RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 NEU4Q8WWR8 484 aaPredicted RBP4.49□□□□□ -1.69
VPS33A-203ENST00000536212 RPEQ96AT9 228 aa4.49□□□□□ -1.69
VPS33A-203ENST00000536212 ZNF414Q96IQ9 312 aa4.49□□□□□ -1.69
VPS33A-203ENST00000536212 TMEM191AQ9H0A3 160 aa4.49□□□□□ -1.69
VPS33A-203ENST00000536212 HSPB8Q9UJY1 196 aa4.49□□□□□ -1.69
VPS33A-203ENST00000536212 PSG8Q9UQ74 426 aa4.49□□□□□ -1.69
VPS33A-203ENST00000536212 COX11Q9Y6N1 276 aa4.49□□□□□ -1.69
VPS33A-203ENST00000536212 U3KQK5 164 aa4.49□□□□□ -1.69
VPS33A-203ENST00000536212 KNTC1P50748 2209 aa4.49□□□□□ -1.69
VPS33A-203ENST00000536212 GPR179Q6PRD1 2367 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.48□□□□□ -1.69
VPS33A-203ENST00000536212 FBLL1A6NHQ2 334 aaKnown RBP4.48□□□□□ -1.69
VPS33A-203ENST00000536212 K7EQM0 130 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 M0QZ24 198 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 CCL25O15444 150 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 CD24P25063 80 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 HINT1P49773 126 aaPredicted RBP4.48□□□□□ -1.69
VPS33A-203ENST00000536212 PDE6HQ13956 83 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 VAMP3Q15836 100 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 LDLRAD2Q5SZI1 272 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 UNQ5815/PRO19632Q6UWF5 114 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 Q71RC1 249 aaPredicted RBP4.48□□□□□ -1.69
VPS33A-203ENST00000536212 S100A7AQ86SG5 101 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 IGFBPL1Q8WX77 278 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 ZC2HC1AQ96GY0 325 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 C17orf77Q96MU5 243 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 PMCHL2Q9BQD1 86 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 MAP1LC3CQ9BXW4 147 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 SCRT2Q9NQ03 307 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 DPM3Q9P2X0 92 aa4.48□□□□□ -1.69
VPS33A-203ENST00000536212 HEATR1Q9H583 2144 aaKnown RBP4.48□□□□□ -1.69
VPS33A-203ENST00000536212 IGLV11-55A0A075B6I3 123 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 TRAV25A0A0B4J276 109 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 IGHV2-70DA0A0C4DH43 119 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 hDV102S1A0JD36 115 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 TMEM213A2RRL7 107 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 ODF3BA8MYP8 253 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 M0R1W7 72 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 TIMM23O14925 209 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 NBR2O15453 112 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 TGFAP01135 160 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 ARMS2P0C7Q2 107 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 APELAP0DMC3 54 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 COX7A1P24310 79 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 HTR1DP28221 377 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 DLX1P56177 255 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 RHOGP84095 191 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 EBI3Q14213 229 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 KLK9Q2XQG4 91 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 ZNF672Q499Z4 452 aaPredicted RBP4.47□□□□□ -1.69
VPS33A-203ENST00000536212 C5orf47Q569G3 176 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 BVES-AS1Q5T3Y7 98 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 SLC25A34Q6PIV7 304 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 Q6ZSN1 163 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 CITED1Q99966 193 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 ZNF747Q9BV97 191 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 NPFFR1Q9GZQ6 430 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 KLK9Q9UKQ9 250 aa4.47□□□□□ -1.69
VPS33A-203ENST00000536212 ZDBF2Q9HCK1 2354 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 A0A096LNJ9 63 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 LINC01546A6NGU7 62 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 OOSP1A8MZH6 123 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 LYNX1G3V0Z9 82 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 TAX1BP3O14907 124 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 SCGB2A1O75556 95 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 SMIM17P0DL12 118 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 LYNX1P0DP58 116 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 COX8AP10176 69 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 PRTN3P24158 256 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 FCGR2BP31994 310 aaPredicted RBP4.46□□□□□ -1.7
VPS33A-203ENST00000536212 CEACAM3P40198 252 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 CSN1S1P47710 185 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 CRYBA4P53673 196 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 PLGLAQ15195 96 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 FAM104BQ5XKR9 115 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 C12orf54Q6X4T0 127 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 TTC9CQ8N5M4 171 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 DEFB125Q8N687 156 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 Q8N6K4 173 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 OR10AG1Q8NH19 301 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 CST9LQ9H4G1 147 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 YAE1D1Q9NRH1 226 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 TNCP24821 2201 aa4.46□□□□□ -1.7
VPS33A-203ENST00000536212 LOC105371242A0A075B767 164 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 TMEM189A5PLL7 270 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 F8WDY8 70 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 K7ENP7 123 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 M0R3E3 92 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 TRIAP1O43715 76 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 CD5LO43866 347 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 GNG7O60262 68 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 CNIH1O95406 144 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 IL4P05112 153 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 IGLC6P0CF74 106 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 CT45A10P0DMU9 189 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 RPL7P18124 248 aaKnown RBP4.45□□□□□ -1.7
VPS33A-203ENST00000536212 ZNF138P52744 262 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 PSG9Q00887 426 aa4.45□□□□□ -1.7
VPS33A-203ENST00000536212 HIST1H1AQ02539 215 aaPredicted RBP4.45□□□□□ -1.7
VPS33A-203ENST00000536212 PRB3Q04118 309 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms