326 aa5.96□□□□□ -1.46
SPARC-208ENST00000538026 KLK5Q9Y337 293 aaPredicted RBP5.96□□□□□ -1.46
SPARC-208ENST00000538026 GOLT1BQ9Y3E0 138 aa5.96□□□□□ -1.46
SPARC-208ENST00000538026 YTHDF2Q9Y5A9 579 aaKnown RBP5.96□□□□□ -1.46
SPARC-208ENST00000538026 IGKV2-40A0A087WW87 121 aaPredicted RBP5.95□□□□□ -1.46
SPARC-208ENST00000538026 IGLL5B9A064 214 aa5.95□□□□□ -1.46
SPARC-208ENST00000538026 ZNF324O75467 553 aaPredicted RBP5.95□□□□□ -1.46
SPARC-208ENST00000538026 INSP01308 110 aa5.95□□□□□ -1.46
SPARC-208ENST00000538026 IGKV2D-40P01614 121 aaPredicted RBP5.95□□□□□ -1.46
SPARC-208ENST00000538026 HBE1P02100 147 aa5.95□□□□□ -1.46
SPARC-208ENST00000538026 AMBPP02760 352 aa5.95□□□□□ -1.46
SPARC-208ENST00000538026 ATP6V0CP27449 155 aa5.95□□□□□ -1.46
SPARC-208ENST00000538026 CDKN1BP46527 198 aa5.95□□□□□ -1.46
SPARC-208ENST00000538026 CD300CQ08708 224 aa5.95□□□□□ -1.46
SPARC-208ENST00000538026 RPL7L1Q6DKI1 246 aaKnown RBP5.95□□□□□ -1.46
SPARC-208ENST00000538026 C9orf47Q6ZRZ4 202 aa5.95□□□□□ -1.46
SPARC-208ENST00000538026 SSX7Q7RTT5 188 aa5.95□□□□□ -1.46
SPARC-208ENST00000538026 C2CD4CQ8TF44 421 aa5.95□□□□□ -1.46
SPARC-208ENST00000538026 MRPL32Q9BYC8 188 aaKnown RBP5.95□□□□□ -1.46
SPARC-208ENST00000538026 SH3BGRL3Q9H299 93 aa5.95□□□□□ -1.46
SPARC-208ENST00000538026 CYTL1Q9NRR1 136 aa5.95□□□□□ -1.46
SPARC-208ENST00000538026 TNFSF18Q9UNG2 199 aa5.95□□□□□ -1.46
SPARC-208ENST00000538026 RYR1P21817 5038 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 DEFB131BA0A096LNP1 70 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 TRAV10A0A0B4J240 114 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 KLLNB2CW77 178 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 C11orf94C9JXX5 98 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 C17orf112F2Z3M2 114 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 J3KRW8 73 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 HMGB3O15347 200 aaKnown RBP5.94□□□□□ -1.46
SPARC-208ENST00000538026 JTBO76095 146 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 LY6G6CO95867 125 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 IFNA5P01569 189 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 SPART-AS1P0CW21 52 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 M6PRP20645 277 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 TSPOP30536 169 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 TAS2R60P59551 318 aa5.94□□□□□ -1.46
SPARC-208ENST00000538026 RANP62826 216 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms