RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 BUB3O43684 328 aa9.3□□□□□ -0.92
ATM-222ENST00000533733 SH2D1AO60880 128 aa9.3□□□□□ -0.92
ATM-222ENST00000533733 ARMS2P0C7Q2 107 aa9.3□□□□□ -0.92
ATM-222ENST00000533733 GPR183P32249 361 aa9.3□□□□□ -0.92
ATM-222ENST00000533733 PET117Q6UWS5 81 aa9.3□□□□□ -0.92
ATM-222ENST00000533733 C5orf56Q8N8D9 126 aa9.3□□□□□ -0.92
ATM-222ENST00000533733 S4R3C0 116 aa9.3□□□□□ -0.92
ATM-222ENST00000533733 HRNRQ86YZ3 2850 aaPredicted RBP9.3□□□□□ -0.92
ATM-222ENST00000533733 IGHV1-24A0A0C4DH33 117 aa9.29□□□□□ -0.92
ATM-222ENST00000533733 H3BUA1 57 aa9.29□□□□□ -0.92
ATM-222ENST00000533733 RPLP1P05386 114 aaKnown RBP9.29□□□□□ -0.92
ATM-222ENST00000533733 FAM120AOSQ5T036 256 aa9.29□□□□□ -0.92
ATM-222ENST00000533733 EBLN2Q6P2I7 272 aa9.29□□□□□ -0.92
ATM-222ENST00000533733 METTL26Q96S19 204 aa9.29□□□□□ -0.92
ATM-222ENST00000533733 MAP1LC3CQ9BXW4 147 aa9.29□□□□□ -0.92
ATM-222ENST00000533733 TMEM191AQ9H0A3 160 aa9.29□□□□□ -0.92
ATM-222ENST00000533733 MEGF9Q9H1U4 602 aa9.29□□□□□ -0.92
ATM-222ENST00000533733 SMAD5-AS1Q9Y6J3 95 aa9.29□□□□□ -0.92
ATM-222ENST00000533733 CLEC3BP05452 202 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 GNLYP22749 145 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 ATP5G2Q06055 141 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 LCN12Q6JVE5 192 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 C8orf49Q96NF6 230 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 ASCL2Q99929 193 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 AP5S1Q9NUS5 200 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 PPP1R14DQ9NXH3 145 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 SPTBN1Q01082 2364 aaKnown RBP9.28□□□□□ -0.92
ATM-222ENST00000533733 IGHV1-69DA0A0B4J2H0 117 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 FABP5P3A8MUU1 101 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 SYS1-DBNDD2H3BUS1 97 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 IGHV1-69P01742 117 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 IGHV3-23P01764 117 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 IGHV4-39P01824 125 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 FAM104BQ5XKR9 115 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 BCL6BQ8N143 479 aaPredicted RBP9.28□□□□□ -0.92
ATM-222ENST00000533733 ST20Q9HBF5 79 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 MRPS16Q9Y3D3 137 aaKnown RBP9.28□□□□□ -0.92
ATM-222ENST00000533733 U3KQK5 164 aa9.28□□□□□ -0.92
ATM-222ENST00000533733 COL6A6A6NMZ7 2263 aa9.27□□□□□ -0.93
ATM-222ENST00000533733 HNRNPA3P51991 378 aaKnown RBP9.27□□□□□ -0.93
ATM-222ENST00000533733 LYZL1Q6UWQ5 148 aa9.27□□□□□ -0.93
ATM-222ENST00000533733 FA2HQ7L5A8 372 aa9.27□□□□□ -0.93
ATM-222ENST00000533733 OR10AG1Q8NH19 301 aa9.27□□□□□ -0.93
ATM-222ENST00000533733 CCDC140Q96MF4 163 aa9.27□□□□□ -0.93
ATM-222ENST00000533733 CNFNQ9BYD5 112 aa9.27□□□□□ -0.93
ATM-222ENST00000533733 LAMTOR2Q9Y2Q5 125 aa9.27□□□□□ -0.93
ATM-222ENST00000533733 U3KQE9 123 aa9.27□□□□□ -0.93
ATM-222ENST00000533733 IGKV2-40A0A087WW87 121 aaPredicted RBP9.26□□□□□ -0.93
ATM-222ENST00000533733 TRAV41A0A0B4J266 112 aa9.26□□□□□ -0.93
ATM-222ENST00000533733 C19orf84I3L1E1 186 aa9.26□□□□□ -0.93
ATM-222ENST00000533733 TCAPO15273 167 aa9.26□□□□□ -0.93
ATM-222ENST00000533733 IGKV2D-40P01614 121 aaPredicted RBP9.26□□□□□ -0.93
ATM-222ENST00000533733 PPBPP02775 128 aa9.26□□□□□ -0.93
ATM-222ENST00000533733 IGLC6P0CF74 106 aa9.26□□□□□ -0.93
ATM-222ENST00000533733 HIST1H1AQ02539 215 aaPredicted RBP9.26□□□□□ -0.93
ATM-222ENST00000533733 LINC01559Q495D7 138 aa9.26□□□□□ -0.93
ATM-222ENST00000533733 C19orf54Q5BKX5 351 aa9.26□□□□□ -0.93
ATM-222ENST00000533733 COL5A1-AS1Q5SY13 56 aa9.26□□□□□ -0.93
ATM-222ENST00000533733 LCE2DQ5TA82 110 aaPredicted RBP9.26□□□□□ -0.93
ATM-222ENST00000533733 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.26□□□□□ -0.93
ATM-222ENST00000533733 SPATA12Q7Z6I5 190 aa9.26□□□□□ -0.93
ATM-222ENST00000533733 ORMDL3Q8N138 153 aa9.26□□□□□ -0.93
ATM-222ENST00000533733 FER1L6-AS1Q8NA97 138 aa9.26□□□□□ -0.93
ATM-222ENST00000533733 C10orf105Q8TEF2 133 aa9.26□□□□□ -0.93
ATM-222ENST00000533733 OR4C46A6NHA9 309 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 HSBP1L1C9JCN9 74 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 IGHG4P01861 327 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 IGF1P05019 195 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 UQCRFS1P47985 274 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 CLEC2AQ6UVW9 174 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 CLEC19AQ6UXS0 136 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 Q6ZN92 141 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 PRSS3P2Q8NHM4 247 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 USMG5Q96IX5 58 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 CCL19Q99731 98 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 NPFFR1Q9GZQ6 430 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 MS4A6AQ9H2W1 248 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 LENEPQ9Y5L5 61 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 NBASA2RRP1 2371 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 ATRXP46100 2492 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 ZZEF1O43149 2961 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 DSCR9P59020 149 aa9.25□□□□□ -0.93
ATM-222ENST00000533733 LRBAP50851 2863 aa9.24□□□□□ -0.93
ATM-222ENST00000533733 CLPSL1A2RUU4 121 aa9.24□□□□□ -0.93
ATM-222ENST00000533733 C9orf139Q6ZV77 190 aa9.24□□□□□ -0.93
ATM-222ENST00000533733 PRELID3AQ96N28 172 aa9.24□□□□□ -0.93
ATM-222ENST00000533733 VGLL1Q99990 258 aa9.24□□□□□ -0.93
ATM-222ENST00000533733 TPPP3Q9BW30 176 aa9.24□□□□□ -0.93
ATM-222ENST00000533733 ZNF580Q9UK33 172 aa9.24□□□□□ -0.93
ATM-222ENST00000533733 G3V318 75 aa9.23□□□□□ -0.93
ATM-222ENST00000533733 NDUFA4O00483 81 aa9.23□□□□□ -0.93
ATM-222ENST00000533733 GATA3P23771 443 aa9.23□□□□□ -0.93
ATM-222ENST00000533733 GAGE1Q13065 139 aa9.23□□□□□ -0.93
ATM-222ENST00000533733 TMEM78Q5T7P6 136 aa9.23□□□□□ -0.93
ATM-222ENST00000533733 C9orf47Q6ZRZ4 202 aa9.23□□□□□ -0.93
ATM-222ENST00000533733 DPF1Q92782 380 aa9.23□□□□□ -0.93
ATM-222ENST00000533733 RNF224P0DH78 156 aa9.22□□□□□ -0.93
ATM-222ENST00000533733 TSPOP30536 169 aa9.22□□□□□ -0.93
ATM-222ENST00000533733 ZNF138P52744 262 aa9.22□□□□□ -0.93
ATM-222ENST00000533733 PSMG4Q5JS54 123 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms