RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PRB4P10163 310 aaPredicted RBP11.12□□□□□ -0.63
LIG1-203ENST00000536218 LCNL1Q6ZST4 164 aa11.12□□□□□ -0.63
LIG1-203ENST00000536218 DDB2Q92466 427 aa11.12□□□□□ -0.63
LIG1-203ENST00000536218 CHAC1Q9BUX1 264 aa11.12□□□□□ -0.63
LIG1-203ENST00000536218 PGPA6NDG6 321 aa11.12□□□□□ -0.63
LIG1-203ENST00000536218 NPIPB6E9PJ23 425 aa11.12□□□□□ -0.63
LIG1-203ENST00000536218 COX7A2P2O60397 106 aa11.12□□□□□ -0.63
LIG1-203ENST00000536218 GLMPQ8WWB7 406 aa11.12□□□□□ -0.63
LIG1-203ENST00000536218 ERG28Q9UKR5 140 aa11.12□□□□□ -0.63
LIG1-203ENST00000536218 TET2Q6N021 2002 aaPredicted RBP11.11□□□□□ -0.63
LIG1-203ENST00000536218 TRBV7-9A0A0J9YWB2 115 aa11.11□□□□□ -0.63
LIG1-203ENST00000536218 TCRBV4S1A1TA0A5B7 111 aa11.11□□□□□ -0.63
LIG1-203ENST00000536218 COL8A1P27658 744 aa11.11□□□□□ -0.63
LIG1-203ENST00000536218 DPF1Q92782 380 aa11.11□□□□□ -0.63
LIG1-203ENST00000536218 FAM167A-AS1Q96KT0 104 aa11.11□□□□□ -0.63
LIG1-203ENST00000536218 ZNF714Q96N38 554 aa11.11□□□□□ -0.63
LIG1-203ENST00000536218 CTSZQ9UBR2 303 aa11.11□□□□□ -0.63
LIG1-203ENST00000536218 DKK2Q9UBU2 259 aa11.11□□□□□ -0.63
LIG1-203ENST00000536218 LINC00312Q9Y6C7 94 aa11.11□□□□□ -0.63
LIG1-203ENST00000536218 IGLL5B9A064 214 aa11.11□□□□□ -0.63
LIG1-203ENST00000536218 GAGE5Q13069 117 aa11.11□□□□□ -0.63
LIG1-203ENST00000536218 GAGE6Q13070 117 aa11.11□□□□□ -0.63
LIG1-203ENST00000536218 OSR1Q8TAX0 266 aaPredicted RBP11.11□□□□□ -0.63
LIG1-203ENST00000536218 GPR82Q96P67 336 aa11.11□□□□□ -0.63
LIG1-203ENST00000536218 SRRM4A7MD48 611 aaKnown RBP11.1□□□□□ -0.63
LIG1-203ENST00000536218 DIAPH2-AS1Q14236 149 aa11.1□□□□□ -0.63
LIG1-203ENST00000536218 TTC9CQ8N5M4 171 aa11.1□□□□□ -0.63
LIG1-203ENST00000536218 C7orf69Q9H7B7 122 aa11.1□□□□□ -0.63
LIG1-203ENST00000536218 LY6HO94772 140 aa11.1□□□□□ -0.63
LIG1-203ENST00000536218 HSPE1P61604 102 aaKnown RBP11.1□□□□□ -0.63
LIG1-203ENST00000536218 LY6DQ14210 128 aa11.1□□□□□ -0.63
LIG1-203ENST00000536218 SLC25A48Q6ZT89 311 aaKnown RBP11.1□□□□□ -0.63
LIG1-203ENST00000536218 SOX21Q9Y651 276 aaPredicted RBP11.1□□□□□ -0.63
LIG1-203ENST00000536218 PLXNB1O43157 2135 aa11.1□□□□□ -0.63
LIG1-203ENST00000536218 XGP55808 180 aa11.1□□□□□ -0.63
LIG1-203ENST00000536218 KLRB1Q12918 225 aa11.1□□□□□ -0.63
LIG1-203ENST00000536218 LGALS9BQ3B8N2 356 aa11.1□□□□□ -0.63
LIG1-203ENST00000536218 LGALS9CQ6DKI2 356 aa11.1□□□□□ -0.63
LIG1-203ENST00000536218 OR10X1Q8NGY0 326 aa11.1□□□□□ -0.63
LIG1-203ENST00000536218 FLYWCH2Q96CP2 140 aaKnown RBP11.1□□□□□ -0.63
LIG1-203ENST00000536218 MRPL20Q9BYC9 149 aaKnown RBP11.1□□□□□ -0.63
LIG1-203ENST00000536218 PIEZO1Q92508 2521 aa11.09□□□□□ -0.63
LIG1-203ENST00000536218 E9PLD3 99 aa11.09□□□□□ -0.63
LIG1-203ENST00000536218 KIR2DS2P43631 304 aa11.09□□□□□ -0.63
LIG1-203ENST00000536218 UCNP55089 124 aa11.09□□□□□ -0.63
LIG1-203ENST00000536218 CDIP1Q9H305 208 aa11.09□□□□□ -0.63
LIG1-203ENST00000536218 EPDR1Q9UM22 224 aa11.09□□□□□ -0.63
LIG1-203ENST00000536218 IGKV2D-26A0A0A0MRZ7 120 aa11.09□□□□□ -0.63
LIG1-203ENST00000536218 C15orf61A6NNL5 157 aa11.09□□□□□ -0.63
LIG1-203ENST00000536218 PDPNQ86YL7 162 aa11.09□□□□□ -0.63
LIG1-203ENST00000536218 CLEC3BP05452 202 aa11.08□□□□□ -0.64
LIG1-203ENST00000536218 ARMS2P0C7Q2 107 aa11.08□□□□□ -0.64
LIG1-203ENST00000536218 CACNG8Q8WXS5 425 aa11.08□□□□□ -0.64
LIG1-203ENST00000536218 A0A1B0GW15 77 aa11.08□□□□□ -0.64
LIG1-203ENST00000536218 C10orf113Q5VZT2 155 aa11.08□□□□□ -0.64
LIG1-203ENST00000536218 SFTA2Q6UW10 78 aa11.08□□□□□ -0.64
LIG1-203ENST00000536218 Q6ZUT4 128 aa11.08□□□□□ -0.64
LIG1-203ENST00000536218 PHLDA1Q8WV24 401 aaPredicted RBP11.08□□□□□ -0.64
LIG1-203ENST00000536218 DCHS2Q6V1P9 2916 aa11.08□□□□□ -0.64
LIG1-203ENST00000536218 ABCA1O95477 2261 aa11.08□□□□□ -0.64
LIG1-203ENST00000536218 A0A096LNJ9 63 aa11.08□□□□□ -0.64
LIG1-203ENST00000536218 TRAV8-1A0A0A6YYK1 113 aa11.08□□□□□ -0.64
LIG1-203ENST00000536218 FOXI1Q12951 378 aa11.08□□□□□ -0.64
LIG1-203ENST00000536218 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.08□□□□□ -0.64
LIG1-203ENST00000536218 IFI27L1Q96BM0 104 aa11.08□□□□□ -0.64
LIG1-203ENST00000536218 SIGLEC8Q9NYZ4 499 aa11.08□□□□□ -0.64
LIG1-203ENST00000536218 HIVEP3Q5T1R4 2406 aa11.07□□□□□ -0.64
LIG1-203ENST00000536218 IGHV3-72A0A0B4J1Y9 119 aa11.07□□□□□ -0.64
LIG1-203ENST00000536218 CIARTQ8N365 385 aaPredicted RBP11.07□□□□□ -0.64
LIG1-203ENST00000536218 ASCL2Q99929 193 aa11.07□□□□□ -0.64
LIG1-203ENST00000536218 PRSS29PA6NIE9 313 aa11.07□□□□□ -0.64
LIG1-203ENST00000536218 B9A039 149 aa11.07□□□□□ -0.64
LIG1-203ENST00000536218 PRELID3AQ96N28 172 aa11.07□□□□□ -0.64
LIG1-203ENST00000536218 ARHGAP32A7KAX9 2087 aa11.06□□□□□ -0.64
LIG1-203ENST00000536218 A0A1B0GUT8 65 aa11.06□□□□□ -0.64
LIG1-203ENST00000536218 FAM90A9PA6NNJ1 464 aa11.06□□□□□ -0.64
LIG1-203ENST00000536218 LOXP28300 417 aaPredicted RBP11.06□□□□□ -0.64
LIG1-203ENST00000536218 SSBP2P81877 361 aaPredicted RBP11.06□□□□□ -0.64
LIG1-203ENST00000536218 SRSF12Q8WXF0 261 aaKnown RBP11.06□□□□□ -0.64
LIG1-203ENST00000536218 HARBI1Q96MB7 349 aa11.06□□□□□ -0.64
LIG1-203ENST00000536218 C1QTNF4Q9BXJ3 329 aa11.06□□□□□ -0.64
LIG1-203ENST00000536218 MRPL32Q9BYC8 188 aaKnown RBP11.06□□□□□ -0.64
LIG1-203ENST00000536218 SAA1P0DJI8 122 aaPredicted RBP11.06□□□□□ -0.64
LIG1-203ENST00000536218 ADORA2A-AS1P86434 159 aa11.06□□□□□ -0.64
LIG1-203ENST00000536218 ZNF502Q8TBZ5 544 aa11.06□□□□□ -0.64
LIG1-203ENST00000536218 PRSS22Q9GZN4 317 aa11.06□□□□□ -0.64
LIG1-203ENST00000536218 GTSCR1Q86UQ5 136 aa11.06□□□□□ -0.64
LIG1-203ENST00000536218 CEND1Q8N111 149 aa11.06□□□□□ -0.64
LIG1-203ENST00000536218 OR5AN1Q8NGI8 311 aa11.06□□□□□ -0.64
LIG1-203ENST00000536218 TRBV25-1A0A075B6N4 114 aa11.05□□□□□ -0.64
LIG1-203ENST00000536218 D6R8Y8 96 aa11.05□□□□□ -0.64
LIG1-203ENST00000536218 ENSAO43768 121 aaKnown RBP11.05□□□□□ -0.64
LIG1-203ENST00000536218 ORM2P19652 201 aa11.05□□□□□ -0.64
LIG1-203ENST00000536218 KLRD1Q13241 179 aa11.05□□□□□ -0.64
LIG1-203ENST00000536218 LINC00574Q9H8X3 128 aa11.05□□□□□ -0.64
LIG1-203ENST00000536218 TMEM14BQ9NUH8 114 aa11.05□□□□□ -0.64
LIG1-203ENST00000536218 HAX1O00165 279 aa11.05□□□□□ -0.64
LIG1-203ENST00000536218 FHL3Q13643 280 aa11.05□□□□□ -0.64
LIG1-203ENST00000536218 Q71RC1 249 aaPredicted RBP11.05□□□□□ -0.64
LIG1-203ENST00000536218 TM2D2Q9BX73 214 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms