RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 FUT9Q9Y231 359 aa7.06□□□□□ -1.28
NUP98-220ENST00000533346 NPIPB6E9PJ23 425 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 DEFB4AO15263 64 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 INSP01308 110 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 HBE1P02100 147 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 NMBP08949 121 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 NBEAP1P0C6P0 100 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 ZNF266Q14584 549 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 C12orf74Q32Q52 190 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 MIR17HGQ75NE6 70 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 ARL6IP6Q8N6S5 226 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 OR2G3Q8NGZ4 309 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 C2CD4CQ8TF44 421 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 LINC00476Q8WZB0 136 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 FXYD5Q96DB9 178 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 FAM19A4Q96LR4 140 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 LINC00477Q96M19 166 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 OR51M1Q9H341 326 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 WFDC1Q9HC57 220 aa7.05□□□□□ -1.28
NUP98-220ENST00000533346 TRAV10A0A0B4J240 114 aa7.04□□□□□ -1.28
NUP98-220ENST00000533346 TRBV7-9A0A0J9YWB2 115 aa7.04□□□□□ -1.28
NUP98-220ENST00000533346 SPART-AS1P0CW21 52 aa7.04□□□□□ -1.28
NUP98-220ENST00000533346 FXYD7P58549 80 aa7.04□□□□□ -1.28
NUP98-220ENST00000533346 RHOBP62745 196 aa7.04□□□□□ -1.28
NUP98-220ENST00000533346 SERF2P84101 59 aa7.04□□□□□ -1.28
NUP98-220ENST00000533346 HIST1H1AQ02539 215 aaPredicted RBP7.04□□□□□ -1.28
NUP98-220ENST00000533346 PMS2P11Q13670 270 aa7.04□□□□□ -1.28
NUP98-220ENST00000533346 SPINK13Q1W4C9 94 aa7.04□□□□□ -1.28
NUP98-220ENST00000533346 RRN3P1Q2M238 152 aa7.04□□□□□ -1.28
NUP98-220ENST00000533346 LGALS9CQ6DKI2 356 aa7.04□□□□□ -1.28
NUP98-220ENST00000533346 C9orf47Q6ZRZ4 202 aa7.04□□□□□ -1.28
NUP98-220ENST00000533346 OR10J6PQ8NGY7 276 aa7.04□□□□□ -1.28
NUP98-220ENST00000533346 ZNF503Q96F45 646 aa7.04□□□□□ -1.28
NUP98-220ENST00000533346 PSMG3Q9BT73 122 aaPredicted RBP7.04□□□□□ -1.28
NUP98-220ENST00000533346 PPP1R14DQ9NXH3 145 aa7.04□□□□□ -1.28
NUP98-220ENST00000533346 DKK2Q9UBU2 259 aa7.04□□□□□ -1.28
NUP98-220ENST00000533346 PRAC2D3DTV9 90 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 G3V3Q6 166 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 M0R2Z0 102 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 SLC25A5P05141 298 aaKnown RBP7.03□□□□□ -1.28
NUP98-220ENST00000533346 PYYP10082 97 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 M6PRP20645 277 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 TAS2R45P59539 299 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 TAS2R60P59551 318 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 Q5BKY6 102 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 FFAR4Q5NUL3 377 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 ZNF493Q6ZR52 646 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 RNF141Q8WVD5 230 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 FAM210BQ96KR6 192 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 PAXXQ9BUH6 204 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 AAMDCQ9H7C9 122 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 APLNQ9ULZ1 77 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 TNFSF18Q9UNG2 199 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 CELA1Q9UNI1 258 aa7.03□□□□□ -1.28
NUP98-220ENST00000533346 HERC2O95714 4834 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 VPS13DQ5THJ4 4388 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 LOC102723971A0A1B0GUV8 181 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 PLAC8L1A1L4L8 177 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 RBAKDNA6NC62 111 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 RNF222A6NCQ9 220 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 LYRM9A8MSI8 78 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 KLLNB2CW77 178 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 H3BTX0 84 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 H7BYZ3 331 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 SNRPCP09234 159 aaKnown RBP7.02□□□□□ -1.29
NUP98-220ENST00000533346 CT45A10P0DMU9 189 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 CRISP2P16562 243 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 ACOT6Q3I5F7 207 aaPredicted RBP7.02□□□□□ -1.29
NUP98-220ENST00000533346 KHDC3LQ587J8 217 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 PQLC2Q6ZP29 291 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 Q6ZTC4 211 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 RPP25LQ8N5L8 163 aaKnown RBP7.02□□□□□ -1.29
NUP98-220ENST00000533346 SUN5Q8TC36 379 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 LINC00467Q9BRT7 94 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 SMIM3Q9BZL3 60 aa7.02□□□□□ -1.29
NUP98-220ENST00000533346 M0R3E3 92 aa7.01□□□□□ -1.29
NUP98-220ENST00000533346 MBP02144 154 aa7.01□□□□□ -1.29
NUP98-220ENST00000533346 LEPP41159 167 aa7.01□□□□□ -1.29
NUP98-220ENST00000533346 BAP18Q8IXM2 172 aa7.01□□□□□ -1.29
NUP98-220ENST00000533346 INO80EQ8NBZ0 244 aaPredicted RBP7.01□□□□□ -1.29
NUP98-220ENST00000533346 NIPSNAP3BQ9BS92 247 aa7.01□□□□□ -1.29
NUP98-220ENST00000533346 TMEM208Q9BTX3 173 aa7.01□□□□□ -1.29
NUP98-220ENST00000533346 AGPAT4-IT1Q9H0P7 198 aa7.01□□□□□ -1.29
NUP98-220ENST00000533346 YTHDF2Q9Y5A9 579 aaKnown RBP7.01□□□□□ -1.29
NUP98-220ENST00000533346 LENEPQ9Y5L5 61 aa7.01□□□□□ -1.29
NUP98-220ENST00000533346 PCLOQ9Y6V0 5065 aa7.01□□□□□ -1.29
NUP98-220ENST00000533346 FRAS1Q86XX4 4008 aa7.01□□□□□ -1.29
NUP98-220ENST00000533346 TRAV12-2A0A075B6T6 113 aa7□□□□□ -1.29
NUP98-220ENST00000533346 IGHV3OR16-12A0A075B7B8 117 aa7□□□□□ -1.29
NUP98-220ENST00000533346 DEFB131BA0A096LNP1 70 aa7□□□□□ -1.29
NUP98-220ENST00000533346 TAAR5O14804 337 aa7□□□□□ -1.29
NUP98-220ENST00000533346 ZNF324O75467 553 aaPredicted RBP7□□□□□ -1.29
NUP98-220ENST00000533346 STAG3L2P0CL84 134 aa7□□□□□ -1.29
NUP98-220ENST00000533346 STAG3L3P0CL85 134 aa7□□□□□ -1.29
NUP98-220ENST00000533346 ATP6V0CP27449 155 aa7□□□□□ -1.29
NUP98-220ENST00000533346 ICAM4Q14773 271 aa7□□□□□ -1.29
NUP98-220ENST00000533346 FAM222AQ5U5X8 452 aa7□□□□□ -1.29
NUP98-220ENST00000533346 GFI1BQ5VTD9 330 aa7□□□□□ -1.29
NUP98-220ENST00000533346 EXOC3-AS1Q8N2X6 119 aa7□□□□□ -1.29
NUP98-220ENST00000533346 LINC00612Q8N6U2 182 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms