RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 ERG28Q9UKR5 140 aa11.88□□□□□ -0.51
PCDHA9-202ENST00000532602 LOXP28300 417 aaPredicted RBP11.88□□□□□ -0.51
PCDHA9-202ENST00000532602 Q6ZRM9 215 aa11.88□□□□□ -0.51
PCDHA9-202ENST00000532602 PLXNB3Q9ULL4 1909 aa11.88□□□□□ -0.51
PCDHA9-202ENST00000532602 H3BUT2 72 aa11.88□□□□□ -0.51
PCDHA9-202ENST00000532602 IGHV4-39P01824 125 aa11.88□□□□□ -0.51
PCDHA9-202ENST00000532602 ZNF407Q9C0G0 2248 aa11.88□□□□□ -0.51
PCDHA9-202ENST00000532602 DIAPH2-AS1Q14236 149 aa11.88□□□□□ -0.51
PCDHA9-202ENST00000532602 C17orf58Q2M2W7 97 aa11.88□□□□□ -0.51
PCDHA9-202ENST00000532602 TEX36Q5VZQ5 186 aa11.88□□□□□ -0.51
PCDHA9-202ENST00000532602 XCL2Q9UBD3 114 aa11.88□□□□□ -0.51
PCDHA9-202ENST00000532602 F5H768 121 aa11.87□□□□□ -0.51
PCDHA9-202ENST00000532602 ELANEP08246 267 aa11.87□□□□□ -0.51
PCDHA9-202ENST00000532602 IGLV1-44P01699 117 aa11.87□□□□□ -0.51
PCDHA9-202ENST00000532602 TRPT1Q86TN4 253 aaKnown RBP11.87□□□□□ -0.51
PCDHA9-202ENST00000532602 LY6G5BQ8NDX9 201 aa11.87□□□□□ -0.51
PCDHA9-202ENST00000532602 LRRK1Q38SD2 2015 aa11.87□□□□□ -0.51
PCDHA9-202ENST00000532602 Q86TA4 180 aa11.87□□□□□ -0.51
PCDHA9-202ENST00000532602 NDUFA4O00483 81 aa11.87□□□□□ -0.51
PCDHA9-202ENST00000532602 HSD52Q0P140 79 aa11.87□□□□□ -0.51
PCDHA9-202ENST00000532602 CYTL1Q9NRR1 136 aa11.87□□□□□ -0.51
PCDHA9-202ENST00000532602 IGLV3-9A0A075B6K5 115 aa11.87□□□□□ -0.51
PCDHA9-202ENST00000532602 TRAV8-2A0A0B4J237 113 aa11.87□□□□□ -0.51
PCDHA9-202ENST00000532602 ZNF833PQ6ZTB9 187 aa11.87□□□□□ -0.51
PCDHA9-202ENST00000532602 ORAOV1Q8WV07 137 aa11.87□□□□□ -0.51
PCDHA9-202ENST00000532602 NRGNQ92686 78 aa11.87□□□□□ -0.51
PCDHA9-202ENST00000532602 SPRNQ5BIV9 151 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 ARFGEF3Q5TH69 2177 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 MYMXA0A1B0GTQ4 84 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 TRAV8-1A0A0A6YYK1 113 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 HIST1H2BKO60814 126 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 HIST1H2BJP06899 126 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 HIST1H2BOP23527 126 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 HIST1H2BBP33778 126 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 HIST1H2BDP58876 126 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 HIST1H2BCP62807 126 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 HIST2H2BEQ16778 126 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 HAPLN4Q86UW8 402 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 HIST1H2BHQ93079 126 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 HIST1H2BNQ99877 126 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 HIST1H2BMQ99879 126 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 SPOCK3Q9BQ16 436 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 TRAV13-1A0A0B4J241 112 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 ARMS2P0C7Q2 107 aa11.86□□□□□ -0.51
PCDHA9-202ENST00000532602 A0A1B0GV90 55 aa11.85□□□□□ -0.51
PCDHA9-202ENST00000532602 MMP23AO75900 390 aa11.85□□□□□ -0.51
PCDHA9-202ENST00000532602 TMEM14BQ9NUH8 114 aa11.85□□□□□ -0.51
PCDHA9-202ENST00000532602 GATD1Q8NB37 220 aa11.85□□□□□ -0.51
PCDHA9-202ENST00000532602 NDUFA4L2Q9NRX3 87 aa11.85□□□□□ -0.51
PCDHA9-202ENST00000532602 TCTEX1D4Q5JR98 221 aa11.85□□□□□ -0.51
PCDHA9-202ENST00000532602 DMRTA1Q5VZB9 504 aa11.85□□□□□ -0.51
PCDHA9-202ENST00000532602 TPSG1Q9NRR2 321 aa11.85□□□□□ -0.51
PCDHA9-202ENST00000532602 A0A087WWL8 130 aa11.85□□□□□ -0.51
PCDHA9-202ENST00000532602 NUP35Q8NFH5 326 aa11.85□□□□□ -0.51
PCDHA9-202ENST00000532602 SFTA2Q6UW10 78 aa11.84□□□□□ -0.51
PCDHA9-202ENST00000532602 GFRA4Q9GZZ7 299 aa11.84□□□□□ -0.51
PCDHA9-202ENST00000532602 MRPL27Q9P0M9 148 aaKnown RBP11.84□□□□□ -0.51
PCDHA9-202ENST00000532602 SHISA9B4DS77 424 aa11.84□□□□□ -0.51
PCDHA9-202ENST00000532602 EREGO14944 169 aa11.84□□□□□ -0.51
PCDHA9-202ENST00000532602 CFHR3Q02985 330 aa11.84□□□□□ -0.51
PCDHA9-202ENST00000532602 A0A1W2PNU3 283 aaPredicted RBP11.84□□□□□ -0.51
PCDHA9-202ENST00000532602 OVOL2Q9BRP0 275 aa11.84□□□□□ -0.51
PCDHA9-202ENST00000532602 RSPO1Q2MKA7 263 aaPredicted RBP11.84□□□□□ -0.51
PCDHA9-202ENST00000532602 ZNF479Q96JC4 524 aa11.84□□□□□ -0.51
PCDHA9-202ENST00000532602 KAAG1Q9UBP8 84 aa11.84□□□□□ -0.51
PCDHA9-202ENST00000532602 A8MWV9 139 aa11.83□□□□□ -0.52
PCDHA9-202ENST00000532602 RMI2Q96E14 147 aa11.83□□□□□ -0.52
PCDHA9-202ENST00000532602 PRIMA1Q86XR5 153 aa11.83□□□□□ -0.52
PCDHA9-202ENST00000532602 CFPP27918 469 aa11.83□□□□□ -0.52
PCDHA9-202ENST00000532602 TMEM75Q8N9X5 138 aa11.83□□□□□ -0.52
PCDHA9-202ENST00000532602 ZNF561-AS1K7EIQ3 104 aa11.83□□□□□ -0.52
PCDHA9-202ENST00000532602 SPINK13Q1W4C9 94 aa11.83□□□□□ -0.52
PCDHA9-202ENST00000532602 TRBV25-1A0A075B6N4 114 aa11.82□□□□□ -0.52
PCDHA9-202ENST00000532602 LEPROTO15243 131 aa11.82□□□□□ -0.52
PCDHA9-202ENST00000532602 PFN1P07737 140 aaKnown RBP11.82□□□□□ -0.52
PCDHA9-202ENST00000532602 SLX1AQ9BQ83 275 aa11.82□□□□□ -0.52
PCDHA9-202ENST00000532602 FAM208BQ5VWN6 2430 aa11.82□□□□□ -0.52
PCDHA9-202ENST00000532602 DOCK10Q96BY6 2186 aa11.82□□□□□ -0.52
PCDHA9-202ENST00000532602 TIMM21Q9BVV7 248 aa11.82□□□□□ -0.52
PCDHA9-202ENST00000532602 PCNX1Q96RV3 2341 aa11.82□□□□□ -0.52
PCDHA9-202ENST00000532602 H3BUA1 57 aa11.82□□□□□ -0.52
PCDHA9-202ENST00000532602 LAMTOR3Q9UHA4 124 aa11.82□□□□□ -0.52
PCDHA9-202ENST00000532602 TMEM158Q8WZ71 300 aa11.82□□□□□ -0.52
PCDHA9-202ENST00000532602 ZMAT4Q9H898 229 aa11.82□□□□□ -0.52
PCDHA9-202ENST00000532602 IGHV1OR15-1A0A075B7D0 117 aa11.81□□□□□ -0.52
PCDHA9-202ENST00000532602 DKK1O94907 266 aa11.81□□□□□ -0.52
PCDHA9-202ENST00000532602 NDUFAF3Q9BU61 184 aa11.81□□□□□ -0.52
PCDHA9-202ENST00000532602 ATRXP46100 2492 aa11.81□□□□□ -0.52
PCDHA9-202ENST00000532602 SSBP2P81877 361 aaPredicted RBP11.81□□□□□ -0.52
PCDHA9-202ENST00000532602 IGF2-ASQ6U949 168 aa11.81□□□□□ -0.52
PCDHA9-202ENST00000532602 LTBP2Q14767 1821 aa11.81□□□□□ -0.52
PCDHA9-202ENST00000532602 INS-IGF2F8WCM5 200 aa11.81□□□□□ -0.52
PCDHA9-202ENST00000532602 ZNF492Q9P255 531 aa11.81□□□□□ -0.52
PCDHA9-202ENST00000532602 FAM231BA6NCW3 169 aa11.8□□□□□ -0.52
PCDHA9-202ENST00000532602 CDKN1BP46527 198 aa11.8□□□□□ -0.52
PCDHA9-202ENST00000532602 GAGE12JA6NER3 117 aa11.8□□□□□ -0.52
PCDHA9-202ENST00000532602 ZNF134P52741 427 aa11.8□□□□□ -0.52
PCDHA9-202ENST00000532602 NPC2P61916 151 aa11.8□□□□□ -0.52
PCDHA9-202ENST00000532602 GAGE1Q13065 139 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms