RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 ACOT6Q3I5F7 207 aaPredicted RBP11.43□□□□□ -0.58
TSKU-204ENST00000533752 KHDC3LQ587J8 217 aa11.43□□□□□ -0.58
TSKU-204ENST00000533752 PHLDA1Q8WV24 401 aaPredicted RBP11.43□□□□□ -0.58
TSKU-204ENST00000533752 PAXXQ9BUH6 204 aa11.43□□□□□ -0.58
TSKU-204ENST00000533752 OR51M1Q9H341 326 aa11.43□□□□□ -0.58
TSKU-204ENST00000533752 FXYD6-FXYD2A0A087WZ82 144 aa11.42□□□□□ -0.58
TSKU-204ENST00000533752 C11orf94C9JXX5 98 aa11.42□□□□□ -0.58
TSKU-204ENST00000533752 M0R2Z0 102 aa11.42□□□□□ -0.58
TSKU-204ENST00000533752 OR7C2O60412 319 aa11.42□□□□□ -0.58
TSKU-204ENST00000533752 TSPOP30536 169 aa11.42□□□□□ -0.58
TSKU-204ENST00000533752 BLNKQ8WV28 456 aa11.42□□□□□ -0.58
TSKU-204ENST00000533752 NDUFB4O95168 129 aa11.41□□□□□ -0.58
TSKU-204ENST00000533752 NBEAP1P0C6P0 100 aa11.41□□□□□ -0.58
TSKU-204ENST00000533752 M6PRP20645 277 aa11.41□□□□□ -0.58
TSKU-204ENST00000533752 CDKN1BP46527 198 aa11.41□□□□□ -0.58
TSKU-204ENST00000533752 RRN3P1Q2M238 152 aa11.41□□□□□ -0.58
TSKU-204ENST00000533752 C1orf158Q8N1D5 194 aa11.41□□□□□ -0.58
TSKU-204ENST00000533752 TMEM256Q8N2U0 113 aa11.41□□□□□ -0.58
TSKU-204ENST00000533752 RNF141Q8WVD5 230 aa11.41□□□□□ -0.58
TSKU-204ENST00000533752 ODF3Q96PU9 254 aa11.41□□□□□ -0.58
TSKU-204ENST00000533752 PSMG3Q9BT73 122 aaPredicted RBP11.41□□□□□ -0.58
TSKU-204ENST00000533752 CRXO43186 299 aaPredicted RBP11.4□□□□□ -0.58
TSKU-204ENST00000533752 UBE2L3P68036 154 aaKnown RBP11.4□□□□□ -0.58
TSKU-204ENST00000533752 Q5BKY6 102 aa11.4□□□□□ -0.58
TSKU-204ENST00000533752 BAP18Q8IXM2 172 aa11.4□□□□□ -0.58
TSKU-204ENST00000533752 OR2G3Q8NGZ4 309 aa11.4□□□□□ -0.58
TSKU-204ENST00000533752 FXYD5Q96DB9 178 aa11.4□□□□□ -0.58
TSKU-204ENST00000533752 TNFSF18Q9UNG2 199 aa11.4□□□□□ -0.58
TSKU-204ENST00000533752 BORCS7-ASMTA0A0B4J1R7 106 aa11.39□□□□□ -0.59
TSKU-204ENST00000533752 A0A1W2PPV4 95 aa11.39□□□□□ -0.59
TSKU-204ENST00000533752 PRAC2D3DTV9 90 aa11.39□□□□□ -0.59
TSKU-204ENST00000533752 NPIPB6E9PJ23 425 aa11.39□□□□□ -0.59
TSKU-204ENST00000533752 OR10J4P0C629 311 aa11.39□□□□□ -0.59
TSKU-204ENST00000533752 LEPP41159 167 aa11.39□□□□□ -0.59
TSKU-204ENST00000533752 LYPD1Q8N2G4 141 aa11.39□□□□□ -0.59
TSKU-204ENST00000533752 HSD17B11Q8NBQ5 300 aa11.39□□□□□ -0.59
TSKU-204ENST00000533752 C20orf144Q9BQM9 153 aa11.39□□□□□ -0.59
TSKU-204ENST00000533752 DYNC2H1Q8NCM8 4307 aaKnown RBP11.38□□□□□ -0.59
TSKU-204ENST00000533752 TRAV12-2A0A075B6T6 113 aa11.38□□□□□ -0.59
TSKU-204ENST00000533752 LOC102723971A0A1B0GUV8 181 aa11.38□□□□□ -0.59
TSKU-204ENST00000533752 RNF222A6NCQ9 220 aa11.38□□□□□ -0.59
TSKU-204ENST00000533752 M0R3E3 92 aa11.38□□□□□ -0.59
TSKU-204ENST00000533752 MBP02144 154 aa11.38□□□□□ -0.59
TSKU-204ENST00000533752 SPART-AS1P0CW21 52 aa11.38□□□□□ -0.59
TSKU-204ENST00000533752 SERF2P84101 59 aa11.38□□□□□ -0.59
TSKU-204ENST00000533752 PQLC2Q6ZP29 291 aa11.38□□□□□ -0.59
TSKU-204ENST00000533752 EXOC3-AS1Q8N2X6 119 aa11.38□□□□□ -0.59
TSKU-204ENST00000533752 RPP25LQ8N5L8 163 aaKnown RBP11.38□□□□□ -0.59
TSKU-204ENST00000533752 TRAV10A0A0B4J240 114 aa11.37□□□□□ -0.59
TSKU-204ENST00000533752 EMP1P54849 157 aa11.37□□□□□ -0.59
TSKU-204ENST00000533752 TCTAP57738 103 aa11.37□□□□□ -0.59
TSKU-204ENST00000533752 RAB2AP61019 212 aa11.37□□□□□ -0.59
TSKU-204ENST00000533752 ICAM4Q14773 271 aa11.37□□□□□ -0.59
TSKU-204ENST00000533752 OR10G4Q8NGN3 311 aa11.37□□□□□ -0.59
TSKU-204ENST00000533752 OR10G9Q8NGN4 311 aa11.37□□□□□ -0.59
TSKU-204ENST00000533752 OR10G7Q8NGN6 311 aa11.37□□□□□ -0.59
TSKU-204ENST00000533752 C2CD4CQ8TF44 421 aa11.37□□□□□ -0.59
TSKU-204ENST00000533752 GNPNAT1Q96EK6 184 aaPredicted RBP11.37□□□□□ -0.59
TSKU-204ENST00000533752 CELA1Q9UNI1 258 aa11.37□□□□□ -0.59
TSKU-204ENST00000533752 H7BYZ3 331 aa11.36□□□□□ -0.59
TSKU-204ENST00000533752 TAAR5O14804 337 aa11.36□□□□□ -0.59
TSKU-204ENST00000533752 PRB4P10163 310 aaPredicted RBP11.36□□□□□ -0.59
TSKU-204ENST00000533752 ATP6V0CP27449 155 aa11.36□□□□□ -0.59
TSKU-204ENST00000533752 CSN1S1P47710 185 aa11.36□□□□□ -0.59
TSKU-204ENST00000533752 TAS2R60P59551 318 aa11.36□□□□□ -0.59
TSKU-204ENST00000533752 FAM122CQ6P4D5 195 aa11.36□□□□□ -0.59
TSKU-204ENST00000533752 Q6ZTC4 211 aa11.36□□□□□ -0.59
TSKU-204ENST00000533752 ZNF503Q96F45 646 aa11.36□□□□□ -0.59
TSKU-204ENST00000533752 PHYHIPLQ96FC7 376 aa11.36□□□□□ -0.59
TSKU-204ENST00000533752 LINC00477Q96M19 166 aa11.36□□□□□ -0.59
TSKU-204ENST00000533752 LINC01587Q99440 93 aa11.36□□□□□ -0.59
TSKU-204ENST00000533752 G3V3Q6 166 aa11.35□□□□□ -0.59
TSKU-204ENST00000533752 ARPC5O15511 151 aa11.35□□□□□ -0.59
TSKU-204ENST00000533752 CT45A10P0DMU9 189 aa11.35□□□□□ -0.59
TSKU-204ENST00000533752 CDC34P49427 236 aaPredicted RBP11.35□□□□□ -0.59
TSKU-204ENST00000533752 C9orf47Q6ZRZ4 202 aa11.35□□□□□ -0.59
TSKU-204ENST00000533752 DKK2Q9UBU2 259 aa11.35□□□□□ -0.59
TSKU-204ENST00000533752 YTHDF2Q9Y5A9 579 aaKnown RBP11.35□□□□□ -0.59
TSKU-204ENST00000533752 LYSTQ99698 3801 aa11.34□□□□□ -0.59
TSKU-204ENST00000533752 ZNF705GA8MUZ8 300 aaPredicted RBP11.34□□□□□ -0.59
TSKU-204ENST00000533752 SLC25A5P05141 298 aaKnown RBP11.34□□□□□ -0.59
TSKU-204ENST00000533752 RANP62826 216 aaKnown RBP11.34□□□□□ -0.59
TSKU-204ENST00000533752 C12orf74Q32Q52 190 aa11.34□□□□□ -0.59
TSKU-204ENST00000533752 FAM74A1Q5RGS3 127 aa11.34□□□□□ -0.59
TSKU-204ENST00000533752 TMEM78Q5T7P6 136 aa11.34□□□□□ -0.59
TSKU-204ENST00000533752 FAM222AQ5U5X8 452 aa11.34□□□□□ -0.59
TSKU-204ENST00000533752 GFI1BQ5VTD9 330 aa11.34□□□□□ -0.59
TSKU-204ENST00000533752 RPL7L1Q6DKI1 246 aaKnown RBP11.34□□□□□ -0.59
TSKU-204ENST00000533752 C16orf74Q96GX8 76 aa11.34□□□□□ -0.59
TSKU-204ENST00000533752 Q9H3A6 140 aa11.34□□□□□ -0.59
TSKU-204ENST00000533752 RBAKDNA6NC62 111 aa11.33□□□□□ -0.6
TSKU-204ENST00000533752 LYRM9A8MSI8 78 aa11.33□□□□□ -0.6
TSKU-204ENST00000533752 NMBP08949 121 aa11.33□□□□□ -0.6
TSKU-204ENST00000533752 ZNF345Q14585 488 aa11.33□□□□□ -0.6
TSKU-204ENST00000533752 ZNF493Q6ZR52 646 aa11.33□□□□□ -0.6
TSKU-204ENST00000533752 RXFP4Q8TDU9 374 aa11.33□□□□□ -0.6
TSKU-204ENST00000533752 LINC00476Q8WZB0 136 aa11.33□□□□□ -0.6
TSKU-204ENST00000533752 NIPSNAP3BQ9BS92 247 aa11.33□□□□□ -0.6
TSKU-204ENST00000533752 SH3BGRL3Q9H299 93 aa11.33□□□□□ -0.6
TSKU-204ENST00000533752 OTORQ9NRC9 128 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms