RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 KIF26BQ2KJY2 2108 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 IGHV1-58A0A0C4DH39 117 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 UBE2L5PA0A1B0GUS4 154 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 hADV29S1A0JD25 119 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 TMEM14DPA8MWL7 114 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 SYNGR2O43760 224 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 BCE1O60756 84 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 SCRG1O75711 98 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 APOHP02749 345 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 MGST1P10620 155 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 IL9P15248 144 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 FKBP1AP62942 108 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 ERCC8Q13216 396 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 ABCA11PQ4W5N1 156 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 ZC2HC1BQ5TFG8 222 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 C1orf140Q5VVS0 124 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 KCTD18Q6PI47 426 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 SDIM1Q6ZPB5 146 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 LINC00305Q7Z4B0 112 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 RPRMLQ8N4K4 120 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 RPP25LQ8N5L8 163 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 ZNF525Q8N782 197 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 GVQW1Q8N7I0 195 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 C3orf56Q8N813 242 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 MPLKIPQ8TAP9 179 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 NTN5Q8WTR8 489 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 CLEC4CQ8WTT0 213 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 SSMEM1Q8WWF3 244 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 TAF15Q92804 592 aaKnown RBP eCLIP3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 URB1-AS1Q96HZ7 61 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 IGF2BP2-AS1Q96M15 143 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 PAXXQ9BUH6 204 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 DYNLRB1Q9NP97 96 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 HHLA3Q9XRX5 114 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 F11RQ9Y624 299 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 SELENOKQ9Y6D0 94 aa3.73□□□□□ -1.81
ECHDC1-221ENST00000531582 EML5Q05BV3 1969 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 MYO7AQ13402 2215 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 COL4A4P53420 1690 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 TRBV7-3A0A075B6L6 115 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 TRBV25-1A0A075B6N4 114 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 H3BMM0 161 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 MRPS12O15235 138 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 CCL16O15467 120 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 HBDP02042 147 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 IFI6P09912 130 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 PSMB2P49721 201 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 RPL18Q07020 188 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 CST6Q15828 149 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 LYZL2Q7Z4W2 148 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 ODF3L1Q8IXM7 274 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 SLC22A24Q8N4F4 322 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 RAB42Q8N4Z0 105 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 DCAF4L2Q8NA75 395 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 NT5CQ8TCD5 201 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 RPL36ALQ969Q0 106 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 UBE2WQ96B02 151 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 DSCR8Q96T75 97 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 RPP25Q9BUL9 199 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 PRRG4Q9BZD6 226 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 LINC00597Q9H2U6 94 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 LIME1Q9H400 295 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 PLEKHA3Q9HB20 300 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 CALYQ9NYX4 217 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 TP73-AS1Q9UF72 201 aa3.72□□□□□ -1.81
ECHDC1-221ENST00000531582 TRBV10-2A0A0K0K1G8 114 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 A0A1B0GXF2 115 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 C19orf71A6NCJ1 209 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 C17orf100A8MU93 164 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 HMGN4O00479 90 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 NDUFB3O43676 98 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 NDUFS5O43920 106 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 EFNA2O43921 213 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 TCRAP04437 139 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 DUTP33316 252 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 UBE2D1P51668 147 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 EFNA4P52798 201 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 SUB1P53999 127 aaKnown RBP eCLIP3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 APOC4P55056 127 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 PCBD1P61457 104 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 ERVK-16P61578 105 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 TWIST1Q15672 202 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 ZNF56Q15929 161 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 SLC48A1Q6P1K1 146 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 SCGB1D4Q6XE38 83 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 PCP2Q8IVA1 136 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 ZCCHC24Q8N2G6 241 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 Q96M85 177 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 TM2D3Q9BRN9 247 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 DEFB127Q9H1M4 99 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 PHPT1Q9NRX4 125 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 TCF20Q9UGU0 1960 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 ATG2BQ96BY7 2078 aa3.71□□□□□ -1.82
ECHDC1-221ENST00000531582 TRBV20OR9-2A0A075B6H5 130 aa3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 K7ERJ3 54 aa3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 NDUFC1O43677 76 aa3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 EPPINO95925 133 aa3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 HERVK_113P61574 105 aa3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 DAD1P61803 113 aa3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 HBBP68871 147 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms