RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 IGHV3-43A0A0B4J1X8 118 aa8.7□□□□□ -1.02
CLSTN3-207ENST00000537408 IGHV3-43DP0DP04 118 aa8.7□□□□□ -1.02
CLSTN3-207ENST00000537408 FHL3Q13643 280 aa8.7□□□□□ -1.02
CLSTN3-207ENST00000537408 EIF4EBP1Q13541 118 aaPredicted RBP8.7□□□□□ -1.02
CLSTN3-207ENST00000537408 CIARTQ8N365 385 aaPredicted RBP8.7□□□□□ -1.02
CLSTN3-207ENST00000537408 C7orf69Q9H7B7 122 aa8.7□□□□□ -1.02
CLSTN3-207ENST00000537408 SMIM9A6NGZ8 99 aa8.7□□□□□ -1.02
CLSTN3-207ENST00000537408 TNFRSF1AP19438 455 aa8.7□□□□□ -1.02
CLSTN3-207ENST00000537408 FAM27E3Q08E93 113 aa8.7□□□□□ -1.02
CLSTN3-207ENST00000537408 ZC2HC1BQ5TFG8 222 aa8.7□□□□□ -1.02
CLSTN3-207ENST00000537408 SRSF12Q8WXF0 261 aaKnown RBP8.7□□□□□ -1.02
CLSTN3-207ENST00000537408 C1orf159Q96HA4 380 aa8.7□□□□□ -1.02
CLSTN3-207ENST00000537408 SSUH2Q9Y2M2 353 aa8.7□□□□□ -1.02
CLSTN3-207ENST00000537408 A4D1N5 150 aa8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 C15orf61A6NNL5 157 aa8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 D6R8Y8 96 aa8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 TMEM158Q8WZ71 300 aa8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 TTTY13Q9BZ97 58 aa8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 A0A1W2PPI3 338 aa8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 WFDC3Q8IUB2 231 aa8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 VKORC1L1Q8N0U8 176 aa8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 BBC3Q96PG8 261 aaPredicted RBP8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 FGF23Q9GZV9 251 aaPredicted RBP8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 PRNDQ9UKY0 176 aa8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 A0A0G2JNJ9 132 aa8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 C19orf71A6NCJ1 209 aa8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 MBD3L4A6NDZ8 208 aaPredicted RBP8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 MBD3L3A6NE82 208 aaPredicted RBP8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 MBD3L5A6NJ08 208 aaPredicted RBP8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 WISP2O76076 250 aa8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 BRWD1-AS2P59051 145 aa8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 Q6ZT83 130 aa8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 MBD3L2Q8NHZ7 208 aaPredicted RBP8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 FOXC2Q99958 501 aa8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 Q9UFV3 132 aa8.69□□□□□ -1.02
CLSTN3-207ENST00000537408 IGKV2D-26A0A0A0MRZ7 120 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 IGHV3-13P01766 116 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 MBNL2Q5VZF2 373 aaKnown RBP8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 PIP4P2Q8N4L2 257 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 Q8NA96 180 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 CARD19Q96LW7 228 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 SPG11Q96JI7 2443 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 ZNF462Q96JM2 2506 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 J3KT08 172 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 CXXC4Q9H2H0 198 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 TMEM160Q9NX00 188 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 CACNA1DQ01668 2161 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 TRAV8-4A0A0B4J246 113 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 ARMS2P0C7Q2 107 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 FXYD7P58549 80 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 TNFAIP6P98066 277 aaPredicted RBP8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 ZNF714Q96N38 554 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 DOPEY1Q5JWR5 2465 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 MYMXA0A1B0GTQ4 84 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 CKS2P33552 79 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 SMCPP49901 116 aaPredicted RBP8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 ANKRD29Q8N6D5 301 aa8.68□□□□□ -1.02
CLSTN3-207ENST00000537408 LOXL1Q08397 574 aaPredicted RBP8.67□□□□□ -1.02
CLSTN3-207ENST00000537408 FAM167A-AS1Q96KT0 104 aa8.67□□□□□ -1.02
CLSTN3-207ENST00000537408 FAM106CPP0CH98 169 aa8.67□□□□□ -1.02
CLSTN3-207ENST00000537408 GLRXP35754 106 aa8.67□□□□□ -1.02
CLSTN3-207ENST00000537408 EMP1P54849 157 aa8.67□□□□□ -1.02
CLSTN3-207ENST00000537408 FAM106AQ4KMX7 169 aa8.67□□□□□ -1.02
CLSTN3-207ENST00000537408 WDR87Q6ZQQ6 2873 aa8.67□□□□□ -1.02
CLSTN3-207ENST00000537408 SPANXCQ9NY87 97 aa8.67□□□□□ -1.02
CLSTN3-207ENST00000537408 DOCK7Q96N67 2140 aa8.67□□□□□ -1.02
CLSTN3-207ENST00000537408 TRAV8-1A0A0A6YYK1 113 aa8.67□□□□□ -1.02
CLSTN3-207ENST00000537408 IGHG4P01861 327 aa8.67□□□□□ -1.02
CLSTN3-207ENST00000537408 MYOD1P15172 320 aa8.67□□□□□ -1.02
CLSTN3-207ENST00000537408 TMEM78Q5T7P6 136 aa8.67□□□□□ -1.02
CLSTN3-207ENST00000537408 ITLN1Q8WWA0 313 aa8.67□□□□□ -1.02
CLSTN3-207ENST00000537408 FOXA2Q9Y261 457 aaPredicted RBP8.67□□□□□ -1.02
CLSTN3-207ENST00000537408 FER1L5A0AVI2 2057 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 A0A096LNJ9 63 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 TRAV3A0A0B4J244 114 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 TRAV4A0A0B4J268 109 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 SRRM4A7MD48 611 aaKnown RBP8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 WIPF1O43516 503 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 SUB1P53999 127 aaKnown RBP eCLIP8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 FOXF2Q12947 444 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 CCL17Q92583 94 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 FLYWCH2Q96CP2 140 aaKnown RBP8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 LINC01549A6NIU2 74 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 SRSF9Q13242 221 aaKnown RBP eCLIP8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 MLST8Q9BVC4 326 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 IFI27L2Q9H2X8 130 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 COL8A2P25067 703 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 GGNQ86UU5 652 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 C10orf126Q8N4M7 172 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 NPYP01303 97 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 LEPP41159 167 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 MFAP4P55083 255 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 LINC00205P59089 165 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 ERHP84090 104 aaKnown RBP8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 SFTA2Q6UW10 78 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 PRNTQ86SH4 94 aa8.66□□□□□ -1.02
CLSTN3-207ENST00000537408 SONP18583 2426 aaKnown RBP8.65□□□□□ -1.02
CLSTN3-207ENST00000537408 SS18L1O75177 396 aaPredicted RBP8.65□□□□□ -1.02
CLSTN3-207ENST00000537408 C15orf53Q8NAA6 179 aa8.65□□□□□ -1.02
CLSTN3-207ENST00000537408 GATD1Q8NB37 220 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms