RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 C10orf113Q5VZT2 155 aa8.96□□□□□ -0.98
TNFRSF1A-207ENST00000535958 C9orf170A2RU37 121 aa8.95□□□□□ -0.98
TNFRSF1A-207ENST00000535958 MRPS12O15235 138 aaKnown RBP8.95□□□□□ -0.98
TNFRSF1A-207ENST00000535958 CCNKO75909 580 aa8.95□□□□□ -0.98
TNFRSF1A-207ENST00000535958 DAZ2Q13117 558 aaKnown RBP8.95□□□□□ -0.98
TNFRSF1A-207ENST00000535958 RAB31Q13636 194 aa8.95□□□□□ -0.98
TNFRSF1A-207ENST00000535958 TMEM14EPQ6UXP3 125 aa8.95□□□□□ -0.98
TNFRSF1A-207ENST00000535958 PATE2Q6UY27 113 aa8.95□□□□□ -0.98
TNFRSF1A-207ENST00000535958 Q6ZTI0 123 aa8.95□□□□□ -0.98
TNFRSF1A-207ENST00000535958 ZBTB8BQ8NAP8 495 aaPredicted RBP8.95□□□□□ -0.98
TNFRSF1A-207ENST00000535958 ODF3Q96PU9 254 aa8.95□□□□□ -0.98
TNFRSF1A-207ENST00000535958 SOSTQ9BQB4 213 aa8.95□□□□□ -0.98
TNFRSF1A-207ENST00000535958 PGPEP1Q9NXJ5 209 aa8.95□□□□□ -0.98
TNFRSF1A-207ENST00000535958 TRGV1A0A0A0MS02 117 aa8.94□□□□□ -0.98
TNFRSF1A-207ENST00000535958 PRAC2D3DTV9 90 aa8.94□□□□□ -0.98
TNFRSF1A-207ENST00000535958 SLC17A3O00476 420 aa8.94□□□□□ -0.98
TNFRSF1A-207ENST00000535958 AGPAT2O15120 278 aa8.94□□□□□ -0.98
TNFRSF1A-207ENST00000535958 TSC22D2O75157 780 aa8.94□□□□□ -0.98
TNFRSF1A-207ENST00000535958 IFNA5P01569 189 aa8.94□□□□□ -0.98
TNFRSF1A-207ENST00000535958 INAFM2P0DMQ5 153 aa8.94□□□□□ -0.98
TNFRSF1A-207ENST00000535958 GUK1Q16774 197 aa8.94□□□□□ -0.98
TNFRSF1A-207ENST00000535958 C4orf46Q504U0 113 aa8.94□□□□□ -0.98
TNFRSF1A-207ENST00000535958 CDPF1Q6NVV7 123 aa8.94□□□□□ -0.98
TNFRSF1A-207ENST00000535958 Q6ZRG5 221 aa8.94□□□□□ -0.98
TNFRSF1A-207ENST00000535958 FRZBQ92765 325 aa8.94□□□□□ -0.98
TNFRSF1A-207ENST00000535958 ICOSQ9Y6W8 199 aa8.94□□□□□ -0.98
TNFRSF1A-207ENST00000535958 A0A096LPF7 62 aa8.93□□□□□ -0.98
TNFRSF1A-207ENST00000535958 NPIPB6E9PJ23 425 aa8.93□□□□□ -0.98
TNFRSF1A-207ENST00000535958 H3BMQ9 156 aa8.93□□□□□ -0.98
TNFRSF1A-207ENST00000535958 L7N2F9 121 aa8.93□□□□□ -0.98
TNFRSF1A-207ENST00000535958 SLC25A5P05141 298 aaKnown RBP8.93□□□□□ -0.98
TNFRSF1A-207ENST00000535958 TAS2R30P59541 319 aa8.93□□□□□ -0.98
TNFRSF1A-207ENST00000535958 VAMP2P63027 116 aa8.93□□□□□ -0.98
TNFRSF1A-207ENST00000535958 OPCMLQ14982 345 aa8.93□□□□□ -0.98
TNFRSF1A-207ENST00000535958 IAH1Q2TAA2 248 aaPredicted RBP8.93□□□□□ -0.98
TNFRSF1A-207ENST00000535958 TRIQKQ629K1 86 aa8.93□□□□□ -0.98
TNFRSF1A-207ENST00000535958 NFE4Q86UQ8 179 aa8.93□□□□□ -0.98
TNFRSF1A-207ENST00000535958 OR1L4Q8NGR5 311 aa8.93□□□□□ -0.98
TNFRSF1A-207ENST00000535958 GGACTQ9BVM4 153 aa8.93□□□□□ -0.98
TNFRSF1A-207ENST00000535958 GSKIPQ9P0R6 139 aa8.93□□□□□ -0.98
TNFRSF1A-207ENST00000535958 FUT9Q9Y231 359 aa8.93□□□□□ -0.98
TNFRSF1A-207ENST00000535958 V9GYH0 126 aa8.93□□□□□ -0.98
TNFRSF1A-207ENST00000535958 TRAV9-2A0A087WT02 112 aa8.92□□□□□ -0.98
TNFRSF1A-207ENST00000535958 C7orf71A4D174 169 aa8.92□□□□□ -0.98
TNFRSF1A-207ENST00000535958 NAP1L6A6NFF2 107 aa8.92□□□□□ -0.98
TNFRSF1A-207ENST00000535958 NXPH4O95158 308 aa8.92□□□□□ -0.98
TNFRSF1A-207ENST00000535958 CT45A10P0DMU9 189 aa8.92□□□□□ -0.98
TNFRSF1A-207ENST00000535958 IGLC2P0DOY2 106 aa8.92□□□□□ -0.98
TNFRSF1A-207ENST00000535958 CAMLGP49069 296 aa8.92□□□□□ -0.98
TNFRSF1A-207ENST00000535958 EIF4E3Q8N5X7 224 aaKnown RBP8.92□□□□□ -0.98
TNFRSF1A-207ENST00000535958 ZNF431Q8TF32 576 aaPredicted RBP8.92□□□□□ -0.98
TNFRSF1A-207ENST00000535958 PFDN5Q99471 154 aa8.92□□□□□ -0.98
TNFRSF1A-207ENST00000535958 GSN-AS1Q9NRJ2 163 aa8.92□□□□□ -0.98
TNFRSF1A-207ENST00000535958 LINC00854A0A1B0GVQ3 168 aa8.91□□□□□ -0.98
TNFRSF1A-207ENST00000535958 CCDC160A6NGH7 325 aa8.91□□□□□ -0.98
TNFRSF1A-207ENST00000535958 PAX4O43316 350 aa8.91□□□□□ -0.98
TNFRSF1A-207ENST00000535958 OR4E1P0C645 316 aa8.91□□□□□ -0.98
TNFRSF1A-207ENST00000535958 BCAP31P51572 246 aa8.91□□□□□ -0.98
TNFRSF1A-207ENST00000535958 ZNF846Q147U1 533 aa8.91□□□□□ -0.98
TNFRSF1A-207ENST00000535958 VSIG2Q96IQ7 327 aa8.91□□□□□ -0.98
TNFRSF1A-207ENST00000535958 MGST2Q99735 147 aa8.91□□□□□ -0.98
TNFRSF1A-207ENST00000535958 ARPC5LQ9BPX5 153 aa8.91□□□□□ -0.98
TNFRSF1A-207ENST00000535958 CENPXA8MT69 81 aa8.9□□□□□ -0.98
TNFRSF1A-207ENST00000535958 H3BQ15 152 aa8.9□□□□□ -0.98
TNFRSF1A-207ENST00000535958 RGS13O14921 159 aa8.9□□□□□ -0.98
TNFRSF1A-207ENST00000535958 NDUFB6O95139 128 aa8.9□□□□□ -0.98
TNFRSF1A-207ENST00000535958 SLAQ13239 276 aa8.9□□□□□ -0.98
TNFRSF1A-207ENST00000535958 SPANXN2Q5MJ10 180 aa8.9□□□□□ -0.98
TNFRSF1A-207ENST00000535958 Q5VSD8 79 aa8.9□□□□□ -0.98
TNFRSF1A-207ENST00000535958 LYPD1Q8N2G4 141 aa8.9□□□□□ -0.98
TNFRSF1A-207ENST00000535958 C12orf45Q8N5I9 185 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF1A-207ENST00000535958 TMEM37Q8WXS4 190 aa8.9□□□□□ -0.98
TNFRSF1A-207ENST00000535958 MRPL53Q96EL3 112 aaKnown RBP8.9□□□□□ -0.98
TNFRSF1A-207ENST00000535958 C18orf15Q96N68 181 aa8.9□□□□□ -0.98
TNFRSF1A-207ENST00000535958 DNAJC4Q9NNZ3 241 aa8.9□□□□□ -0.98
TNFRSF1A-207ENST00000535958 RCL1Q9Y2P8 373 aaKnown RBP8.9□□□□□ -0.98
TNFRSF1A-207ENST00000535958 DMBT1Q9UGM3 2413 aaPredicted RBP8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 ZNF253O75346 499 aa8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 MPDU1O75352 247 aa8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 IGHV3-53P01767 116 aa8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 GPX1P07203 203 aa8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 RNASE4P34096 147 aaKnown RBP8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 CAV2P51636 162 aa8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 BTN1A1Q13410 526 aa8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 ANXA2RQ3ZCQ2 193 aa8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 MORN5Q5VZ52 161 aa8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 NRARPQ7Z6K4 114 aa8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 PCNPQ8WW12 178 aaKnown RBP8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 SAT2Q96F10 170 aaPredicted RBP8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 AAMDCQ9H7C9 122 aa8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 FLVCR2Q9UPI3 526 aa8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 TIMM9Q9Y5J7 89 aa8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 LY96Q9Y6Y9 160 aa8.89□□□□□ -0.99
TNFRSF1A-207ENST00000535958 C7orf66A4D0T2 115 aa8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 ZNF324O75467 553 aaPredicted RBP8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 HIST1H1EP10412 219 aaKnown RBP8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 FUSP35637 526 aaKnown RBP eCLIP8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 TCL1AP56279 114 aa8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 BAXQ07812 192 aa8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 ARL16Q0P5N6 197 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms