RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 HIGD1CA8MV81 97 aa10.3□□□□□ -0.76
BEST1-208ENST00000534553 ELANEP08246 267 aa10.3□□□□□ -0.76
BEST1-208ENST00000534553 TCL1AP56279 114 aa10.3□□□□□ -0.76
BEST1-208ENST00000534553 Q6AWC8 147 aa10.3□□□□□ -0.76
BEST1-208ENST00000534553 NUP35Q8NFH5 326 aa10.3□□□□□ -0.76
BEST1-208ENST00000534553 KLK15Q9H2R5 256 aa10.3□□□□□ -0.76
BEST1-208ENST00000534553 PEF1Q9UBV8 284 aaKnown RBP10.3□□□□□ -0.76
BEST1-208ENST00000534553 ZFHX3Q15911 3703 aa10.29□□□□□ -0.76
BEST1-208ENST00000534553 IGHV3OR16-8A0A075B7F1 116 aa10.29□□□□□ -0.76
BEST1-208ENST00000534553 K7EMT4 169 aa10.29□□□□□ -0.76
BEST1-208ENST00000534553 CA1P00915 261 aaPredicted RBP10.29□□□□□ -0.76
BEST1-208ENST00000534553 CBLN1P23435 193 aa10.29□□□□□ -0.76
BEST1-208ENST00000534553 BMI1P35226 326 aa10.29□□□□□ -0.76
BEST1-208ENST00000534553 FOXE3Q13461 319 aa10.29□□□□□ -0.76
BEST1-208ENST00000534553 SAMD13Q5VXD3 122 aa10.29□□□□□ -0.76
BEST1-208ENST00000534553 LCN12Q6JVE5 192 aa10.29□□□□□ -0.76
BEST1-208ENST00000534553 GLMPQ8WWB7 406 aa10.29□□□□□ -0.76
BEST1-208ENST00000534553 HOXA3O43365 443 aaPredicted RBP10.28□□□□□ -0.76
BEST1-208ENST00000534553 FOXA3P55318 350 aaPredicted RBP10.28□□□□□ -0.76
BEST1-208ENST00000534553 FAM106AQ4KMX7 169 aa10.28□□□□□ -0.76
BEST1-208ENST00000534553 TMEM136Q6ZRR5 245 aa10.28□□□□□ -0.76
BEST1-208ENST00000534553 RBPMS2Q6ZRY4 209 aaKnown RBP10.28□□□□□ -0.76
BEST1-208ENST00000534553 ZC2HC1AQ96GY0 325 aa10.28□□□□□ -0.76
BEST1-208ENST00000534553 DAZ1Q9NQZ3 744 aaKnown RBP10.28□□□□□ -0.76
BEST1-208ENST00000534553 ABCA12Q86UK0 2595 aa10.28□□□□□ -0.76
BEST1-208ENST00000534553 IGHV3-11P01762 117 aa10.28□□□□□ -0.76
BEST1-208ENST00000534553 LINC00322Q6ZN03 302 aaPredicted RBP10.28□□□□□ -0.76
BEST1-208ENST00000534553 C8orf86Q6ZUL3 223 aa10.28□□□□□ -0.76
BEST1-208ENST00000534553 GPHB5Q86YW7 130 aa10.28□□□□□ -0.76
BEST1-208ENST00000534553 Q8N2B8 174 aa10.28□□□□□ -0.76
BEST1-208ENST00000534553 WFDC11Q8NEX6 87 aa10.28□□□□□ -0.76
BEST1-208ENST00000534553 C12orf57Q99622 126 aa10.28□□□□□ -0.76
BEST1-208ENST00000534553 TRBV12-3P01733 135 aa10.27□□□□□ -0.77
BEST1-208ENST00000534553 MRPL54Q6P161 138 aaKnown RBP10.27□□□□□ -0.77
BEST1-208ENST00000534553 RNF152Q8N8N0 203 aa10.27□□□□□ -0.77
BEST1-208ENST00000534553 OR2D3Q8NGH3 330 aa10.27□□□□□ -0.77
BEST1-208ENST00000534553 PRR25Q96S07 402 aa10.27□□□□□ -0.77
BEST1-208ENST00000534553 ZNF702PQ9H963 129 aa10.27□□□□□ -0.77
BEST1-208ENST00000534553 UFC1Q9Y3C8 167 aa10.27□□□□□ -0.77
BEST1-208ENST00000534553 CSPG4Q6UVK1 2322 aa10.27□□□□□ -0.77
BEST1-208ENST00000534553 APCP25054 2843 aa10.27□□□□□ -0.77
BEST1-208ENST00000534553 A0A1B0GW15 77 aa10.26□□□□□ -0.77
BEST1-208ENST00000534553 APOHP02749 345 aaPredicted RBP10.26□□□□□ -0.77
BEST1-208ENST00000534553 CRISP2P16562 243 aa10.26□□□□□ -0.77
BEST1-208ENST00000534553 RAB4BP61018 213 aa10.26□□□□□ -0.77
BEST1-208ENST00000534553 HBBP68871 147 aa10.26□□□□□ -0.77
BEST1-208ENST00000534553 SCGB2A2Q13296 93 aa10.26□□□□□ -0.77
BEST1-208ENST00000534553 FAM162BQ5T6X4 162 aa10.26□□□□□ -0.77
BEST1-208ENST00000534553 UNQ9165/PRO28630Q6UXU0 137 aa10.26□□□□□ -0.77
BEST1-208ENST00000534553 GPR61Q9BZJ8 451 aa10.26□□□□□ -0.77
BEST1-208ENST00000534553 IGKV2-40A0A087WW87 121 aaPredicted RBP10.26□□□□□ -0.77
BEST1-208ENST00000534553 IGHV7-4-1A0A0J9YVY3 117 aa10.26□□□□□ -0.77
BEST1-208ENST00000534553 A0A1B0GXF2 115 aa10.26□□□□□ -0.77
BEST1-208ENST00000534553 ZNF207O43670 478 aaKnown RBP10.26□□□□□ -0.77
BEST1-208ENST00000534553 IGKV2D-40P01614 121 aaPredicted RBP10.26□□□□□ -0.77
BEST1-208ENST00000534553 RPS20P60866 119 aaKnown RBP10.26□□□□□ -0.77
BEST1-208ENST00000534553 SRSF2Q01130 221 aaKnown RBP10.26□□□□□ -0.77
BEST1-208ENST00000534553 Q0VG73 95 aa10.26□□□□□ -0.77
BEST1-208ENST00000534553 OR10J3Q5JRS4 329 aa10.26□□□□□ -0.77
BEST1-208ENST00000534553 MYOZ3Q8TDC0 251 aa10.26□□□□□ -0.77
BEST1-208ENST00000534553 PPP1R14DQ9NXH3 145 aa10.26□□□□□ -0.77
BEST1-208ENST00000534553 NBPF19A0A087WUL8 3843 aa10.25□□□□□ -0.77
BEST1-208ENST00000534553 TENM4Q6N022 2769 aa10.25□□□□□ -0.77
BEST1-208ENST00000534553 CELSR1Q9NYQ6 3014 aa10.25□□□□□ -0.77
BEST1-208ENST00000534553 IGHV3-66A0A0C4DH42 116 aa10.25□□□□□ -0.77
BEST1-208ENST00000534553 IFITM10A6NMD0 228 aa10.25□□□□□ -0.77
BEST1-208ENST00000534553 SPINK4O60575 86 aa10.25□□□□□ -0.77
BEST1-208ENST00000534553 APCSP02743 223 aa10.25□□□□□ -0.77
BEST1-208ENST00000534553 TMEM95Q3KNT9 176 aa10.25□□□□□ -0.77
BEST1-208ENST00000534553 TMEM18Q96B42 140 aa10.25□□□□□ -0.77
BEST1-208ENST00000534553 C16orf92Q96LL3 132 aa10.25□□□□□ -0.77
BEST1-208ENST00000534553 UBE2E2Q96LR5 201 aa10.25□□□□□ -0.77
BEST1-208ENST00000534553 HELZ2Q9BYK8 2649 aaKnown RBP10.24□□□□□ -0.77
BEST1-208ENST00000534553 MAP1AP78559 2803 aaPredicted RBP10.24□□□□□ -0.77
BEST1-208ENST00000534553 GFI1BQ5VTD9 330 aa10.24□□□□□ -0.77
BEST1-208ENST00000534553 GTSF1Q8WW33 167 aa10.24□□□□□ -0.77
BEST1-208ENST00000534553 HIST1H2BLQ99880 126 aa10.24□□□□□ -0.77
BEST1-208ENST00000534553 LENEPQ9Y5L5 61 aa10.24□□□□□ -0.77
BEST1-208ENST00000534553 IGHV3OR16-13A0A075B7E8 117 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 IGHV3-74A0A0B4J1X5 117 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 CD5LO43866 347 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 LGALS1P09382 135 aaKnown RBP10.23□□□□□ -0.77
BEST1-208ENST00000534553 FABP4P15090 132 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 TMEM78Q5T7P6 136 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 TCF24Q7RTU0 167 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 SIGLECL1Q8N7X8 197 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 BORCS7Q96B45 105 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 PACRGQ96M98 296 aaPredicted RBP10.23□□□□□ -0.77
BEST1-208ENST00000534553 NRN1Q9NPD7 142 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 DOPEY2Q9Y3R5 2298 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 IGHV3-49A0A0A0MS15 119 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 TRAV8-2A0A0B4J237 113 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 A8MWP6 167 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 HAX1O00165 279 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 ESDP10768 282 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 PDZD11Q5EBL8 140 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 DNLZQ5SXM8 178 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 C9orf47Q6ZRZ4 202 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 VGLL1Q99990 258 aa10.23□□□□□ -0.77
BEST1-208ENST00000534553 RHPN1-AS1Q9BWJ2 59 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms