RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 VAX2Q9UIW0 290 aa11.73□□□□□ -0.53
SFSWAP-206ENST00000537582 K7EQG2 157 aa11.72□□□□□ -0.53
SFSWAP-206ENST00000537582 MEF2BQ02080 365 aaPredicted RBP11.72□□□□□ -0.53
SFSWAP-206ENST00000537582 PDE6HQ13956 83 aa11.72□□□□□ -0.53
SFSWAP-206ENST00000537582 RPH3ALQ9UNE2 315 aa11.72□□□□□ -0.53
SFSWAP-206ENST00000537582 SCO2A0A1W2PP80 73 aa11.71□□□□□ -0.53
SFSWAP-206ENST00000537582 PRAC2D3DTV9 90 aa11.71□□□□□ -0.53
SFSWAP-206ENST00000537582 ZNF688P0C7X2 276 aa11.71□□□□□ -0.53
SFSWAP-206ENST00000537582 SMUG1Q53HV7 270 aa11.71□□□□□ -0.53
SFSWAP-206ENST00000537582 OTORQ9NRC9 128 aa11.71□□□□□ -0.53
SFSWAP-206ENST00000537582 SMCO4Q9NRQ5 59 aa11.71□□□□□ -0.53
SFSWAP-206ENST00000537582 PKD1L1Q8TDX9 2849 aa11.71□□□□□ -0.53
SFSWAP-206ENST00000537582 ZNF253O75346 499 aa11.71□□□□□ -0.54
SFSWAP-206ENST00000537582 SLC25A5P05141 298 aaKnown RBP11.71□□□□□ -0.54
SFSWAP-206ENST00000537582 C9orf66Q5T8R8 295 aa11.71□□□□□ -0.54
SFSWAP-206ENST00000537582 SLC50A1Q9BRV3 221 aa11.71□□□□□ -0.54
SFSWAP-206ENST00000537582 ZNF256Q9Y2P7 627 aaPredicted RBP11.71□□□□□ -0.54
SFSWAP-206ENST00000537582 MEOX2P50222 304 aa11.7□□□□□ -0.54
SFSWAP-206ENST00000537582 PSG9Q00887 426 aa11.7□□□□□ -0.54
SFSWAP-206ENST00000537582 RHEBQ15382 184 aa11.7□□□□□ -0.54
SFSWAP-206ENST00000537582 C15orf54Q8N8G6 183 aa11.7□□□□□ -0.54
SFSWAP-206ENST00000537582 TUBA4BQ9H853 241 aa11.7□□□□□ -0.54
SFSWAP-206ENST00000537582 ARL2-SNX15V9GYD0 113 aa11.7□□□□□ -0.54
SFSWAP-206ENST00000537582 NOTCH3Q9UM47 2321 aa11.69□□□□□ -0.54
SFSWAP-206ENST00000537582 ISLRO14498 428 aa11.69□□□□□ -0.54
SFSWAP-206ENST00000537582 SRP19P09132 144 aaKnown RBP11.69□□□□□ -0.54
SFSWAP-206ENST00000537582 CEBPGP53567 150 aa11.69□□□□□ -0.54
SFSWAP-206ENST00000537582 OXLD1Q5BKU9 147 aa11.69□□□□□ -0.54
SFSWAP-206ENST00000537582 PSMG4Q5JS54 123 aa11.69□□□□□ -0.54
SFSWAP-206ENST00000537582 LYPD1Q8N2G4 141 aa11.69□□□□□ -0.54
SFSWAP-206ENST00000537582 LINC00479Q96M42 142 aa11.69□□□□□ -0.54
SFSWAP-206ENST00000537582 AAMDCQ9H7C9 122 aa11.69□□□□□ -0.54
SFSWAP-206ENST00000537582 CMYA5Q8N3K9 4069 aa11.69□□□□□ -0.54
SFSWAP-206ENST00000537582 IGKV2-40A0A087WW87 121 aaPredicted RBP11.68□□□□□ -0.54
SFSWAP-206ENST00000537582 TRAV25A0A0B4J276 109 aa11.68□□□□□ -0.54
SFSWAP-206ENST00000537582 F6UB75 175 aa11.68□□□□□ -0.54
SFSWAP-206ENST00000537582 IGKV2D-40P01614 121 aaPredicted RBP11.68□□□□□ -0.54
SFSWAP-206ENST00000537582 ZNF705DP0CH99 300 aaPredicted RBP11.68□□□□□ -0.54
SFSWAP-206ENST00000537582 ZNF705BP0CI00 300 aaPredicted RBP11.68□□□□□ -0.54
SFSWAP-206ENST00000537582 PAFAH1B2P68402 229 aa11.68□□□□□ -0.54
SFSWAP-206ENST00000537582 ZNF124Q15973 351 aa11.68□□□□□ -0.54
SFSWAP-206ENST00000537582 PSG3Q16557 428 aa11.68□□□□□ -0.54
SFSWAP-206ENST00000537582 LCN12Q6JVE5 192 aa11.68□□□□□ -0.54
SFSWAP-206ENST00000537582 CYB561D1Q8N8Q1 229 aa11.68□□□□□ -0.54
SFSWAP-206ENST00000537582 SGK494Q96LW2 274 aa11.68□□□□□ -0.54
SFSWAP-206ENST00000537582 ASCL2Q99929 193 aa11.68□□□□□ -0.54
SFSWAP-206ENST00000537582 SPAG8Q99932 426 aaPredicted RBP11.68□□□□□ -0.54
SFSWAP-206ENST00000537582 DERL1Q9BUN8 251 aa11.68□□□□□ -0.54
SFSWAP-206ENST00000537582 EPDR1Q9UM22 224 aa11.68□□□□□ -0.54
SFSWAP-206ENST00000537582 SOHLH1Q5JUK2 328 aa11.67□□□□□ -0.54
SFSWAP-206ENST00000537582 GOLT1AQ6ZVE7 132 aa11.67□□□□□ -0.54
SFSWAP-206ENST00000537582 C5orf17Q8NAS9 161 aa11.67□□□□□ -0.54
SFSWAP-206ENST00000537582 ZNF738Q8NE65 137 aa11.67□□□□□ -0.54
SFSWAP-206ENST00000537582 CMTM2Q8TAZ6 248 aa11.67□□□□□ -0.54
SFSWAP-206ENST00000537582 TRAV8-1A0A0A6YYK1 113 aa11.67□□□□□ -0.54
SFSWAP-206ENST00000537582 TRAV34A0A0B4J273 112 aa11.67□□□□□ -0.54
SFSWAP-206ENST00000537582 C7orf77A4D0Y5 90 aa11.67□□□□□ -0.54
SFSWAP-206ENST00000537582 COLCA2A8K830 154 aa11.67□□□□□ -0.54
SFSWAP-206ENST00000537582 DIRC3C9JPN6 131 aa11.67□□□□□ -0.54
SFSWAP-206ENST00000537582 PEX7O00628 323 aa11.67□□□□□ -0.54
SFSWAP-206ENST00000537582 TCRAP04437 139 aa11.67□□□□□ -0.54
SFSWAP-206ENST00000537582 TAGLN2P37802 199 aaKnown RBP11.67□□□□□ -0.54
SFSWAP-206ENST00000537582 RPUSD4Q96CM3 377 aaKnown RBP11.67□□□□□ -0.54
SFSWAP-206ENST00000537582 MCRIP2Q9BUT9 160 aaKnown RBP11.67□□□□□ -0.54
SFSWAP-206ENST00000537582 OR4C46A6NHA9 309 aa11.66□□□□□ -0.54
SFSWAP-206ENST00000537582 CD7P09564 240 aa11.66□□□□□ -0.54
SFSWAP-206ENST00000537582 INSL3P51460 131 aa11.66□□□□□ -0.54
SFSWAP-206ENST00000537582 DEFB131AP59861 70 aa11.66□□□□□ -0.54
SFSWAP-206ENST00000537582 ERCC8Q13216 396 aa11.66□□□□□ -0.54
SFSWAP-206ENST00000537582 ODF3L2Q3SX64 289 aa11.66□□□□□ -0.54
SFSWAP-206ENST00000537582 PRR31Q5SQ13 230 aa11.66□□□□□ -0.54
SFSWAP-206ENST00000537582 GDF5OSQ5U4N7 250 aa11.66□□□□□ -0.54
SFSWAP-206ENST00000537582 OR2K2Q8NGT1 345 aa11.66□□□□□ -0.54
SFSWAP-206ENST00000537582 C11orf52Q96A22 123 aa11.66□□□□□ -0.54
SFSWAP-206ENST00000537582 WFDC10AQ9H1F0 79 aa11.66□□□□□ -0.54
SFSWAP-206ENST00000537582 MAP6D1Q9H9H5 199 aa11.66□□□□□ -0.54
SFSWAP-206ENST00000537582 RPS10P5Q9NQ39 176 aa11.66□□□□□ -0.54
SFSWAP-206ENST00000537582 TRAV2A0A0B4J234 112 aa11.65□□□□□ -0.54
SFSWAP-206ENST00000537582 PDE6DO43924 150 aa11.65□□□□□ -0.54
SFSWAP-206ENST00000537582 ID1P41134 155 aa11.65□□□□□ -0.54
SFSWAP-206ENST00000537582 BEAN1Q3B7T3 259 aa11.65□□□□□ -0.54
SFSWAP-206ENST00000537582 APRG1Q8IVJ8 170 aa11.65□□□□□ -0.54
SFSWAP-206ENST00000537582 C2CD4CQ8TF44 421 aa11.65□□□□□ -0.54
SFSWAP-206ENST00000537582 VGLL1Q99990 258 aa11.65□□□□□ -0.54
SFSWAP-206ENST00000537582 ATG101Q9BSB4 218 aa11.65□□□□□ -0.54
SFSWAP-206ENST00000537582 F6UZH7 168 aa11.64□□□□□ -0.55
SFSWAP-206ENST00000537582 M0R036 132 aa11.64□□□□□ -0.55
SFSWAP-206ENST00000537582 NDUFS6O75380 124 aaKnown RBP11.64□□□□□ -0.55
SFSWAP-206ENST00000537582 SNRPD3P62318 126 aaKnown RBP11.64□□□□□ -0.55
SFSWAP-206ENST00000537582 RNF212Q495C1 297 aa11.64□□□□□ -0.55
SFSWAP-206ENST00000537582 TXNDC17Q9BRA2 123 aa11.64□□□□□ -0.55
SFSWAP-206ENST00000537582 PRELID1Q9Y255 219 aa11.64□□□□□ -0.55
SFSWAP-206ENST00000537582 KNCNA6PVL3 124 aa11.63□□□□□ -0.55
SFSWAP-206ENST00000537582 G3V4G9 280 aa11.63□□□□□ -0.55
SFSWAP-206ENST00000537582 WIPF1O43516 503 aa11.63□□□□□ -0.55
SFSWAP-206ENST00000537582 IGLV2-11P01706 119 aa11.63□□□□□ -0.55
SFSWAP-206ENST00000537582 CSN1S1P47710 185 aa11.63□□□□□ -0.55
SFSWAP-206ENST00000537582 ZNF674Q2M3X9 581 aa11.63□□□□□ -0.55
SFSWAP-206ENST00000537582 SAMD13Q5VXD3 122 aa11.63□□□□□ -0.55
SFSWAP-206ENST00000537582 Q8TAT8 98 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms