RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 RBMY1CP0DJD4 496 aa9.68□□□□□ -0.86
CAPN1-227ENST00000533909 TSPOP30536 169 aa9.68□□□□□ -0.86
CAPN1-227ENST00000533909 UBE2L3P68036 154 aaKnown RBP9.68□□□□□ -0.86
CAPN1-227ENST00000533909 RBMY1FQ15415 496 aaKnown RBP9.68□□□□□ -0.86
CAPN1-227ENST00000533909 KHDC3LQ587J8 217 aa9.68□□□□□ -0.86
CAPN1-227ENST00000533909 CEMP1Q6PRD7 247 aaPredicted RBP9.68□□□□□ -0.86
CAPN1-227ENST00000533909 AMTNQ6UX39 209 aa9.68□□□□□ -0.86
CAPN1-227ENST00000533909 HSD17B11Q8NBQ5 300 aa9.68□□□□□ -0.86
CAPN1-227ENST00000533909 RNF141Q8WVD5 230 aa9.68□□□□□ -0.86
CAPN1-227ENST00000533909 SAT2Q96F10 170 aaPredicted RBP9.68□□□□□ -0.86
CAPN1-227ENST00000533909 NEU1Q99519 415 aa9.68□□□□□ -0.86
CAPN1-227ENST00000533909 CSMD3Q7Z407 3707 aa9.68□□□□□ -0.86
CAPN1-227ENST00000533909 BORCS7-ASMTA0A0B4J1R7 106 aa9.67□□□□□ -0.86
CAPN1-227ENST00000533909 RRN3P1Q2M238 152 aa9.67□□□□□ -0.86
CAPN1-227ENST00000533909 Q5BKY6 102 aa9.67□□□□□ -0.86
CAPN1-227ENST00000533909 BAP18Q8IXM2 172 aa9.67□□□□□ -0.86
CAPN1-227ENST00000533909 MRPL53Q96EL3 112 aaKnown RBP9.67□□□□□ -0.86
CAPN1-227ENST00000533909 FAM167A-AS1Q96KT0 104 aa9.67□□□□□ -0.86
CAPN1-227ENST00000533909 TRAV12-2A0A075B6T6 113 aa9.66□□□□□ -0.86
CAPN1-227ENST00000533909 LOC102723971A0A1B0GUV8 181 aa9.66□□□□□ -0.86
CAPN1-227ENST00000533909 PRAC2D3DTV9 90 aa9.66□□□□□ -0.86
CAPN1-227ENST00000533909 M6PRP20645 277 aa9.66□□□□□ -0.86
CAPN1-227ENST00000533909 CDKN1BP46527 198 aa9.66□□□□□ -0.86
CAPN1-227ENST00000533909 FAM122CQ6P4D5 195 aa9.66□□□□□ -0.86
CAPN1-227ENST00000533909 EXOC3-AS1Q8N2X6 119 aa9.66□□□□□ -0.86
CAPN1-227ENST00000533909 OR10G4Q8NGN3 311 aa9.66□□□□□ -0.86
CAPN1-227ENST00000533909 OR10G9Q8NGN4 311 aa9.66□□□□□ -0.86
CAPN1-227ENST00000533909 OR10G7Q8NGN6 311 aa9.66□□□□□ -0.86
CAPN1-227ENST00000533909 LCE6AA0A183 80 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 TEX48A0A1B0GUV7 120 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 C11orf94C9JXX5 98 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 M0R3E3 92 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 ARPC5O15511 151 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 NDUFB4O95168 129 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 MBP02144 154 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 SPART-AS1P0CW21 52 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 HTN1P15515 57 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 LEPP41159 167 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 CSN1S1P47710 185 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 RAB2AP61019 212 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 ICAM4Q14773 271 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 C1orf158Q8N1D5 194 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 TMEM256Q8N2U0 113 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 RPP25LQ8N5L8 163 aaKnown RBP9.65□□□□□ -0.86
CAPN1-227ENST00000533909 LINC01587Q99440 93 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 TNFSF18Q9UNG2 199 aa9.65□□□□□ -0.86
CAPN1-227ENST00000533909 KMT2CQ8NEZ4 4911 aaKnown RBP9.65□□□□□ -0.87
CAPN1-227ENST00000533909 NPIPB6E9PJ23 425 aa9.64□□□□□ -0.87
CAPN1-227ENST00000533909 RANP62826 216 aaKnown RBP9.64□□□□□ -0.87
CAPN1-227ENST00000533909 TMEM78Q5T7P6 136 aa9.64□□□□□ -0.87
CAPN1-227ENST00000533909 C2CD4CQ8TF44 421 aa9.64□□□□□ -0.87
CAPN1-227ENST00000533909 FXYD5Q96DB9 178 aa9.64□□□□□ -0.87
CAPN1-227ENST00000533909 GNPNAT1Q96EK6 184 aaPredicted RBP9.64□□□□□ -0.87
CAPN1-227ENST00000533909 PSMG3Q9BT73 122 aaPredicted RBP9.64□□□□□ -0.87
CAPN1-227ENST00000533909 TRAV10A0A0B4J240 114 aa9.63□□□□□ -0.87
CAPN1-227ENST00000533909 J3KRW8 73 aa9.63□□□□□ -0.87
CAPN1-227ENST00000533909 CRXO43186 299 aaPredicted RBP9.63□□□□□ -0.87
CAPN1-227ENST00000533909 ATP6V0CP27449 155 aa9.63□□□□□ -0.87
CAPN1-227ENST00000533909 SERF2P84101 59 aa9.63□□□□□ -0.87
CAPN1-227ENST00000533909 FAM74A1Q5RGS3 127 aa9.63□□□□□ -0.87
CAPN1-227ENST00000533909 RPL7L1Q6DKI1 246 aaKnown RBP9.63□□□□□ -0.87
CAPN1-227ENST00000533909 PQLC2Q6ZP29 291 aa9.63□□□□□ -0.87
CAPN1-227ENST00000533909 OR2G3Q8NGZ4 309 aa9.63□□□□□ -0.87
CAPN1-227ENST00000533909 PHYHIPLQ96FC7 376 aa9.63□□□□□ -0.87
CAPN1-227ENST00000533909 STARD9Q9P2P6 4700 aa9.62□□□□□ -0.87
CAPN1-227ENST00000533909 RNF222A6NCQ9 220 aa9.62□□□□□ -0.87
CAPN1-227ENST00000533909 ZNF705GA8MUZ8 300 aaPredicted RBP9.62□□□□□ -0.87
CAPN1-227ENST00000533909 TAAR5O14804 337 aa9.62□□□□□ -0.87
CAPN1-227ENST00000533909 HMGB3O15347 200 aaKnown RBP9.62□□□□□ -0.87
CAPN1-227ENST00000533909 CT45A10P0DMU9 189 aa9.62□□□□□ -0.87
CAPN1-227ENST00000533909 CDC34P49427 236 aaPredicted RBP9.62□□□□□ -0.87
CAPN1-227ENST00000533909 Q6ZTC4 211 aa9.62□□□□□ -0.87
CAPN1-227ENST00000533909 ZNF767PQ75MW2 155 aa9.62□□□□□ -0.87
CAPN1-227ENST00000533909 LYPD1Q8N2G4 141 aa9.62□□□□□ -0.87
CAPN1-227ENST00000533909 CMTM2Q8TAZ6 248 aa9.62□□□□□ -0.87
CAPN1-227ENST00000533909 HYLS1Q96M11 299 aa9.62□□□□□ -0.87
CAPN1-227ENST00000533909 LINC00477Q96M19 166 aa9.62□□□□□ -0.87
CAPN1-227ENST00000533909 ODF3Q96PU9 254 aa9.62□□□□□ -0.87
CAPN1-227ENST00000533909 NIPSNAP3BQ9BS92 247 aa9.62□□□□□ -0.87
CAPN1-227ENST00000533909 Q9H3A6 140 aa9.62□□□□□ -0.87
CAPN1-227ENST00000533909 CELA1Q9UNI1 258 aa9.62□□□□□ -0.87
CAPN1-227ENST00000533909 YTHDF2Q9Y5A9 579 aaKnown RBP9.62□□□□□ -0.87
CAPN1-227ENST00000533909 IGKV2-40A0A087WW87 121 aaPredicted RBP9.61□□□□□ -0.87
CAPN1-227ENST00000533909 IGLL5B9A064 214 aa9.61□□□□□ -0.87
CAPN1-227ENST00000533909 SMLR1H3BR10 107 aa9.61□□□□□ -0.87
CAPN1-227ENST00000533909 H7BYZ3 331 aa9.61□□□□□ -0.87
CAPN1-227ENST00000533909 EIF3GO75821 320 aaKnown RBP eCLIP9.61□□□□□ -0.87
CAPN1-227ENST00000533909 IGKV2D-40P01614 121 aaPredicted RBP9.61□□□□□ -0.87
CAPN1-227ENST00000533909 TAS2R60P59551 318 aa9.61□□□□□ -0.87
CAPN1-227ENST00000533909 ERCC8Q13216 396 aa9.61□□□□□ -0.87
CAPN1-227ENST00000533909 FAM222AQ5U5X8 452 aa9.61□□□□□ -0.87
CAPN1-227ENST00000533909 CCDC28AQ8IWP9 274 aa9.61□□□□□ -0.87
CAPN1-227ENST00000533909 IQCF2Q8IXL9 164 aa9.61□□□□□ -0.87
CAPN1-227ENST00000533909 RXFP4Q8TDU9 374 aa9.61□□□□□ -0.87
CAPN1-227ENST00000533909 C20orf144Q9BQM9 153 aa9.61□□□□□ -0.87
CAPN1-227ENST00000533909 ACTR3CQ9C0K3 210 aaPredicted RBP9.61□□□□□ -0.87
CAPN1-227ENST00000533909 SH3BGRL3Q9H299 93 aa9.61□□□□□ -0.87
CAPN1-227ENST00000533909 DEFB131BA0A096LNP1 70 aa9.6□□□□□ -0.87
CAPN1-227ENST00000533909 C12orf74Q32Q52 190 aa9.6□□□□□ -0.87
CAPN1-227ENST00000533909 GFI1BQ5VTD9 330 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms