RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 IGLC2P0DOY2 106 aa13.52□□□□□ -0.25
LRRK1-210ENST00000534045 TAS2R60P59551 318 aa13.52□□□□□ -0.25
LRRK1-210ENST00000534045 IFITM3Q01628 133 aa13.52□□□□□ -0.25
LRRK1-210ENST00000534045 UBE2DNLQ8IWF7 75 aa13.52□□□□□ -0.25
LRRK1-210ENST00000534045 EPPK1P58107 5090 aaKnown RBP13.51□□□□□ -0.25
LRRK1-210ENST00000534045 SLC17A3O00476 420 aa13.51□□□□□ -0.25
LRRK1-210ENST00000534045 DEFB130BP0DP73 79 aa13.51□□□□□ -0.25
LRRK1-210ENST00000534045 DEFB130AP0DP74 79 aa13.51□□□□□ -0.25
LRRK1-210ENST00000534045 POM121L12Q8N7R1 296 aa13.51□□□□□ -0.25
LRRK1-210ENST00000534045 THAP6Q8TBB0 222 aa13.51□□□□□ -0.25
LRRK1-210ENST00000534045 SAT2Q96F10 170 aaPredicted RBP13.51□□□□□ -0.25
LRRK1-210ENST00000534045 NPCDR1Q9BY65 106 aa13.51□□□□□ -0.25
LRRK1-210ENST00000534045 CLINT1Q14677 625 aa13.5□□□□□ -0.25
LRRK1-210ENST00000534045 CCDC28AQ8IWP9 274 aa13.5□□□□□ -0.25
LRRK1-210ENST00000534045 MARVELD1Q9BSK0 173 aa13.5□□□□□ -0.25
LRRK1-210ENST00000534045 BATF3Q9NR55 127 aa13.5□□□□□ -0.25
LRRK1-210ENST00000534045 KCNIP2Q9NS61 270 aa13.5□□□□□ -0.25
LRRK1-210ENST00000534045 OR5AC2Q9NZP5 309 aa13.5□□□□□ -0.25
LRRK1-210ENST00000534045 C17orf112F2Z3M2 114 aa13.49□□□□□ -0.25
LRRK1-210ENST00000534045 H7BYZ3 331 aa13.49□□□□□ -0.25
LRRK1-210ENST00000534045 PET100P0DJ07 73 aa13.49□□□□□ -0.25
LRRK1-210ENST00000534045 HIST1H1EP10412 219 aaKnown RBP13.49□□□□□ -0.25
LRRK1-210ENST00000534045 AZU1P20160 251 aa13.49□□□□□ -0.25
LRRK1-210ENST00000534045 C16orf74Q96GX8 76 aa13.49□□□□□ -0.25
LRRK1-210ENST00000534045 C20orf144Q9BQM9 153 aa13.49□□□□□ -0.25
LRRK1-210ENST00000534045 AAMDCQ9H7C9 122 aa13.49□□□□□ -0.25
LRRK1-210ENST00000534045 ZNF586Q9NXT0 402 aa13.49□□□□□ -0.25
LRRK1-210ENST00000534045 PRAC2D3DTV9 90 aa13.48□□□□□ -0.25
LRRK1-210ENST00000534045 J3KRW8 73 aa13.48□□□□□ -0.25
LRRK1-210ENST00000534045 ZNF253O75346 499 aa13.48□□□□□ -0.25
LRRK1-210ENST00000534045 LEPP41159 167 aa13.48□□□□□ -0.25
LRRK1-210ENST00000534045 ZNF493Q6ZR52 646 aa13.48□□□□□ -0.25
LRRK1-210ENST00000534045 BLNKQ8WV28 456 aa13.48□□□□□ -0.25
LRRK1-210ENST00000534045 PPP1R1CQ8WVI7 109 aa13.48□□□□□ -0.25
LRRK1-210ENST00000534045 TMEM14CQ9P0S9 112 aa13.48□□□□□ -0.25
LRRK1-210ENST00000534045 TIMM8BQ9Y5J9 83 aaPredicted RBP13.48□□□□□ -0.25
LRRK1-210ENST00000534045 TRBV19A0A075B6N1 114 aa13.47□□□□□ -0.25
LRRK1-210ENST00000534045 FCN2Q15485 313 aa13.47□□□□□ -0.25
LRRK1-210ENST00000534045 PRELID1Q9Y255 219 aa13.47□□□□□ -0.25
LRRK1-210ENST00000534045 GCSAMLQ5JQS6 135 aa13.46□□□□□ -0.25
LRRK1-210ENST00000534045 TMEM88Q6PEY1 159 aa13.46□□□□□ -0.25
LRRK1-210ENST00000534045 SCGB1C1Q8TD33 95 aa13.46□□□□□ -0.25
LRRK1-210ENST00000534045 PARD6GQ9BYG4 376 aaPredicted RBP13.46□□□□□ -0.25
LRRK1-210ENST00000534045 WDR61Q9GZS3 305 aaKnown RBP13.46□□□□□ -0.25
LRRK1-210ENST00000534045 F5H768 121 aa13.45□□□□□ -0.26
LRRK1-210ENST00000534045 H0YIZ8 118 aa13.45□□□□□ -0.26
LRRK1-210ENST00000534045 IFNA5P01569 189 aa13.45□□□□□ -0.26
LRRK1-210ENST00000534045 ATP5G1P05496 136 aa13.45□□□□□ -0.26
LRRK1-210ENST00000534045 PYYP10082 97 aa13.45□□□□□ -0.26
LRRK1-210ENST00000534045 ATP5G3P48201 142 aa13.45□□□□□ -0.26
LRRK1-210ENST00000534045 H2BFSP57053 126 aa13.45□□□□□ -0.26
LRRK1-210ENST00000534045 PDE6HQ13956 83 aa13.45□□□□□ -0.26
LRRK1-210ENST00000534045 MRPL53Q96EL3 112 aaKnown RBP13.45□□□□□ -0.26
LRRK1-210ENST00000534045 CBY3A6NI87 242 aa13.44□□□□□ -0.26
LRRK1-210ENST00000534045 CT45A10P0DMU9 189 aa13.44□□□□□ -0.26
LRRK1-210ENST00000534045 GFI1BQ5VTD9 330 aa13.44□□□□□ -0.26
LRRK1-210ENST00000534045 C15orf53Q8NAA6 179 aa13.44□□□□□ -0.26
LRRK1-210ENST00000534045 TMEM263Q8WUH6 116 aaKnown RBP13.44□□□□□ -0.26
LRRK1-210ENST00000534045 ODF3Q96PU9 254 aa13.44□□□□□ -0.26
LRRK1-210ENST00000534045 OR51M1Q9H341 326 aa13.44□□□□□ -0.26
LRRK1-210ENST00000534045 NOP10Q9NPE3 64 aaKnown RBP13.44□□□□□ -0.26
LRRK1-210ENST00000534045 TRAV12-3A0A0B4J271 114 aa13.43□□□□□ -0.26
LRRK1-210ENST00000534045 SNURFLB1AK76 121 aa13.43□□□□□ -0.26
LRRK1-210ENST00000534045 NPIPB6E9PJ23 425 aa13.43□□□□□ -0.26
LRRK1-210ENST00000534045 M0R2N4 97 aa13.43□□□□□ -0.26
LRRK1-210ENST00000534045 M0R3E3 92 aa13.43□□□□□ -0.26
LRRK1-210ENST00000534045 MPC2O95563 127 aa13.43□□□□□ -0.26
LRRK1-210ENST00000534045 NBEAP1P0C6P0 100 aa13.43□□□□□ -0.26
LRRK1-210ENST00000534045 KIR3DS1Q14943 382 aa13.43□□□□□ -0.26
LRRK1-210ENST00000534045 MIR17HGQ75NE6 70 aa13.43□□□□□ -0.26
LRRK1-210ENST00000534045 LINC00477Q96M19 166 aa13.43□□□□□ -0.26
LRRK1-210ENST00000534045 ATP5SQ99766 215 aa13.43□□□□□ -0.26
LRRK1-210ENST00000534045 ATG101Q9BSB4 218 aa13.43□□□□□ -0.26
LRRK1-210ENST00000534045 MRPL32Q9BYC8 188 aaKnown RBP13.43□□□□□ -0.26
LRRK1-210ENST00000534045 RPL12P30050 165 aaKnown RBP13.42□□□□□ -0.26
LRRK1-210ENST00000534045 ICAM4Q14773 271 aa13.42□□□□□ -0.26
LRRK1-210ENST00000534045 RNF212Q495C1 297 aa13.42□□□□□ -0.26
LRRK1-210ENST00000534045 EXOC3-AS1Q8N2X6 119 aa13.42□□□□□ -0.26
LRRK1-210ENST00000534045 PAXXQ9BUH6 204 aa13.42□□□□□ -0.26
LRRK1-210ENST00000534045 SLC25A2Q9BXI2 301 aa13.42□□□□□ -0.26
LRRK1-210ENST00000534045 NDUFB4O95168 129 aa13.41□□□□□ -0.26
LRRK1-210ENST00000534045 SLC25A5P05141 298 aaKnown RBP13.41□□□□□ -0.26
LRRK1-210ENST00000534045 ERCC8Q13216 396 aa13.41□□□□□ -0.26
LRRK1-210ENST00000534045 TMEM78Q5T7P6 136 aa13.41□□□□□ -0.26
LRRK1-210ENST00000534045 FAM122CQ6P4D5 195 aa13.41□□□□□ -0.26
LRRK1-210ENST00000534045 RNF141Q8WVD5 230 aa13.41□□□□□ -0.26
LRRK1-210ENST00000534045 PYGO2Q9BRQ0 406 aa13.41□□□□□ -0.26
LRRK1-210ENST00000534045 SMIM3Q9BZL3 60 aa13.41□□□□□ -0.26
LRRK1-210ENST00000534045 FUT9Q9Y231 359 aa13.41□□□□□ -0.26
LRRK1-210ENST00000534045 HSPB11Q9Y547 144 aa13.41□□□□□ -0.26
LRRK1-210ENST00000534045 PLAC8L1A1L4L8 177 aa13.4□□□□□ -0.26
LRRK1-210ENST00000534045 OR7C2O60412 319 aa13.4□□□□□ -0.26
LRRK1-210ENST00000534045 NUDT3O95989 172 aa13.4□□□□□ -0.26
LRRK1-210ENST00000534045 CSN1S1P47710 185 aa13.4□□□□□ -0.26
LRRK1-210ENST00000534045 FFAR4Q5NUL3 377 aa13.4□□□□□ -0.26
LRRK1-210ENST00000534045 RNASE8Q8TDE3 154 aaKnown RBP13.4□□□□□ -0.26
LRRK1-210ENST00000534045 BIRC6Q9NR09 4857 aa13.4□□□□□ -0.26
LRRK1-210ENST00000534045 GPX1P07203 203 aa13.39□□□□□ -0.27
LRRK1-210ENST00000534045 OR10J4P0C629 311 aa13.39□□□□□ -0.27
LRRK1-210ENST00000534045 LINC00336Q6ZUF6 198 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms