RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 HS3ST6Q96QI5 342 aa7.08□□□□□ -1.28
CTNND1-232ENST00000532649 ZNF138P52744 262 aa7.08□□□□□ -1.28
CTNND1-232ENST00000532649 EFNB3Q15768 340 aa7.08□□□□□ -1.28
CTNND1-232ENST00000532649 Q6ZR03 302 aa7.08□□□□□ -1.28
CTNND1-232ENST00000532649 TECTAO75443 2155 aa7.08□□□□□ -1.28
CTNND1-232ENST00000532649 DENND4CQ5VZ89 1909 aa7.08□□□□□ -1.28
CTNND1-232ENST00000532649 YLPM1P49750 1951 aaKnown RBP7.08□□□□□ -1.28
CTNND1-232ENST00000532649 hADV29S1A0JD25 119 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 TCRAP04437 139 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 WDR83OSQ9Y284 106 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 SIGLEC9Q9Y336 463 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 IGKV1-5P01602 117 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 SRP19P09132 144 aaKnown RBP7.07□□□□□ -1.28
CTNND1-232ENST00000532649 GATA3P23771 443 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 ZNF124Q15973 351 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 NTF4P34130 210 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 IGF2-ASQ6U949 168 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 LY6G5BQ8NDX9 201 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 GAGE12JA6NER3 117 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 A8MXK9 166 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 PRB4P10163 310 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-232ENST00000532649 GAGE1Q13065 139 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 GAGE4Q13068 117 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 GAGE5Q13069 117 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 TREML4Q6UXN2 200 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 Q8TCH9 128 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 DSCR8Q96T75 97 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 ZNRD1Q9P1U0 126 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 PRB1P04280 392 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 TRPT1Q86TN4 253 aaKnown RBP7.07□□□□□ -1.28
CTNND1-232ENST00000532649 SLX1AQ9BQ83 275 aa7.07□□□□□ -1.28
CTNND1-232ENST00000532649 WFDC1Q9HC57 220 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 OSTCQ9NRP0 149 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 SPANXA1Q9NS26 97 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 A0A1B0GWJ7 208 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 ZGRF1Q86YA3 2104 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 CRLF1O75462 422 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 IGLV1-44P01699 117 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 C4orf48Q5BLP8 95 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 SPXQ9BT56 116 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 A0A1W2PRE2 83 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 NCR2O95944 276 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 SPINK8P0C7L1 97 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 AZU1P20160 251 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 UBE2E1P51965 193 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 TSKUQ8WUA8 353 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 GTSF1LQ9H1H1 148 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 SERF1AO75920 110 aa7.06□□□□□ -1.28
CTNND1-232ENST00000532649 SLC25A39Q9BZJ4 359 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-232ENST00000532649 SH2D1AO60880 128 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 IGKV1-16P04430 117 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 SYNJ2BPP57105 145 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 DEFB131AP59861 70 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 NMSQ5H8A3 153 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 WNK2Q9Y3S1 2297 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 DUX4L9Q6RFH8 374 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-232ENST00000532649 SCRT2Q9NQ03 307 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 IGHV2-70DA0A0C4DH43 119 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 D6R8Y8 96 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 TRACP01848 142 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 GRNP28799 593 aaKnown RBP7.05□□□□□ -1.28
CTNND1-232ENST00000532649 Q6ZS49 121 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 Q71RC1 249 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-232ENST00000532649 NDUFAF3Q9BU61 184 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 RHPN1-AS1Q9BWJ2 59 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 VSIRQ9H7M9 311 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 LRRK1Q38SD2 2015 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 A0A087WWL8 130 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 IGHV1-69DA0A0B4J2H0 117 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 PMS2P5A8MQ11 134 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 IGHV1-69P01742 117 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 SCRT1Q9BWW7 348 aa7.05□□□□□ -1.28
CTNND1-232ENST00000532649 IGFL2Q6UWQ7 119 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 WDR86Q86TI4 376 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 GNB1LQ9BYB4 327 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 UBL5Q9BZL1 73 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 PRSS29PA6NIE9 313 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 CR1LQ2VPA4 569 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 C5orf47Q569G3 176 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 DAZ1Q9NQZ3 744 aaKnown RBP7.04□□□□□ -1.28
CTNND1-232ENST00000532649 PAX9P55771 341 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 TMEM258P61165 79 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 LYZL1Q6UWQ5 148 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 TMEM158Q8WZ71 300 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 ADAMTS9Q9P2N4 1935 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 IGKV2D-24A0A075B6R9 120 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 A0A087WWC5 75 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 PFN2P35080 140 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 C14orf178Q8N769 122 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-232ENST00000532649 XCL2Q9UBD3 114 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 TRGV9Q99603 122 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 PRO3102Q9H379 93 aa7.04□□□□□ -1.28
CTNND1-232ENST00000532649 MST1LQ2TV78 715 aa7.03□□□□□ -1.28
CTNND1-232ENST00000532649 RHODO00212 210 aa7.03□□□□□ -1.28
CTNND1-232ENST00000532649 LMO1P25800 156 aa7.03□□□□□ -1.28
CTNND1-232ENST00000532649 SPATA31B1PQ5VZV4 182 aa7.03□□□□□ -1.28
CTNND1-232ENST00000532649 EP400Q96L91 3159 aa7.03□□□□□ -1.28
CTNND1-232ENST00000532649 IGKV1OR2-108A0A075B7D4 117 aa7.03□□□□□ -1.28
CTNND1-232ENST00000532649 IGLV3-9A0A075B6K5 115 aa7.03□□□□□ -1.28
CTNND1-232ENST00000532649 LOXP28300 417 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms