RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 ENY2Q9NPA8 101 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 GNG12Q9UBI6 72 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 KLF12Q9Y4X4 402 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 SOX21Q9Y651 276 aaPredicted RBP8.47□□□□□ -1.05
RTN3-208ENST00000537981 DMXL1Q9Y485 3027 aa8.46□□□□□ -1.05
RTN3-208ENST00000537981 IGHV1OR21-1A0A087WYE8 117 aa8.46□□□□□ -1.05
RTN3-208ENST00000537981 ORM2P19652 201 aa8.46□□□□□ -1.05
RTN3-208ENST00000537981 PDPNQ86YL7 162 aa8.46□□□□□ -1.05
RTN3-208ENST00000537981 S1PR3Q99500 378 aa8.46□□□□□ -1.05
RTN3-208ENST00000537981 HIST1H4GQ99525 98 aa8.46□□□□□ -1.05
RTN3-208ENST00000537981 TNFRSF4P43489 277 aa8.46□□□□□ -1.06
RTN3-208ENST00000537981 EXOC3-AS1Q8N2X6 119 aa8.46□□□□□ -1.06
RTN3-208ENST00000537981 IFI27L2Q9H2X8 130 aa8.46□□□□□ -1.06
RTN3-208ENST00000537981 ZNF492Q9P255 531 aa8.46□□□□□ -1.06
RTN3-208ENST00000537981 CTSZQ9UBR2 303 aa8.46□□□□□ -1.06
RTN3-208ENST00000537981 TRAV40A0A0B4J280 105 aa8.45□□□□□ -1.06
RTN3-208ENST00000537981 LOC107984156A0A0G2JMH3 177 aa8.45□□□□□ -1.06
RTN3-208ENST00000537981 IGKV1-16P04430 117 aa8.45□□□□□ -1.06
RTN3-208ENST00000537981 ARL17AQ8IVW1 177 aa8.45□□□□□ -1.06
RTN3-208ENST00000537981 NPIPB3Q92617 1050 aa8.45□□□□□ -1.06
RTN3-208ENST00000537981 RITA1Q96K30 269 aa8.45□□□□□ -1.06
RTN3-208ENST00000537981 GFRA4Q9GZZ7 299 aa8.45□□□□□ -1.06
RTN3-208ENST00000537981 IGKV1D-37A0A075B6S9 117 aa8.45□□□□□ -1.06
RTN3-208ENST00000537981 TMEM8BA6NDV4 472 aa8.45□□□□□ -1.06
RTN3-208ENST00000537981 IGLV2-11P01706 119 aa8.45□□□□□ -1.06
RTN3-208ENST00000537981 TCRAP04437 139 aa8.45□□□□□ -1.06
RTN3-208ENST00000537981 RNASE2P10153 161 aaKnown RBP8.45□□□□□ -1.06
RTN3-208ENST00000537981 Q86TA4 180 aa8.45□□□□□ -1.06
RTN3-208ENST00000537981 FOXC2Q99958 501 aa8.45□□□□□ -1.06
RTN3-208ENST00000537981 PRNDQ9UKY0 176 aa8.45□□□□□ -1.06
RTN3-208ENST00000537981 FOXA2Q9Y261 457 aaPredicted RBP8.45□□□□□ -1.06
RTN3-208ENST00000537981 MRPS17Q9Y2R5 130 aaKnown RBP8.45□□□□□ -1.06
RTN3-208ENST00000537981 LAMA5O15230 3695 aa8.45□□□□□ -1.06
RTN3-208ENST00000537981 TRBV7-3A0A075B6L6 115 aa8.44□□□□□ -1.06
RTN3-208ENST00000537981 H3BVH4 76 aa8.44□□□□□ -1.06
RTN3-208ENST00000537981 RHODO00212 210 aa8.44□□□□□ -1.06
RTN3-208ENST00000537981 CT45A10P0DMU9 189 aa8.44□□□□□ -1.06
RTN3-208ENST00000537981 CRIP1P50238 77 aa8.44□□□□□ -1.06
RTN3-208ENST00000537981 MRPL51Q4U2R6 128 aaKnown RBP8.44□□□□□ -1.06
RTN3-208ENST00000537981 MRPL32Q9BYC8 188 aaKnown RBP8.44□□□□□ -1.06
RTN3-208ENST00000537981 IGHV3-21A0A0B4J1V1 117 aa8.44□□□□□ -1.06
RTN3-208ENST00000537981 LINC01549A6NIU2 74 aa8.44□□□□□ -1.06
RTN3-208ENST00000537981 SPINT2O43291 252 aa8.44□□□□□ -1.06
RTN3-208ENST00000537981 EVI2AP22794 236 aa8.44□□□□□ -1.06
RTN3-208ENST00000537981 GOLT1AQ6ZVE7 132 aa8.44□□□□□ -1.06
RTN3-208ENST00000537981 ANKRD29Q8N6D5 301 aa8.44□□□□□ -1.06
RTN3-208ENST00000537981 RND1Q92730 232 aa8.44□□□□□ -1.06
RTN3-208ENST00000537981 MRPL33O75394 65 aaKnown RBP8.43□□□□□ -1.06
RTN3-208ENST00000537981 IGKCP01834 107 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 PRSS1P07477 247 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 SRD5A1P18405 259 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 PRDX2P32119 198 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 MPV17P39210 176 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 KLF17Q5JT82 389 aaPredicted RBP8.43□□□□□ -1.06
RTN3-208ENST00000537981 C10orf55Q5SWW7 151 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 ATP6V0E2Q8NHE4 81 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 RTL8AQ9BWD3 113 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 Q9H3A6 140 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 DSCAMO60469 2012 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 IGLV3-12A0A075B6K2 115 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 GHRHP01286 108 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 SAA2P0DJI9 122 aaPredicted RBP8.43□□□□□ -1.06
RTN3-208ENST00000537981 GATA1P15976 413 aaPredicted RBP8.43□□□□□ -1.06
RTN3-208ENST00000537981 MRPL23Q16540 153 aaKnown RBP8.43□□□□□ -1.06
RTN3-208ENST00000537981 HIST2H2BCQ6DN03 193 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 HIST2H2BDQ6DRA6 164 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 C11orf53Q8IXP5 236 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 PPDPFLQ8WWR9 84 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 TMEM133Q9H2Q1 129 aa8.43□□□□□ -1.06
RTN3-208ENST00000537981 LOC107984640A0A0U1RRK4 108 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 TMEM89A2RUT3 159 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 ZNF688P0C7X2 276 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 HLA-DRB4P13762 266 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 LPAL2Q16609 132 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 SLC25A48Q6ZT89 311 aaKnown RBP8.42□□□□□ -1.06
RTN3-208ENST00000537981 TEN1Q86WV5 123 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 DLX4Q92988 240 aaPredicted RBP8.42□□□□□ -1.06
RTN3-208ENST00000537981 FBXL15Q9H469 300 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 MRPL35Q9NZE8 188 aaKnown RBP8.42□□□□□ -1.06
RTN3-208ENST00000537981 HLA-DRB4X5D2U9 266 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 CADP27708 2225 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 TCL1BO95988 128 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 LEPP41159 167 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 LOXL3P58215 753 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 MEIG1Q5JSS6 88 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 PLA2G2CQ5R387 149 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 LYZL1Q6UWQ5 148 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 CD177Q8N6Q3 437 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 ZNF714Q96N38 554 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 ZFAND3Q9H8U3 227 aa8.42□□□□□ -1.06
RTN3-208ENST00000537981 PINLYPA6NC86 204 aa8.41□□□□□ -1.06
RTN3-208ENST00000537981 CXCL12P48061 93 aa8.41□□□□□ -1.06
RTN3-208ENST00000537981 CRIP2P52943 208 aaPredicted RBP8.41□□□□□ -1.06
RTN3-208ENST00000537981 PRCDQ00LT1 54 aa8.41□□□□□ -1.06
RTN3-208ENST00000537981 SRSF1Q07955 248 aaKnown RBP eCLIP8.41□□□□□ -1.062e-7■■□□□ 13.4
RTN3-208ENST00000537981 FMC1Q96HJ9 113 aa8.41□□□□□ -1.06
RTN3-208ENST00000537981 C17orf77Q96MU5 243 aa8.41□□□□□ -1.06
RTN3-208ENST00000537981 C8orf49Q96NF6 230 aa8.41□□□□□ -1.06
RTN3-208ENST00000537981 APELAP0DMC3 54 aa8.41□□□□□ -1.06
RTN3-208ENST00000537981 GAGE2BQ13066 116 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms