RNA–Protein interactions for RNA: ENST00000535934.2

POLE-208, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 5

Gene POLE, Length 1,561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-208	ENST00000535934	DDB2	Q92466	427 aa		10.86	□□□□□ -0.67
POLE-208	ENST00000535934	C11orf52	Q96A22	123 aa		10.86	□□□□□ -0.67
POLE-208	ENST00000535934	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	10.86	□□□□□ -0.67
POLE-208	ENST00000535934	LINC00869	P0C866	280 aa		10.85	□□□□□ -0.67
POLE-208	ENST00000535934	NPPC	P23582	126 aa		10.85	□□□□□ -0.67
POLE-208	ENST00000535934	CD69	Q07108	199 aa		10.85	□□□□□ -0.67
POLE-208	ENST00000535934	OR51H1	Q8NH63	302 aa		10.85	□□□□□ -0.67
POLE-208	ENST00000535934	ARPC1A	Q92747	370 aa		10.85	□□□□□ -0.67
POLE-208	ENST00000535934	NUDT11	Q96G61	164 aa		10.85	□□□□□ -0.67
POLE-208	ENST00000535934	ST20	Q9HBF5	79 aa		10.85	□□□□□ -0.67
POLE-208	ENST00000535934	IGKV1-5	P01602	117 aa		10.84	□□□□□ -0.67
POLE-208	ENST00000535934	LGALS1	P09382	135 aa	Known RBP	10.84	□□□□□ -0.67
POLE-208	ENST00000535934	DUT	P33316	252 aa	Known RBP	10.84	□□□□□ -0.67
POLE-208	ENST00000535934	LGALS7	P47929	136 aa		10.84	□□□□□ -0.67
POLE-208	ENST00000535934	TMEM177	Q53S58	311 aa		10.84	□□□□□ -0.67
POLE-208	ENST00000535934		Q6ZRM9	215 aa		10.84	□□□□□ -0.67
POLE-208	ENST00000535934	KMT2C	Q8NEZ4	4911 aa	Known RBP	10.83	□□□□□ -0.67
POLE-208	ENST00000535934		A0A1W2PS18	150 aa		10.83	□□□□□ -0.68
POLE-208	ENST00000535934	OVOL1	O14753	267 aa		10.83	□□□□□ -0.68
POLE-208	ENST00000535934	IGLV2-14	P01704	120 aa		10.83	□□□□□ -0.68
POLE-208	ENST00000535934	C3orf79	P0CE67	100 aa		10.83	□□□□□ -0.68
POLE-208	ENST00000535934	AREG	P15514	252 aa		10.83	□□□□□ -0.68
POLE-208	ENST00000535934	HINT1	P49773	126 aa	Predicted RBP	10.83	□□□□□ -0.68
POLE-208	ENST00000535934	TCF24	Q7RTU0	167 aa		10.83	□□□□□ -0.68
POLE-208	ENST00000535934	NIT1	Q86X76	327 aa		10.83	□□□□□ -0.68
POLE-208	ENST00000535934	MMD2	Q8IY49	270 aa		10.83	□□□□□ -0.68
POLE-208	ENST00000535934	HARBI1	Q96MB7	349 aa		10.83	□□□□□ -0.68
POLE-208	ENST00000535934	OSTC	Q9NRP0	149 aa		10.83	□□□□□ -0.68
POLE-208	ENST00000535934	RBM7	Q9Y580	266 aa	Known RBP	10.83	□□□□□ -0.68
POLE-208	ENST00000535934	LINC01619	G3V211	115 aa		10.82	□□□□□ -0.68
POLE-208	ENST00000535934	RBFOX2	O43251	390 aa	Known RBP eCLIP	10.82	□□□□□ -0.68	5e-8	■□□□□ 9.4
POLE-208	ENST00000535934	TNFSF12	O43508	249 aa		10.82	□□□□□ -0.68
POLE-208	ENST00000535934	RBMXL2	O75526	392 aa	Known RBP	10.82	□□□□□ -0.68
POLE-208	ENST00000535934	CNIH1	O95406	144 aa		10.82	□□□□□ -0.68
POLE-208	ENST00000535934	TRGV3	P03979	118 aa		10.82	□□□□□ -0.68
POLE-208	ENST00000535934	OPRK1	P41145	380 aa		10.82	□□□□□ -0.68
POLE-208	ENST00000535934	NAT8B	Q9UHF3	227 aa		10.82	□□□□□ -0.68
POLE-208	ENST00000535934	WDR83OS	Q9Y284	106 aa		10.82	□□□□□ -0.68
POLE-208	ENST00000535934	TMEM238L	A0A1B0GVL6	79 aa		10.82	□□□□□ -0.68
POLE-208	ENST00000535934	TMEM238	C9JI98	176 aa		10.82	□□□□□ -0.68
POLE-208	ENST00000535934	IGKV1-39	P01597	117 aa		10.82	□□□□□ -0.68
POLE-208	ENST00000535934	IGKV1D-39	P04432	117 aa		10.82	□□□□□ -0.68
POLE-208	ENST00000535934	APELA	P0DMC3	54 aa		10.82	□□□□□ -0.68
POLE-208	ENST00000535934	NPY1R	P25929	384 aa		10.82	□□□□□ -0.68
POLE-208	ENST00000535934	RPL30	P62888	115 aa	Known RBP	10.82	□□□□□ -0.68
POLE-208	ENST00000535934	CATR1	Q13166	79 aa		10.82	□□□□□ -0.68
POLE-208	ENST00000535934	OCC1	Q8TAD7	63 aa		10.82	□□□□□ -0.68
POLE-208	ENST00000535934	GATAD1	Q8WUU5	269 aa		10.82	□□□□□ -0.68
POLE-208	ENST00000535934	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.82	□□□□□ -0.68
POLE-208	ENST00000535934	PMS2P5	A8MQ11	134 aa		10.81	□□□□□ -0.68
POLE-208	ENST00000535934	STAG3L2	P0CL84	134 aa		10.81	□□□□□ -0.68
POLE-208	ENST00000535934	STAG3L3	P0CL85	134 aa		10.81	□□□□□ -0.68
POLE-208	ENST00000535934	INSL3	P51460	131 aa		10.81	□□□□□ -0.68
POLE-208	ENST00000535934	BRWD1-AS2	P59051	145 aa		10.81	□□□□□ -0.68
POLE-208	ENST00000535934	PMCHL2	Q9BQD1	86 aa		10.81	□□□□□ -0.68
POLE-208	ENST00000535934	ZNF355P	Q9NSJ1	428 aa		10.81	□□□□□ -0.68
POLE-208	ENST00000535934	HMGB3	O15347	200 aa	Known RBP	10.8	□□□□□ -0.68
POLE-208	ENST00000535934	SAP30	O75446	220 aa		10.8	□□□□□ -0.68
POLE-208	ENST00000535934	ATP5G3	P48201	142 aa		10.8	□□□□□ -0.68
POLE-208	ENST00000535934	RTL8B	Q17RB0	113 aa		10.8	□□□□□ -0.68
POLE-208	ENST00000535934	MRPL54	Q6P161	138 aa	Known RBP	10.8	□□□□□ -0.68
POLE-208	ENST00000535934	DEFB125	Q8N687	156 aa		10.8	□□□□□ -0.68
POLE-208	ENST00000535934	GPHA2	Q96T91	129 aa		10.8	□□□□□ -0.68
POLE-208	ENST00000535934	SCGB1A1	P11684	91 aa		10.79	□□□□□ -0.68
POLE-208	ENST00000535934	PMCH	P20382	165 aa		10.79	□□□□□ -0.68
POLE-208	ENST00000535934	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.79	□□□□□ -0.68
POLE-208	ENST00000535934	ZNF585B	Q52M93	769 aa		10.79	□□□□□ -0.68
POLE-208	ENST00000535934	TMEM136	Q6ZRR5	245 aa		10.79	□□□□□ -0.68
POLE-208	ENST00000535934	ZNF645	Q8N7E2	425 aa		10.79	□□□□□ -0.68
POLE-208	ENST00000535934	TEX45	Q8NA69	505 aa		10.79	□□□□□ -0.68
POLE-208	ENST00000535934	ADTRP	Q96IZ2	230 aa		10.79	□□□□□ -0.68
POLE-208	ENST00000535934	ASCL2	Q99929	193 aa		10.79	□□□□□ -0.68
POLE-208	ENST00000535934	CHRDL1	Q9BU40	450 aa		10.79	□□□□□ -0.68
POLE-208	ENST00000535934	PEF1	Q9UBV8	284 aa	Known RBP	10.79	□□□□□ -0.68
POLE-208	ENST00000535934	ISLR	O14498	428 aa		10.78	□□□□□ -0.68
POLE-208	ENST00000535934	FCGR3B	O75015	233 aa		10.78	□□□□□ -0.68
POLE-208	ENST00000535934	TRBV12-3	P01733	135 aa		10.78	□□□□□ -0.68
POLE-208	ENST00000535934	NBEAP1	P0C6P0	100 aa		10.78	□□□□□ -0.68
POLE-208	ENST00000535934		P0C879	139 aa		10.78	□□□□□ -0.68
POLE-208	ENST00000535934	UBE2G1	P62253	170 aa		10.78	□□□□□ -0.68
POLE-208	ENST00000535934	KLF5	Q13887	457 aa	Predicted RBP	10.78	□□□□□ -0.68
POLE-208	ENST00000535934	C10orf55	Q5SWW7	151 aa		10.78	□□□□□ -0.68
POLE-208	ENST00000535934	OR4A47	Q6IF82	309 aa		10.78	□□□□□ -0.68
POLE-208	ENST00000535934	VKORC1L1	Q8N0U8	176 aa		10.78	□□□□□ -0.68
POLE-208	ENST00000535934	TSKU	Q8WUA8	353 aa		10.78	□□□□□ -0.68
POLE-208	ENST00000535934	COMMD5	Q9GZQ3	224 aa		10.78	□□□□□ -0.68
POLE-208	ENST00000535934	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.78	□□□□□ -0.68
POLE-208	ENST00000535934		V9GYV3	84 aa		10.78	□□□□□ -0.68
POLE-208	ENST00000535934		H3BUA1	57 aa		10.77	□□□□□ -0.68
POLE-208	ENST00000535934	APCS	P02743	223 aa		10.77	□□□□□ -0.68
POLE-208	ENST00000535934	SAA1	P0DJI8	122 aa	Predicted RBP	10.77	□□□□□ -0.68
POLE-208	ENST00000535934	TNXA	Q16473	311 aa		10.77	□□□□□ -0.68
POLE-208	ENST00000535934	VMA21	Q3ZAQ7	101 aa		10.77	□□□□□ -0.68
POLE-208	ENST00000535934	TIGIT	Q495A1	244 aa		10.77	□□□□□ -0.68
POLE-208	ENST00000535934	GTF2H5	Q6ZYL4	71 aa		10.77	□□□□□ -0.68
POLE-208	ENST00000535934	OSR1	Q8TAX0	266 aa	Predicted RBP	10.77	□□□□□ -0.68
POLE-208	ENST00000535934	SRSF12	Q8WXF0	261 aa	Known RBP	10.77	□□□□□ -0.68
POLE-208	ENST00000535934	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.77	□□□□□ -0.68
POLE-208	ENST00000535934	HSBP1	O75506	76 aa		10.77	□□□□□ -0.69
POLE-208	ENST00000535934	BRI3	O95415	125 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 61 ms