RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 RAB24Q969Q5 203 aa8.33□□□□□ -1.08
TRAPPC4-211ENST00000533012 FXYD5Q96DB9 178 aa8.33□□□□□ -1.08
TRAPPC4-211ENST00000533012 ZNF331Q9NQX6 463 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC4-211ENST00000533012 CTXND1A0A1B0GTU2 59 aa8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 RBMY1BA6NDE4 496 aaKnown RBP8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 RBMY1EA6NEQ0 496 aaKnown RBP8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 RBFOX3A6NFN3 312 aa8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 KNCNA6PVL3 124 aa8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 HMGB3O15347 200 aaKnown RBP8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 ZNF253O75346 499 aa8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 EIF3GO75821 320 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 OR10J4P0C629 311 aa8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 RBMY1DP0C7P1 496 aaKnown RBP8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 STAG3L2P0CL84 134 aa8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 STAG3L3P0CL85 134 aa8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 PSG9Q00887 426 aa8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 PDE6HQ13956 83 aa8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 PSG3Q16557 428 aa8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 ACTL10Q5JWF8 245 aa8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 EBLN2Q6P2I7 272 aa8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 C20orf173Q96LM9 149 aa8.32□□□□□ -1.08
TRAPPC4-211ENST00000533012 CXorf1O96002 111 aa8.31□□□□□ -1.08
TRAPPC4-211ENST00000533012 RPL35AP18077 110 aaKnown RBP8.31□□□□□ -1.08
TRAPPC4-211ENST00000533012 UBE2L3P68036 154 aaKnown RBP8.31□□□□□ -1.08
TRAPPC4-211ENST00000533012 BTN1A1Q13410 526 aa8.31□□□□□ -1.08
TRAPPC4-211ENST00000533012 RHEBQ15382 184 aa8.31□□□□□ -1.08
TRAPPC4-211ENST00000533012 SOHLH1Q5JUK2 328 aa8.31□□□□□ -1.08
TRAPPC4-211ENST00000533012 ZNF506Q5JVG8 444 aa8.31□□□□□ -1.08
TRAPPC4-211ENST00000533012 LINC00322Q6ZN03 302 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC4-211ENST00000533012 FOXI2Q6ZQN5 318 aa8.31□□□□□ -1.08
TRAPPC4-211ENST00000533012 RNF182Q8N6D2 247 aa8.31□□□□□ -1.08
TRAPPC4-211ENST00000533012 ZNF738Q8NE65 137 aa8.31□□□□□ -1.08
TRAPPC4-211ENST00000533012 ZNF503Q96F45 646 aa8.31□□□□□ -1.08
TRAPPC4-211ENST00000533012 AAMDCQ9H7C9 122 aa8.31□□□□□ -1.08
TRAPPC4-211ENST00000533012 MANBALQ9NQG1 85 aa8.31□□□□□ -1.08
TRAPPC4-211ENST00000533012 MAP1LC3B2A6NCE7 125 aa8.3□□□□□ -1.08
TRAPPC4-211ENST00000533012 SLC17A3O00476 420 aa8.3□□□□□ -1.08
TRAPPC4-211ENST00000533012 NDUFB4O95168 129 aa8.3□□□□□ -1.08
TRAPPC4-211ENST00000533012 ARL14EPLP0DKL9 152 aa8.3□□□□□ -1.08
TRAPPC4-211ENST00000533012 HLA-DMBP28068 263 aa8.3□□□□□ -1.08
TRAPPC4-211ENST00000533012 APOC4P55056 127 aa8.3□□□□□ -1.08
TRAPPC4-211ENST00000533012 RANP62826 216 aaKnown RBP8.3□□□□□ -1.08
TRAPPC4-211ENST00000533012 LYPD1Q8N2G4 141 aa8.3□□□□□ -1.08
TRAPPC4-211ENST00000533012 ASCL2Q99929 193 aa8.3□□□□□ -1.08
TRAPPC4-211ENST00000533012 B9D2Q9BPU9 175 aa8.3□□□□□ -1.08
TRAPPC4-211ENST00000533012 TXNDC17Q9BRA2 123 aa8.3□□□□□ -1.08
TRAPPC4-211ENST00000533012 MAP1LC3BQ9GZQ8 125 aa8.3□□□□□ -1.08
TRAPPC4-211ENST00000533012 SAV1Q9H4B6 383 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC4-211ENST00000533012 TMEM167BQ9NRX6 74 aa8.3□□□□□ -1.08
TRAPPC4-211ENST00000533012 PLA2G2EQ9NZK7 142 aa8.3□□□□□ -1.08
TRAPPC4-211ENST00000533012 PRELID1Q9Y255 219 aa8.3□□□□□ -1.08
TRAPPC4-211ENST00000533012 KIR2DL5BA0A0G2JN68 375 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 KIR2DL5BA0A0G2JPC4 375 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 H3BMM0 161 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 DUSP14O95147 198 aaKnown RBP8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 HLA-DRB4P13762 266 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 GCHFRP30047 84 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 FHITP49789 147 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 DEFB1P60022 68 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 ZNF726P1Q15940 193 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 HAGHQ16775 308 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 TRPT1Q86TN4 253 aaKnown RBP8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 SBSPONQ8IVN8 264 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 IQCF2Q8IXL9 164 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 KIR2DL5AQ8N109 375 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 CLRN3Q8NCR9 226 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 KIR2DL5BQ8NHK3 375 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 RPUSD4Q96CM3 377 aaKnown RBP8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 CSTL1Q9H114 145 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 SMCO4Q9NRQ5 59 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 VAX2Q9UIW0 290 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 HLA-DRB4X5D2U9 266 aa8.29□□□□□ -1.08
TRAPPC4-211ENST00000533012 A0A0J9YX75 114 aa8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 ZNF705FA8MVS1 300 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 B4DEV8 164 aa8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 F6UB75 175 aa8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 UBE2CO00762 179 aa8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 SCO1O75880 301 aa8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 NHLRC4P0CG21 123 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 BCL2P10415 239 aa8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 ADCYAP1P18509 176 aa8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 CSN1S1P47710 185 aa8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 NUTF2P61970 127 aaKnown RBP8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 SRSF3P84103 164 aaKnown RBP8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 PNRC1Q12796 327 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 ICAM4Q14773 271 aa8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 GDF5OSQ5U4N7 250 aa8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 MORN3Q6PF18 240 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 SSX7Q7RTT5 188 aa8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 EXOC3-AS1Q8N2X6 119 aa8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 OR4B1Q8NGF8 309 aa8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 MRPL53Q96EL3 112 aaKnown RBP8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 NIPSNAP3BQ9BS92 247 aa8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 GNG13Q9P2W3 67 aa8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 TMA7Q9Y2S6 64 aaKnown RBP8.28□□□□□ -1.08
TRAPPC4-211ENST00000533012 LOC102723971A0A1B0GUV8 181 aa8.27□□□□□ -1.09
TRAPPC4-211ENST00000533012 PGPA6NDG6 321 aa8.27□□□□□ -1.09
TRAPPC4-211ENST00000533012 M0R036 132 aa8.27□□□□□ -1.09
TRAPPC4-211ENST00000533012 IGKV3-20P01619 116 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms