RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 NBL1P41271 181 aa11.79□□□□□ -0.52
LRRK1-207ENST00000531270 RNF144BQ7Z419 303 aa11.79□□□□□ -0.52
LRRK1-207ENST00000531270 Q6P435 159 aa11.79□□□□□ -0.52
LRRK1-207ENST00000531270 CYTL1Q9NRR1 136 aa11.79□□□□□ -0.52
LRRK1-207ENST00000531270 XCL1P47992 114 aa11.79□□□□□ -0.52
LRRK1-207ENST00000531270 GAS1P54826 345 aa11.79□□□□□ -0.52
LRRK1-207ENST00000531270 NMSQ5H8A3 153 aa11.79□□□□□ -0.52
LRRK1-207ENST00000531270 SIPA1L3O60292 1781 aaPredicted RBP11.78□□□□□ -0.52
LRRK1-207ENST00000531270 IGHV1-69DA0A0B4J2H0 117 aa11.78□□□□□ -0.52
LRRK1-207ENST00000531270 A0A1W2PPI3 338 aa11.78□□□□□ -0.52
LRRK1-207ENST00000531270 IGHV1-69P01742 117 aa11.78□□□□□ -0.52
LRRK1-207ENST00000531270 PFN1P07737 140 aaKnown RBP11.78□□□□□ -0.52
LRRK1-207ENST00000531270 FGF6P10767 208 aa11.78□□□□□ -0.52
LRRK1-207ENST00000531270 SDHAF1A6NFY7 115 aa11.78□□□□□ -0.52
LRRK1-207ENST00000531270 UBE2V1Q13404 147 aa11.77□□□□□ -0.52
LRRK1-207ENST00000531270 TIMM17AQ99595 171 aa11.77□□□□□ -0.52
LRRK1-207ENST00000531270 NDUFA12Q9UI09 145 aa11.77□□□□□ -0.52
LRRK1-207ENST00000531270 MTCL1Q9Y4B5 1905 aaKnown RBP11.77□□□□□ -0.53
LRRK1-207ENST00000531270 FAM231BA6NCW3 169 aa11.77□□□□□ -0.53
LRRK1-207ENST00000531270 TRACP01848 142 aa11.77□□□□□ -0.53
LRRK1-207ENST00000531270 UBE2E1P51965 193 aa11.77□□□□□ -0.53
LRRK1-207ENST00000531270 MRPL27Q9P0M9 148 aaKnown RBP11.77□□□□□ -0.53
LRRK1-207ENST00000531270 TEX36Q5VZQ5 186 aa11.77□□□□□ -0.53
LRRK1-207ENST00000531270 TEX48A0A1B0GUV7 120 aa11.76□□□□□ -0.53
LRRK1-207ENST00000531270 C8orf86Q6ZUL3 223 aa11.76□□□□□ -0.53
LRRK1-207ENST00000531270 TMEM75Q8N9X5 138 aa11.76□□□□□ -0.53
LRRK1-207ENST00000531270 SEC16AO15027 2179 aa11.76□□□□□ -0.53
LRRK1-207ENST00000531270 A0A0G2JRQ6 117 aa11.76□□□□□ -0.53
LRRK1-207ENST00000531270 TMEM190Q8WZ59 177 aa11.76□□□□□ -0.53
LRRK1-207ENST00000531270 EGR2P11161 476 aaPredicted RBP11.76□□□□□ -0.53
LRRK1-207ENST00000531270 Q8N8P6 123 aa11.75□□□□□ -0.53
LRRK1-207ENST00000531270 MARF1Q9Y4F3 1742 aaKnown RBP11.75□□□□□ -0.53
LRRK1-207ENST00000531270 TRAV1-1A0A0B4J248 108 aa11.75□□□□□ -0.53
LRRK1-207ENST00000531270 CDKN1BP46527 198 aa11.75□□□□□ -0.53
LRRK1-207ENST00000531270 RTTNQ86VV8 2226 aa11.75□□□□□ -0.53
LRRK1-207ENST00000531270 CARD19Q96LW7 228 aa11.75□□□□□ -0.53
LRRK1-207ENST00000531270 LHFPL1Q86WI0 220 aa11.74□□□□□ -0.53
LRRK1-207ENST00000531270 NOP10Q9NPE3 64 aaKnown RBP11.74□□□□□ -0.53
LRRK1-207ENST00000531270 A0A1B0GUS0 222 aa11.74□□□□□ -0.53
LRRK1-207ENST00000531270 LY96Q9Y6Y9 160 aa11.74□□□□□ -0.53
LRRK1-207ENST00000531270 J3QRE1 110 aa11.74□□□□□ -0.53
LRRK1-207ENST00000531270 RBM3P98179 157 aaKnown RBP11.74□□□□□ -0.53
LRRK1-207ENST00000531270 GFRA4Q9GZZ7 299 aa11.74□□□□□ -0.53
LRRK1-207ENST00000531270 CT83Q5H943 113 aa11.74□□□□□ -0.53
LRRK1-207ENST00000531270 KLHDC3Q9BQ90 382 aa11.74□□□□□ -0.53
LRRK1-207ENST00000531270 LAMB2P55268 1798 aa11.74□□□□□ -0.53
LRRK1-207ENST00000531270 GATA3P23771 443 aa11.74□□□□□ -0.53
LRRK1-207ENST00000531270 ASPHD1Q5U4P2 390 aa11.74□□□□□ -0.53
LRRK1-207ENST00000531270 PRSS46E5RG02 174 aa11.73□□□□□ -0.53
LRRK1-207ENST00000531270 PNRC2Q9NPJ4 139 aaKnown RBP11.73□□□□□ -0.53
LRRK1-207ENST00000531270 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.73□□□□□ -0.53
LRRK1-207ENST00000531270 CSRP3P50461 194 aa11.73□□□□□ -0.53
LRRK1-207ENST00000531270 PDE6HQ13956 83 aa11.73□□□□□ -0.53
LRRK1-207ENST00000531270 UTF1Q5T230 341 aa11.73□□□□□ -0.53
LRRK1-207ENST00000531270 TSSC4Q9Y5U2 329 aaPredicted RBP11.73□□□□□ -0.53
LRRK1-207ENST00000531270 MRPL51Q4U2R6 128 aaKnown RBP11.72□□□□□ -0.53
LRRK1-207ENST00000531270 J3QKU1 62 aa11.72□□□□□ -0.53
LRRK1-207ENST00000531270 FAM104BQ5XKR9 115 aa11.72□□□□□ -0.53
LRRK1-207ENST00000531270 CFHR4Q92496 578 aa11.72□□□□□ -0.53
LRRK1-207ENST00000531270 TRAV13-2A0A0B4J235 113 aa11.72□□□□□ -0.53
LRRK1-207ENST00000531270 IGHV1-24A0A0C4DH33 117 aa11.72□□□□□ -0.53
LRRK1-207ENST00000531270 A0A1B0GW64 132 aa11.72□□□□□ -0.53
LRRK1-207ENST00000531270 BAALCQ8WXS3 180 aa11.72□□□□□ -0.53
LRRK1-207ENST00000531270 IGHV2-70DA0A0C4DH43 119 aa11.71□□□□□ -0.53
LRRK1-207ENST00000531270 FAM120AOSQ5T036 256 aa11.71□□□□□ -0.53
LRRK1-207ENST00000531270 SHISA9B4DS77 424 aa11.71□□□□□ -0.53
LRRK1-207ENST00000531270 ZNF664Q8N3J9 261 aa11.71□□□□□ -0.53
LRRK1-207ENST00000531270 BUB3O43684 328 aa11.71□□□□□ -0.54
LRRK1-207ENST00000531270 ANKRD36A6QL64 1941 aa11.71□□□□□ -0.54
LRRK1-207ENST00000531270 CRYBA4P53673 196 aa11.71□□□□□ -0.54
LRRK1-207ENST00000531270 Q6ZRM9 215 aa11.71□□□□□ -0.54
LRRK1-207ENST00000531270 IFITM1P13164 125 aa11.7□□□□□ -0.54
LRRK1-207ENST00000531270 SLAQ13239 276 aa11.7□□□□□ -0.54
LRRK1-207ENST00000531270 STRCP1A6NGW2 1772 aa11.7□□□□□ -0.54
LRRK1-207ENST00000531270 SRSF8Q9BRL6 282 aaKnown RBP11.7□□□□□ -0.54
LRRK1-207ENST00000531270 TIRAPP58753 221 aa11.7□□□□□ -0.54
LRRK1-207ENST00000531270 DUX4L9Q6RFH8 374 aaPredicted RBP11.7□□□□□ -0.54
LRRK1-207ENST00000531270 ETDCA0A1B0GVM5 59 aa11.7□□□□□ -0.54
LRRK1-207ENST00000531270 ZNF503Q96F45 646 aa11.7□□□□□ -0.54
LRRK1-207ENST00000531270 Q6ZS92 163 aa11.7□□□□□ -0.54
LRRK1-207ENST00000531270 BOD1L2Q8IYS8 172 aa11.7□□□□□ -0.54
LRRK1-207ENST00000531270 C15orf53Q8NAA6 179 aa11.7□□□□□ -0.54
LRRK1-207ENST00000531270 AKAP6Q13023 2319 aa11.7□□□□□ -0.54
LRRK1-207ENST00000531270 ARFGEF1Q9Y6D6 1849 aa11.69□□□□□ -0.54
LRRK1-207ENST00000531270 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.69□□□□□ -0.54
LRRK1-207ENST00000531270 IGKV2-29A2NJV5 120 aaPredicted RBP11.69□□□□□ -0.54
LRRK1-207ENST00000531270 K7ERJ3 54 aa11.69□□□□□ -0.54
LRRK1-207ENST00000531270 HERVK_113P63121 156 aa11.69□□□□□ -0.54
LRRK1-207ENST00000531270 CYYR1Q96J86 154 aa11.69□□□□□ -0.54
LRRK1-207ENST00000531270 DLEC1Q9Y238 1755 aa11.69□□□□□ -0.54
LRRK1-207ENST00000531270 RGPD3A6NKT7 1758 aaPredicted RBP11.69□□□□□ -0.54
LRRK1-207ENST00000531270 TRBV19A0A075B6N1 114 aa11.69□□□□□ -0.54
LRRK1-207ENST00000531270 IGHV3-30P01768 117 aa11.69□□□□□ -0.54
LRRK1-207ENST00000531270 IGHV3-33P01772 117 aa11.69□□□□□ -0.54
LRRK1-207ENST00000531270 IGHV3-30-3P0DP02 117 aa11.69□□□□□ -0.54
LRRK1-207ENST00000531270 IGHV3-30-5P0DP03 117 aa11.69□□□□□ -0.54
LRRK1-207ENST00000531270 SPTA1P02549 2419 aa11.69□□□□□ -0.54
LRRK1-207ENST00000531270 TRBV20-1A0A075B6N2 111 aa11.69□□□□□ -0.54
LRRK1-207ENST00000531270 WIPF3A6NGB9 483 aa11.69□□□□□ -0.54
LRRK1-207ENST00000531270 PYY3Q5JQD4 70 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms